LOCUS       XM_006229455            2356 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RCC1 domain containing 1 (Rccd1),
            transcript variant X2, mRNA.
ACCESSION   XM_006229455
VERSION     XM_006229455.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006229455.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006229455.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2356
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2356
                     /gene="Rccd1"
                     /note="RCC1 domain containing 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1 EST,
                     1 long SRA read, 5 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     46 samples with support for all annotated introns"
                     /db_xref="GeneID:308760"
                     /db_xref="RGD:1309901"
     CDS             819..1955
                     /gene="Rccd1"
                     /codon_start=1
                     /product="RCC1 domain-containing protein 1 isoform X1"
                     /protein_id="XP_006229517.1"
                     /db_xref="GeneID:308760"
                     /db_xref="RGD:1309901"
                     /translation="MAEKRQGAWFGFGFCGFGQALGSGNGQHAVHSPEPLHAADDVCQ
                     VSASWSYTALVTRGGRVELSGSVSCAADGCRDVWASEGLLVVQRNKSGSGTELQAWVP
                     GSALQGEPLWVQNLASGAKAQGEDEPGSEPRMGTLPLLPCARAYMTPQPPFCQPLAPE
                     LRVRQLQLGAEHALLLCEAGQVFSWGGGRHGQLGHGSLEAELEPRLLEALQGLRMAEV
                     AAGGWHSVCVSETGDIYIWGWNESGQLALPTRSGTEKKTVREEATELNDDGLRGEEAA
                     LADVGAPAHFIAIQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQL
                     GHKDSTSSDQPCRVEYFVERQLEVRAVTCGPWNTYVYAVERENI"
ORIGIN      
        1 taggggttgg ggatttagct cagcggtaga gcgcttgcct agcgagcaca aggccctggg
       61 ttcggtcccc agctccgaaa aaaaagaaaa ggaaaaaaaa aaaaagtagt gggaattaca
      121 gttgccgtca cccagcctgg gttctttgta cgccctggtg agttagcctg aagcttagga
      181 aacatatttc aatgtgttat gctgaccctt ggacacattt atcatgatat tgtgagtttt
      241 ctgtgatctc tactaggtct gtgtttggga tttggggttg gtgtgccctt ctctcgggaa
      301 aaatatgttt ctgtagctgt gtcttactga aggagaagcg cggcccaaat aggatctctg
      361 gctgagaacg cctgtctctt agaggggtcc aaacttggga ctcattggct cagtagaagt
      421 aaatgacaga gcctgggcca atcagtgaag gcactaatac taccgcttcc tgtctggata
      481 tcagtcctaa gcttgttcag taggaaccgc ctccttcctt gttcaaaggg aatggaagga
      541 gtcaggattt ggtctgtgcc caccgttccc ctcggatctt cctgagtatt cagtggttcc
      601 aaccgcgtcc actgtcggcg cccatcggag acttcggcac actgtccgga gcagcccgaa
      661 ttggcttggc aaagggcaga taacgcggct gcagcccctt gaaggcgaga ttcgccagtg
      721 ttcctgaggt gtcctgttcg tgagactctc cttgggttgt agccttaatc ttgcacccca
      781 gccaagtggc cgccacccac agaggcctca acctgaacat ggccgagaaa cggcaaggag
      841 cctggttcgg ctttggtttc tgtggctttg ggcaagcgct gggctctggg aacggccaac
      901 atgcagtgca cagtcctgaa ccactgcatg ctgctgacga tgtttgccaa gtgagcgcaa
      961 gctggagcta cactgccctg gtgactcgcg gaggccgggt ggaactgtca ggctctgtga
     1021 gctgtgcagc agacggctgc agggatgtgt gggcgtcgga gggactcctg gtggtgcagc
     1081 gcaacaagag tgggtccggc acggaactgc aggcctgggt accaggttcc gcgctacagg
     1141 gggagcccct ttgggtccag aacttagctt ctggggcaaa ggcccaaggg gaagatgaac
     1201 ccggcagtga gcctaggatg gggacgctgc cgttgctgcc ctgcgcccgt gcctatatga
     1261 ccccacagcc tcccttctgc cagcctctgg ccccagagct gcgggtgcgc cagctgcagc
     1321 tgggtgcgga gcacgcgctg ctgctgtgcg aagctggcca ggtgttctcc tggggcgggg
     1381 gcaggcatgg acagctgggt cacgggtcgc tggaggcaga actagagcca aggctgttgg
     1441 aggcactgca aggcctacgg atggctgagg tggccgcagg tggctggcac tctgtgtgtg
     1501 tgagtgaaac tggggatatt tatatctggg gttggaatga gtcagggcag ctggccttgc
     1561 ccacaaggag cgggacagag aagaaaacag tgagagagga agccacagaa ttgaatgacg
     1621 atggtctcag aggagaggaa gcagctctgg ctgatgttgg agctcctgcc cacttcatag
     1681 ctatccagcc cttcccagct ctcctggatc ttcccctggg ctcagatgca gtcaaggcca
     1741 gttgtggatc ccgacacaca gctgtggtga cacgaacagg agaactctat acctggggct
     1801 ggggtaaata tggacagctt ggccacaagg acagcaccag ctcggaccag ccctgccgtg
     1861 tggaatactt tgtagaaaga caacttgaag taagggctgt tacatgtgga ccctggaata
     1921 cctatgtcta tgcagtggag agagagaaca tctgaactat atctcaggtg gatccccagg
     1981 ctgcttatgt acctgggtga gaatgaactc ttgcttcaac atgctgtcct gggtgcatgg
     2041 aaacaaggcc acagcgatct ccccgcctcc tcagtgctgg gattaaaggt gcatgcagac
     2101 ttaagaatgt gtgtctaggg gttggggatt tagctcagtg gtagagcact tgcctagcaa
     2161 gagcaaggcc ctgggttcgg tccccagctc cgggaaaaaa aaagaaaagg aaaaaaaaaa
     2221 aaaagaatgt gtgtctaact gcttatttct ggagtagtgc cagggatcca tgtgcatcaa
     2281 cagcttagct ataccaccca gaggcttaaa cctgagaaaa tattcccaaa tgaaaataaa
     2341 gagtaaatcc aaacta
//
