LOCUS       XM_039111332            3849 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus regulator of chromosome condensation 2
            (Rcc2), transcript variant X2, mRNA.
ACCESSION   XM_039111332
VERSION     XM_039111332.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111332.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3849
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3849
                     /gene="Rcc2"
                     /note="regulator of chromosome condensation 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 122 ESTs, 8 long SRA reads, 6 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 90 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:298594"
                     /db_xref="RGD:1309986"
     CDS             294..1856
                     /gene="Rcc2"
                     /codon_start=1
                     /product="protein RCC2"
                     /protein_id="XP_038967260.1"
                     /db_xref="GeneID:298594"
                     /db_xref="RGD:1309986"
                     /translation="MPRKKGAAWEEPSSGNGTARAGPRRRGGPAGRKRERPERCSSSS
                     GGGSSGDEDGPELDGAPGGGKRTARPATAGKASGAAAIITEPEHTKERVKLEGSKCKG
                     QLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHS
                     LLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDT
                     GSVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLMDCKGNLYSF
                     GCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA
                     CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQIYAGYT
                     CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTIS
                     WGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEKER
                     LQRLPEYTPRTL"
ORIGIN      
        1 cgacgaatca aatctaccct gcgtctgcct aggagaaagt tactcaaatt gtattcatct
       61 ttcattccga tcgctcaacg agggcacgtc cctcgttggc tgctgcgtga gcaaagcaac
      121 tattttccag cgagtgtcct cagcatttgt tctggaagct cgtatttaca ttttaagtgt
      181 atctggtgag tgggctggag ccctcgtccg ggccggggag agaagaagcc ctcgaccccc
      241 gtctttcagt cgctcccctc ctcgtttctc atcactccaa ccagcccgcg accatgccca
      301 ggaagaaggg ggcggcttgg gaggagccga gttcgggcaa cggcacggca cgcgcggggc
      361 cccggcggcg cggcggcccc gcgggcagga agcgcgagcg gccggagcgc tgcagcagta
      421 gcagcggcgg cggcagcagc ggcgacgagg acggcccgga gctggacggg gcccccggcg
      481 gcggcaagcg cacagccagg ccggcgacag cgggcaaggc gtccggcgcg gccgcgatta
      541 tcacggagcc tgagcacacg aaggagcgcg tcaaacttga agggtctaag tgcaaggggc
      601 agcttttgat ctttggggca accaactggg acttgattgg acgaaaggaa gtgcctaaac
      661 agcaagctgc ttaccgcaac cttggtcaga atttgtgggg gccccatagg tatgggtgcc
      721 tgtcaggagt ccgggtgcga accgtggttt cgggctcctg tgctgcccac agccttctca
      781 tcaccacaga agggaagctc tggagctggg gtcggaatga aaaggggcag ctgggccatg
      841 gtgataccaa gagggtggaa gcccccagac tcatcgaggc tctcagccat gaggcaattg
      901 tgctggctgc gtgtgggcgc aaccacaccc tggcgttaac agatactggc tctgtcttcg
      961 ccttcggaga gaataagatg gggcagctgg gcctcgggaa ccagacagat gctgttccaa
     1021 gtcctgccca gattatgtac aatgggcagc caattaccaa gatggcctgc ggggcagagt
     1081 tcagcatgct gatggactgt aaagggaacc tctactcctt cgggtgccct gaatatggcc
     1141 aactgggaca caactcagat gggaagttca tcgcccgggc gcagaggata gagtatgatt
     1201 gtgagctggt gccccggaga gtggccatct tcatcgagaa gaccaaggac gggcagattt
     1261 tgcctgtccc caacgtggtg gttcgagacg tagcctgtgg cgctaaccac acactggtcc
     1321 tggattcaca gaagcgagtc ttctcctggg gctttggtgg ctacggccgg ctgggccatg
     1381 ccgagcagaa ggatgagatg gtacctcgcc tggtgaagct cttcgatttc ccgggacgtg
     1441 gtgcaaccca gatctatgcc ggctacacct gctcctttgc tgtcagtgaa gtgggggggc
     1501 tgtttttctg gggggctacc aatacttctc gagagtctac catgtaccca aaagccgtgc
     1561 aggacctctg tggctggcgg atccggagcc ttgcctgcgg gaagagcagc atcatcgtag
     1621 cggccgacga gagtaccatc agctggggcc catcaccaac cttcggggaa ttgggatatg
     1681 gggaccacaa gcccaagtct tctactgcag ctcaggaggt gaagactctg gatggcatct
     1741 tctccgaaca ggtggccatg ggctattcac attcattggt gatagcacga gatgagagcg
     1801 aggctgagaa ggagaggctg cagaggctgc ctgagtacac cccacgcacg ctctgagcag
     1861 cagcaggccg gcactcccct cgtggcagct gtcattccca cgtgcactgg gaccagacgt
     1921 cagacaagga atttaggaag caaaagttga ccaagggtgc attgggttag cctccctgag
     1981 gttccgtttc caagcgattc aacgttaact accttttctg tatgctttcc aaagtgtttt
     2041 ccctcaacgt tgattaaaac atttgctcat agccagcttg cctttctacg agacaggcag
     2101 gagctccggg cggtttaggt ttttttttaa gttgtatttc ttttctcccc tctctcgagt
     2161 acccttgtgc agccctccca ttccagccat aattagcatt gtgatccgag tgggcgccac
     2221 atgggagagg gattgccact ctcccagaca gaaacggccc ttccaggaac cagcagcagc
     2281 taggccaatc cctgcctgcc cgctgtgaga gaccagtcac ttgcttgtgg gcccacccac
     2341 ctgccctctg accccctctc ccccatagct attgctggct tgctgtctgc aaggcccatg
     2401 tgggcctttt ggctgaagca tttgtagaac cagccatctc cccctggtgg ggctctgggg
     2461 tctgtgttta gccatttgta tctcctttag ctctcaagtc caaatgagaa tggggaccat
     2521 ggggtatggg gtgggcagtt agagattggt cagctagcag tcaaatgtgt tctcagtcct
     2581 ctgtgacccg cagttgccgc ctttgcgctt tgcctgtctg ctcctgctgt cccctctgcc
     2641 tgggatggcc accctatcct gagacttggc cattgttctc ccagcctcag tgttctctgg
     2701 ccgctgcttg cgtttgcttg gctctggtac caaatagttg ggattcctga tgaaattccc
     2761 tgccctgcgt gtcagttcag actgtcacca catccccaca agtgccctct gccgagccca
     2821 tcctggcatt gactttgtgg ctgagttcca aggtgccttt cccggatcct cctcactggg
     2881 cccgagtatg acggcagctc gggctggggc cttggtttcc ggagggtctg ggctggtttg
     2941 actgctttaa ctaggattag ttcggtggtg cttgggggaa gggggctaag gatccaagtg
     3001 tgaggtgggg tggatgggaa agtcaagatt ctggccttga gattcatggt tttgcttttg
     3061 ctgttgtgac gctcgtctct gtgttaaaat gccaaaaatg acctggtctg ttgcttcccc
     3121 tgccccaatg ctgcacagca gcttctggct ttgcaaggtg tctgtctcgg ccagtgaccc
     3181 ggcctgccgg aaagggtccg cgttctctct gtctcccgtc acatgtccaa ctctagtcca
     3241 gagacagctt ctgtagtggc agagcttctg caaaactaac ctgctttgcc caggtcaccc
     3301 tagacatcac ccctgccact gacaccggtc actgccacgt gcgggaccgg agcctttcct
     3361 ggtctctgtc tggcgtgtgc tgttcagggt ctgctccttc tgtcctgggg gtctcctgga
     3421 gttagtcgtg tggtcaccaa gaggattgag gacacagtag ccctgagctg aactaggctc
     3481 atcttccagg gagcaaacct aaagccagca gtcagtcccc ttggctggag ccctgcagtg
     3541 ggtgagcaga aagtgtctta tgggtagaga gtcctgtgcc tggccacagc ccccctccct
     3601 tcaggctaaa attctcacct gagctttccc accagaaact caaggtggga agccctgggt
     3661 aggaaccatt ctggcctccc aggggctctg aaattttctg gtcatcgaga aagcgtagcg
     3721 cagagggagt ggacgaggat gggattcggt cgaaggtgcc tggtttagtg ctgttattgt
     3781 ctaatttttt tttatatcta tatttcttgg agtaaacatt ttaaataaac ggcgtcattg
     3841 tttactctg
//
