LOCUS       NM_001134560            1247 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus RD3 like (Rd3l), mRNA.
ACCESSION   NM_001134560 XM_001072382 XM_234558
VERSION     NM_001134560.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1247)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474034.2.
            
            On or before Sep 4, 2008 this sequence version replaced
            XM_001072382.1, XM_234558.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC158708.1, EV766758.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132291, SAMD00132302
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1247
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q32"
     gene            1..1247
                     /gene="Rd3l"
                     /gene_synonym="RGD1305627"
                     /note="RD3 like"
                     /db_xref="GeneID:314467"
                     /db_xref="RGD:1305627"
     exon            1..392
                     /gene="Rd3l"
                     /gene_synonym="RGD1305627"
                     /inference="alignment:Splign:2.1.0"
     exon            393..695
                     /gene="Rd3l"
                     /gene_synonym="RGD1305627"
                     /inference="alignment:Splign:2.1.0"
     CDS             400..984
                     /gene="Rd3l"
                     /gene_synonym="RGD1305627"
                     /note="retinal degeneration 3-like"
                     /codon_start=1
                     /product="protein RD3-like"
                     /protein_id="NP_001128032.1"
                     /db_xref="GeneID:314467"
                     /db_xref="RGD:1305627"
                     /translation="MPFFSWVKWPKPYSDKQARHTGSEAVTKTLLRELKWHLRERERL
                     MNEIEDEQKVKRTGVDYNWLRSYQTPRTIPATEQRQLEVLCSQVQPCQTGTVLSRFRE
                     LLAENDVLPWEIVYIFKQVLKDFLSSPDRGGLHAGLWDSDSTCSPALPGESSEGPDKD
                     EIPTISSYVDRNAKNRFPSCSHRAWNLPYYHPPS"
     exon            696..1247
                     /gene="Rd3l"
                     /gene_synonym="RGD1305627"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcctcggca gcgagagcat ctgtggtgcc tcagacgcct gcctttcact ccattcctag
       61 agacgttgca acatgcattt gggatcagca tgcatagctg tcagcgtctt tttcaaagaa
      121 aataagctac agtcaaaagg cagacagttc tctgactcat gaagatggaa ggttatatat
      181 acataaatgt ctctccagtg aagacgactg agcctcactc ctaacacaca aagttgtttg
      241 tttcaaacac agttccagtg ggcaaacgag gagacattcc ttccctgggg gacaccccca
      301 ggagaatgag acccacctga gagaaacacg gcttcgtccc caacttgggc aaactccggc
      361 aacattccca cagcagacct ctgtctcggc agcctaaaaa tgccattttt tagctgggtg
      421 aaatggccaa aaccttattc cgacaaacaa gcacgccaca ctggctcgga ggcggtgaca
      481 aagactctgc ttcgggagtt aaagtggcat ctcagggagc gtgagaggtt aatgaacgag
      541 atcgaagatg aacagaaggt gaagaggaca ggtgtagact acaactggct gagaagctac
      601 cagactcctc gcacaatccc agctaccgag caaagacaac tggaagttct ttgctcacaa
      661 gtacaacctt gtcaaaccgg aactgttctc agcagatttc gagaactttt ggcagaaaat
      721 gatgtacttc cctgggaaat tgtctacatc ttcaagcaag ttctgaaaga cttcctcagc
      781 agccctgaca gagggggtct tcatgctggc ctgtgggact ctgacagcac ctgttcccct
      841 gcgctcccag gtgaaagctc tgaggggcca gacaaagatg agatacccac gatttcaagt
      901 tatgtagaca gaaatgccaa gaacaggttt ccatcatgtt cacacagagc atggaacctg
      961 ccgtattatc acccgccgag ctaaggagtt agcaagagca cctcagagtc atgcccctca
     1021 gcactgacgg gaagaaactg tcgcatgacc ccgggtttct ctgctacagc gtcagggttt
     1081 agttaaaatt cctgtgcctc cagcctctct aagcagtact gttttctaac cactggaaat
     1141 agtcaacatt ttaatgaaaa tatgctttta actaaaatac tgtccaaatg tctgaagttt
     1201 cttatacccc aaacatgtca cagaactaaa gaaatttact atgaagt
//
