LOCUS       XM_039110012            3110 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus REST corepressor 2 (Rcor2), transcript
            variant X2, mRNA.
ACCESSION   XM_039110012
VERSION     XM_039110012.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3110
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3110
                     /gene="Rcor2"
                     /note="REST corepressor 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 18
                     ESTs, 1 long SRA read, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 63 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:305811"
                     /db_xref="RGD:1359467"
     CDS             268..1968
                     /gene="Rcor2"
                     /codon_start=1
                     /product="REST corepressor 2 isoform X2"
                     /protein_id="XP_038965940.1"
                     /db_xref="GeneID:305811"
                     /db_xref="RGD:1359467"
                     /translation="MPSVMEKPSAGSGILSRSRAKTAPNGGQPHSEDDSSEEEHSHDS
                     MIRVGTNYQAVIPECKPESPARYSNKELKGMLVWSPNHCVSDAKLDKYIAMAKEKHGY
                     NIEQALGMLLWHKHDVEKSLADLANFTPFPDEWTVEDKVLFEQAFGFHGKCFQRIQQM
                     LPDKLIPSLVKYYYSWKKTRSRTSVMDRQARRLGGRKDKEDSDELEEGRGAVSEGEPD
                     TGDPKREPLPSRPLNARPGPGKKEIQVSQYRHHPLRTRRRPPKGMYLSPEGLTAVSGS
                     PDLANLTLRGLDSQLISLKRQVLGIKLRSELVAGKGVPDVTCMYMIYVSAACVPWCPC
                     ASFYLYVQSMKQTNSSLRQALEGGIDPLRPPEANTKFNSRWTTDEQLLAVQAIRRYGK
                     DFGAIAEVIGNKTLTQVKTFFVSYRRRFNLEEVLQEWEAEQDGAPTAPVPVEEARRGA
                     PVPATALEEDDEVQITSVSTSVPRSVPPAPPPPPPPTSLSQPPPLLRPPLPTAPTLLR
                     QPPPLQQGRFLQPRLAPNQPPPPLIRPALAASRHSARPGPQPPPTLVGAQLEPPAPSL
                     "
ORIGIN      
        1 gcatagcggg tgtgcccggg tagaggcgtg tccaggagtc cgggctcccc gtgggaggga
       61 cggcgggcgg gggctccggc ctgtgtgagc tgcagcacgt gccccaggcg gcggggacgg
      121 gcacaggcgc agctcacagg cttcgagctg ctgccgcctc actggcgacc cctccaggcc
      181 gggccgggcg cagcactcca ggcaagcgcg gcaagctcct gcgctctcca aaggatcccg
      241 tgccccccgg ggcagcaggg aagggtaatg ccctctgtaa tggagaagcc cagtgcgggc
      301 tccgggatct tgtcccgaag tcgggccaag acggcaccca acggcggaca gccgcactcg
      361 gaggatgaca gcagcgagga ggagcactct catgacagca tgatccgagt tggaaccaat
      421 taccaagcag taattccgga gtgcaagcct gagagccctg cgcgctacag caacaaggag
      481 ctgaagggga tgctggtgtg gtcacccaac cactgtgtat ccgatgccaa gcttgacaag
      541 tacattgcga tggccaagga gaagcatggc tacaacattg aacaggcact tggcatgctt
      601 ctgtggcaca aacatgacgt ggagaagtca ctggctgatc tagccaactt cactcccttc
      661 cctgatgagt ggacggtaga ggacaaagtg ctgttcgagc aggcctttgg gttccatggc
      721 aagtgcttcc agcggatcca gcagatgctc cctgacaagc tgatccccag cctggtgaag
      781 tattactact cttggaagaa gacccgaagt cgaactagtg tgatggacag gcaggccagg
      841 cggctgggtg gccgcaagga caaagaagac agtgatgagc tagaagaggg acgaggagct
      901 gtgagcgagg gagaaccgga taccggggac cccaagcgag agcctctgcc atccagacct
      961 ctgaacgcac ggcctggtcc tgggaagaaa gagatccagg tatctcagta ccgccaccac
     1021 ccacttcgaa ctcggagacg tccgcccaag ggcatgtacc tgagtcctga aggcctcact
     1081 gcagtatcgg gaagcccaga ccttgctaac ctcacactcc gaggtctcga ctcacagctc
     1141 atctctctta agcgccaggt actggggatc aaactcaggt cagaactggt ggcaggaaag
     1201 ggtgtgccag atgtaacatg catgtatatg atatatgtgt cagcagcatg tgtgccatgg
     1261 tgcccatgtg cttctttcta cctttacgtt cagagcatga agcagaccaa cagcagcctc
     1321 cgccaagcac tggagggtgg catcgaccct ctccgccccc ctgaggccaa taccaagttc
     1381 aactcccgct ggaccacaga tgagcagctt ctggctgtac aagcgattcg tagatatggc
     1441 aaagactttg gggctattgc agaggtgatt gggaacaaga ctctgaccca agtgaagacc
     1501 ttctttgtga gctaccgtcg ccgcttcaac ctggaagagg tgttgcagga atgggaggct
     1561 gagcaggatg gggcccccac agctccagtc cctgtggaag aggccaggcg aggggctcct
     1621 gtaccagcca cagccctgga agaagatgac gaggtccaga ttacatctgt ctcaacatca
     1681 gtaccccgat cagtaccccc tgctccgccc ccacctccac cacccacctc gctttcccag
     1741 cctcctccac tgctgaggcc acctctgccc acagctccca cactgctccg ccagccacct
     1801 cccctgcagc agggccgctt cctgcagccc cggctggccc ccaaccagcc tccaccacct
     1861 ctcatccgcc ctgccctggc tgcctctcgc cacagtgccc gccctggtcc tcagccccca
     1921 cctaccctgg ttggagccca attggagccc cctgcaccct cactttgagc cctgaatcct
     1981 ccactgccca ggggctcctg aaccccttgg ctgggtatct ctggcagcac taaggataga
     2041 agggactagg gctcttgcca ggtctttcaa atacccagag ctgccagctg gcacagcttg
     2101 gacctgtggg ttctgcatgt gttcctggca gttgagcttg taaaccccca gccaggggct
     2161 agatctcagg gcctgcaggg actctggctt cctggctgtg actggaatgg ctgcctcctt
     2221 gcctgcctgc ctgcctgcct ttggagggct tggcctctgg gcctaccctt tgtgtgtggt
     2281 agtgactgag cctgggggct gagggagagc tggtgtgtta gctggcctca cccacctttc
     2341 cttcctttta gcaataagtc aggtgcagtg gaaggggact ggggtgggca tggcagaagc
     2401 cttgtgggaa gaatgttggg aagctgtgag gaggcccact ctgtccaccc ccaaaagctt
     2461 ggagaaagaa gggttgggga cttacacaga catgggttta tttttcaaca ttttttaaaa
     2521 agaaataaat gcaaccttaa atgtatgagt ctttcatgtg tgctgtgggt gtgaggtaac
     2581 tggccaccca gcattagcct ccaccaggac ctagacagta accaattctc ttctgccagg
     2641 caggcaggcg ggcgggctga gccacatctt gcccaggggt ggggggtggg gactgggtcc
     2701 ccgcccagca gggagaagga acaggaggca gcagctcaga ttccaaacat tctctttatt
     2761 acgtgtttga tccagaggag aaactaagtg cagggtgggg aagagggggc taggcaggga
     2821 ggggccacct tgcctgggtg tcctggcccc caccccttat cttgggagcc aagccatgcc
     2881 ctcctggccc cctttggagc acccgggctg ttccgtaggg caagagggga aaggagaagc
     2941 ccttggtctg agccatagcc agtggagcac ggggctggag ggttgaggtt ggcaaggttt
     3001 cttcctggaa cccaagactc aacgtgttgg tgagcctgac ctggcttggg agccagggtg
     3061 atgaacaggg gtgggagtga caagacgaca actggggcaa agagtggagt
//
