LOCUS       XM_039079401            1414 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Ras converting CAAX endopeptidase 1
            (Rce1), transcript variant X7, mRNA.
ACCESSION   XM_039079401
VERSION     XM_039079401.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039079401.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1414
                     /gene="Rce1"
                     /note="Ras converting CAAX endopeptidase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 2 long SRA reads, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 133 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:309153"
                     /db_xref="RGD:1309261"
     CDS             310..1017
                     /gene="Rce1"
                     /codon_start=1
                     /product="CAAX prenyl protease 2 isoform X7"
                     /protein_id="XP_038935329.1"
                     /db_xref="GeneID:309153"
                     /db_xref="RGD:1309261"
                     /translation="MGFRLEGIFPAALLPLLLTMILFLGPLMQLCMDCPCDLTDGLKV
                     VLAPRSWARRLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTCPLFFGV
                     AHFHHIIEQLRFRQSSVGSIFLSAASVSSVPVLLHRCLRCLYGFPLHPHRTPDRAGSL
                     PLLLQLHGLPCCVCSPGASTEVATAGGLCPWCGTLPASASTPDRPQALWQPSSLYAFG
                     TNGGLRDPTVLLTITLV"
ORIGIN      
        1 gatggcggcg ctgggcgggg acgggctgcg tttactgtcg gtatcgcggc cagagcggca
       61 gcccgagtca gccgcgttga gcagcccggg cccagggctg tgctgctggg tgtctgtgtt
      121 ctcctgcttc agcctcgcct gctcctacgt gggcagcctc tacgtgtgga agagcgagct
      181 gcccagggac caccccgctg ttatcaagcg gcgtttcacc agtgtcctgg tagtatcgag
      241 cttgtcccca ctttgcgtgc tgctctggag ggaactcact ggcatccagg cacatcactg
      301 cttaccttga tgggcttcag gctggagggc atttttccag cagctctgct gcccctgctg
      361 ctaactatga tccttttcct gggtccactg atgcagctct gtatggattg cccgtgtgac
      421 ctgacagatg ggctgaaggt tgtcctggcc cctcgttctt gggcccgccg cctcacagac
      481 atgcgctggc tacgaaacca agttatagca cccttgacag aggagctggt gttccgggct
      541 tgtatgctgc ccatgctagc accatgcaca ggtctgggcc ctgctgtgtt cacctgccca
      601 ctgttttttg gagtcgccca ttttcaccac attattgagc agctgcgctt ccgccaaagc
      661 agtgtgggaa gtatcttctt gtctgcagcc tccgtctcca gcgttccagt tctcctacac
      721 cgctgtcttc ggtgcttata cggctttcct cttcatccgc acaggacacc tgatagggcc
      781 ggttctctgc cactccttct gcaactacat gggcttccct gctgtgtgtg cagccctgga
      841 gcatccacag aagtggccac tgctggcggg ctatgccctt ggtgtgggac tcttcctgct
      901 tctgcttcaa cccctgacag accccaagct ctatggcagc cttcctcttt gtatgctttt
      961 ggaacgaacg ggggcctcag agaccctact gtgctcctga ccatcactct tgtgtgaact
     1021 ctgatgggct ctccagcccc ttcttatcaa tactgcgaga gaggggctgg ctggggtccc
     1081 cgagatctca ggaatttttg taggggattg aagccagagc tagttgaatc ccagggacca
     1141 agagaaagga gcagatatcc aaagggtgca gcccctcgtg atggggcgga tgagcagcaa
     1201 ctggaagtga ggggacaagg gcaaatccta ggagctgtgc actccctctt tggattgatg
     1261 cttctctagc tcctttgcgt ctccccttct cccttgaaaa gctgctgggg tgggtttatt
     1321 tatcaaaccc ctcctcccaa cttcccaggg ttttctcatt gtctttttgc atcaagactt
     1381 tgtattggga tattaaagag atttaacttg ggta
//
