LOCUS       NM_001134985            1869 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus REST corepressor 3 (Rcor3), mRNA.
ACCESSION   NM_001134985 XM_001069334
VERSION     NM_001134985.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1869)
  AUTHORS   Upadhyay G, Chowdhury AH, Vaidyanathan B, Kim D and Saleque S.
  TITLE     Antagonistic actions of Rcor proteins regulate LSD1 activity and
            cellular differentiation
  JOURNAL   Proc Natl Acad Sci U S A 111 (22), 8071-8076 (2014)
   PUBMED   24843136
REFERENCE   2  (bases 1 to 1869)
  AUTHORS   Florea L, Di Francesco V, Miller J, Turner R, Yao A, Harris M,
            Walenz B, Mobarry C, Merkulov GV, Charlab R, Dew I, Deng Z, Istrail
            S, Li P and Sutton G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC169033.1.
            
            On Sep 16, 2008 this sequence version replaced XM_001069334.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169033.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760434 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1869
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q27"
     gene            1..1869
                     /gene="Rcor3"
                     /note="REST corepressor 3"
                     /db_xref="GeneID:684192"
                     /db_xref="RGD:1593864"
     exon            1..321
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     CDS             162..1817
                     /gene="Rcor3"
                     /codon_start=1
                     /product="REST corepressor 3"
                     /protein_id="NP_001128457.1"
                     /db_xref="GeneID:684192"
                     /db_xref="RGD:1593864"
                     /translation="MPGMMEKGPELLGKSRSANGGAKSPAGGGGSSANGGLHFSEPES
                     GCSSDDEHGDVGMRVGAEYQARIPEFDPGATKYTDKDNGGMLVWSPYHSIPDAKLDEY
                     VAIAKEKHGYNVEQALGMLFWHKHNIEKSLADLPNFTPFPDEWTVEDKVLFEQAFSFH
                     GKSFHRIQQMLPDKTIASLVKYYYSWKKTRSRTSLMDRQARKLANRHNQGDSDDDVEE
                     PHPMDGNDSDYDPKKEAKREGNSEQPVQTSKIGLGRREYQSLQHRHHSQRSKCRPPKG
                     MYLTQEDVVAVSCSPNAANTILRQLDMELISLKRQVQNAKQVNSALKQKMEGGIEEFK
                     PPESNQKINARWTTEEQLLAVQGVRKYGKDFQAIADVIGNKTVGQVKNFFVNYRRRFN
                     LEEVLQEWEAEQGTQASNADTSALGEETKSASNVPSGKSTDEEEEAQTPQVPRTLGPS
                     PPAPSSTPTPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTPNQPP
                     PPLIRPANSMPPRLNPRPVLTTVGGQQPPSLIGIQTESQPSLH"
     exon            322..378
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            379..456
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            457..509
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            510..671
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            672..796
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            797..875
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            876..1094
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            1095..1172
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            1173..1230
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            1231..1472
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
     exon            1473..1841
                     /gene="Rcor3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggaggcgggg ccggggcggg ctggtgtggg gcgactgcgc tacggcccga ccggggcggt
       61 gatggcggct ccatattaac acctcctcct cctcctccaa cgcgctcccg cccgccagcc
      121 gtctccccct tccctgacgc cacctctccc cctcctctac catgcccggc atgatggaga
      181 aagggcccga gttactgggg aagagccgat cggccaacgg cggcgccaag agcccggcgg
      241 gcggcggcgg ctcctcggcc aacggcgggc tgcacttctc ggagcccgag agcggctgca
      301 gcagcgacga cgagcacggg gatgttggga tgagagtcgg agctgaatac caagctcgga
      361 tccctgaatt cgatccaggt gctaccaagt acacagataa agacaatgga ggcatgcttg
      421 tgtggtctcc ttatcacagt atcccagatg ccaaattgga tgagtatgtc gccattgcaa
      481 aggagaaaca cggctacaat gttgaacagg cacttggcat gttgttctgg cacaagcaca
      541 acattgagaa gtcccttgcg gacctcccta atttcacgcc ctttccggat gagtggacag
      601 tggaagacaa agtcctgttt gaacaagcct ttagtttcca tgggaagagc ttccacagga
      661 tccagcaaat gcttccagat aagacaattg caagtcttgt aaagtattac tattcttgga
      721 aaaaaactcg ctcaaggaca agtttgatgg accggcaggc tcgtaaacta gccaacagac
      781 acaatcaagg tgacagtgat gatgatgtgg aagaacctca ccccatggat gggaacgaca
      841 gcgactatga cccaaagaaa gaagccaaga gagagggtaa ctctgaacag ccagtccaaa
      901 cgagcaagat aggcctgggg aggagagagt accagagtct gcaacaccgt catcactcgc
      961 agcgctccaa gtgccgccct cctaagggca tgtatctaac ccaggaggat gtggtggctg
     1021 tttcctgcag tcccaacgca gccaacacca tcctgaggca actggacatg gagctgatct
     1081 ctctcaagcg ccaggttcag aatgctaagc aagtaaacag tgcgcttaag cagaaaatgg
     1141 aaggtggaat tgaagagttc aaaccgcctg agtcaaatca gaaaattaat gcccgttgga
     1201 ccacagagga gcagcttcta gcagtgcaag gtgtccgcaa atatggtaaa gattttcaag
     1261 ctattgcaga tgtaattggc aacaagactg ttggccaagt gaagaacttc tttgtaaact
     1321 acaggcgtcg gtttaactta gaggaggtat tgcaggagtg ggaagcagaa caaggaaccc
     1381 aggcttctaa tgctgatact tctgctttag gggaggagac aaaaagtgct tctaatgtgc
     1441 cgtcagggaa gagcactgac gaagaagagg aggcacagac cccacaggtt cctcggactc
     1501 tgggtccatc acctcctgcc ccatcatcca ctccaacacc aacagccccc attgccactc
     1561 tgaaccagcc gccaccactt cttcgtccaa cactgcctgc cgcccctgct cttcaccggc
     1621 aacctcctcc tctccagcag caggctcggt tcatccagcc ccggccaact cccaatcagc
     1681 ctccaccacc tctcatccgc cctgctaact ccatgccacc ccgcctaaac ccgaggccag
     1741 tgctgaccac ggtgggtggt cagcagccac cttcactcat tgggattcag acagagtcac
     1801 agccttcact gcactaatta cactggacaa attctcacct aaaaaaaaaa aaaaaaaaaa
     1861 aaaaaaaaa
//
