LOCUS       XM_039097125            2223 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus receptor accessory protein 2 (Reep2),
            transcript variant X2, mRNA.
ACCESSION   XM_039097125
VERSION     XM_039097125.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097125.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2223
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2223
                     /gene="Reep2"
                     /note="receptor accessory protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 26
                     ESTs, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 59 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:682105"
                     /db_xref="RGD:1586980"
     CDS             332..1201
                     /gene="Reep2"
                     /codon_start=1
                     /product="receptor expression-enhancing protein 2 isoform
                     X2"
                     /protein_id="XP_038953053.1"
                     /db_xref="GeneID:682105"
                     /db_xref="RGD:1586980"
                     /translation="MVSWIISRLVVAPQTTDALEIRPLLLSTQGMAQNWEEDWPSNHA
                     CLPRLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIILSWFPFY
                     FELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMRVGK
                     RGLNLAANAAVTAAAKGVLSEKLRSFSMQDLTLIRDEDALPLQGPDGRLQPGPVGLLD
                     TIEDLGDEPALSLRSSSSQADPRTETSEDDLGDKAPKRTKPIKKVPKAEPPASKTLKT
                     RPKKKSPGGGDSA"
ORIGIN      
        1 tggaaccaaa agggaacccg ccgggactcc agcctccagc ttgaagctca aggaaagtga
       61 acaagcgatt tagaggaagg ctgggcacgg agggtgaagg cgcatgccca ggcacagcag
      121 gtgctggggg ggcgcgccga caccgcggcc tcccctttaa gaggcgccac cgcccacggt
      181 ccgccgctgc ggcagggacc tcccctttaa cggcggcaac tccgcgctcc gctgacccca
      241 cggcggctgc cgctgctaac agcagctcct gctgcctcag ccgccggcct cgggcagctg
      301 catcctcacc cgggctgggt cccgccccgc catggtgtcc tggatcatct ctcgcctggt
      361 ggtagctcct cagacaaccg atgctttgga gatccgtccc ttgctcctta gcacccaggg
      421 gatggcacag aactgggagg aagactggcc cagtaaccat gcctgcctcc ctaggctcat
      481 ctttggcacc ctgtacccag cctattcttc ctacaaggcc gtgaagacga aaaacgtgaa
      541 ggaatatgta aaatggatga tgtactggat agtcttcgcc ttcttcacca cagcggagac
      601 acttacggat ataatactgt cctggttccc cttctacttt gagctcaaga ttgcttttgt
      661 gatatggctg ctgtccccgt acaccaaggg ctccagcgtt ctctaccgca agttcgtgca
      721 tccaacactg tccaacaagg aaaaggaaat cgacgaatac atcacgcaag cccgagacaa
      781 gagctatgag accatgatga gggtgggcaa gaggggcctg aacctggctg ccaatgctgc
      841 cgtcacagct gctgccaagg gggtgctgtc agaaaagctc cggagtttca gcatgcagga
      901 cctgactctc attcgagacg aggatgcctt accgcttcag gggccggatg gccgcctcca
      961 acccggccct gtgggtctcc tggacactat tgaggactta ggagatgagc ccgccctgag
     1021 tctaaggtca agctcgagcc aggcagatcc ccggacagag acctcagaag atgacctggg
     1081 agacaaggca cccaagagga ccaaacccat caagaaagta cccaaagctg agccaccggc
     1141 ttccaaaacg ctcaagacca ggcccaagaa gaagagtcct ggagggggtg actcagcttg
     1201 agaacttcag cttaccctac ccctccatct gtaggacaaa acaagcactg agaagagctg
     1261 cagccctggc ccctctgaca gtgggccact agccccaagt gtttcagacc cgcaaacccc
     1321 tagatggctg tttccagtac ccccatccca tgaacactcc tctggagggg acttggcaaa
     1381 gaggagattg aggacagacg tgatgactaa gcccttgagg tggaggctct gtggccagca
     1441 ctgctcttgc tgctctagtc ccgccctgcc catccagtgc cttgctgacc atggccatcc
     1501 cttctctgag gcctgacctg tcccccgcct ctctcctttg aatgggagta gtggtcacca
     1561 tttagaaaga ccagggaggg ggccttgaga aggggaagaa acggagcggg tctgggagga
     1621 gtgggtctgg gaggagggtg ttttcgaggg cacagctctg agtggagaca cgagttttca
     1681 atatccagca tggccttgcc agtactgcag ctggtagggc tgtgcattct acaaaagagg
     1741 tgagattccg aggctgtgcg tgctgggaag gttgggtgta aggggtcgcc tcctccctac
     1801 ttcagccctg gtctttcttc ctctttaccc acccatgttg gtctctgaac ctcaggactc
     1861 aagcctttga cagaaagagg ctccaagggg cctctcccta cccttccacc cttgatccct
     1921 ttcacacatt catgcccaca ggttggactc ctctactcct aggctccact gcagaggccc
     1981 tgccaagctg gcttctttcc tctcctgtaa aggggaccca tcccaccttg ccacggggtc
     2041 cccttcctgt gccaagcaaa cccctgtcag aaccaacccc tggccccggt tctgccagcc
     2101 tcaatggggc caagtggaac ctgtgaaggg aaagaaatgc aggagctgag gctcccaatt
     2161 tcatggtgcc cactggacct tggcactgga tgagccaata aacgaagctc tgacacctcc
     2221 ttt
//
