LOCUS       XM_039080603             750 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus retinol dehydrogenase 9 (Rdh9), mRNA.
ACCESSION   XM_039080603
VERSION     XM_039080603.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086025) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..750
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..750
                     /gene="Rdh9"
                     /note="retinol dehydrogenase 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:503146"
                     /db_xref="RGD:1561812"
     CDS             1..750
                     /gene="Rdh9"
                     /codon_start=1
                     /product="retinol dehydrogenase 16-like"
                     /protein_id="XP_038936531.1"
                     /db_xref="GeneID:503146"
                     /db_xref="RGD:1561812"
                     /translation="MTSACETQTYFSGLQINKDAPCFHHLFLKSEKAESLKRDCWLIP
                     RTLGLVTNAGISIPTGPSEWLNKQDFASVLDVNLLGVIEVTLSMVPSVRKARGPVVNI
                     ASVMDRVSSFGGGYCISKYGVEAFSDSLRRELSYFGVKVAIVGPGFFRTNMSNSAILS
                     SNFQMLWDETSSEVREVYGENYLASCLIRLKRLDQRCSKDLSLVTACHPRTRYSAGWD
                     AKIIYLPMIYVSTFLVDAFVYWTSPKPEKAL"
ORIGIN      
        1 atgacatcag cttgtgaaac acaaacgtac ttttctggcc tccagattaa caaagatgca
       61 ccatgtttcc accacctgtt cctaaagagt gagaaggctg agtccctaaa gagggactgc
      121 tggctgattc ccaggacttt gggcctggtc accaatgctg gcatctccat ccccacgggt
      181 cccagtgagt ggctgaacaa acaggacttt gcaagtgtgc tggatgtgaa cctgttgggc
      241 gtgatcgagg tgactctgag catggtgccc tcagtgagga aggcgagggg ccccgtggtc
      301 aacattgcca gtgtcatgga ccgagtctct tcctttggtg gtggttactg catctccaag
      361 tatggtgtag aggccttctc agactccctc aggagagagc tctcctattt tggggtcaag
      421 gtggctattg tagggcctgg cttcttcagg accaatatgt ccaacagtgc catattatca
      481 tcaaacttcc agatgctgtg ggacgagacc agttcagaag tcagggaagt ctatggcgag
      541 aactacctgg catcttgtct gataaggcta aagagattag accagaggtg cagcaaggac
      601 ctgtctctgg tgactgcctg tcaccctcgc acccggtact cagctggttg ggatgccaag
      661 atcatctacc tccccatgat ctacgtgtcc acctttcttg tggatgcctt tgtctactgg
      721 acttctccaa agcctgagaa agccttgtga
//
