LOCUS       NM_199084               1971 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RCC1 and BTB domain containing protein 2
            (Rcbtb2), mRNA.
ACCESSION   NM_199084 XM_214224
VERSION     NM_199084.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Wang,J., Teves,M.E., Shen,X., Nagarkatti-Gude,D.R., Hess,R.A.,
            Henderson,S.C., Strauss,J.F. 3rd and Zhang,Z.
  TITLE     Mouse RC/BTB2, a member of the RCC1 superfamily, localizes to
            spermatid acrosomal vesicles
  JOURNAL   PLoS One 7 (6), e39846 (2012)
   PUBMED   22768142
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Devilder,M.C., Cadoret,E., Cherel,M., Moreau,I., Rondeau,G.,
            Bezieau,S. and Moisan,J.P.
  TITLE     cDNA cloning, gene characterization and 13q14.3 chromosomal
            assignment of CHC1-L, a chromosome condensation regulator-like
            guanine nucleotide exchange factor
  JOURNAL   Genomics 54 (1), 99-106 (1998)
   PUBMED   9806834
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC061766.1.
            
            On Jan 1, 2004 this sequence version replaced XM_214224.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC061766.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132262, SAMD00132291
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15q11"
     gene            1..1971
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /note="RCC1 and BTB domain containing protein 2"
                     /db_xref="GeneID:290363"
                     /db_xref="RGD:735048"
     exon            1..28
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            29..111
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            112..205
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            206..270
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     CDS             229..1884
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /note="regulator of chromosome condensation (RCC1) and BTB
                     (POZ) domain containing protein 2; regulator of chromosome
                     condensation and BTB domain-containing protein 2"
                     /codon_start=1
                     /product="RCC1 and BTB domain-containing protein 2"
                     /protein_id="NP_954515.1"
                     /db_xref="GeneID:290363"
                     /db_xref="RGD:735048"
                     /translation="MEEEVPGFYGESGKSVQATLSSLKMLDVGKWPIFSLCSEEELQL
                     IRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDSLTGKKIAS
                     LSYGSGPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACG
                     SYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQMCSM
                     AVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTLVLTDEG
                     QIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAACHSAHTSAAKSQGGHVYMW
                     GQCRGQSVILPHLTHFCCTDDVFACFATPAVTWRLLSVEPDDHLTVAESLKREFDNPD
                     TADLKFLVDGKYIYAHKVLLKIRCEHFRSSLEDSEDDIVEMSEFSYPVFRAFLEYLYT
                     DNISLPPEEAVGLLDLATFYSETRLKKLCQQTIKQGICEENAIALLSAAVKYDAQDLE
                     EFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN"
     exon            271..426
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            427..577
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            578..744
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            745..903
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            904..1011
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1012..1154
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1155..1345
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1346..1472
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1473..1612
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1613..1743
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
     exon            1744..1964
                     /gene="Rcbtb2"
                     /gene_synonym="Chc1l"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cccggagcgg agaggacgcg gcgcggagtc acgttaactt ttttctggaa gacagcttta
       61 caagaatcta gacggaccaa attccaggct ccagaacatt ccagcaacca gcttagcaga
      121 ccatacattc tacaggagct gagaactgat aagtctcttc ttcaccgtga tttgaaactt
      181 tccagtctca gaaaagttga ccaagggact gcacaggact gagtccatat ggaagaagaa
      241 gtacctggtt tctatggaga aagtggcaag tcagtacagg ctaccctgtc gtcgttgaag
      301 atgttagatg tgggaaagtg gccaatcttc tccctttgtt ctgaggaaga gctgcagttg
      361 attcgccagg cttgtgtctt cggcacggct ggcaatgaag ttttatacac tacggtcaac
      421 gatgagattt ttgttcttgg cacaaactgc agtggctgtc tgggggtagg tgacattcag
      481 agcactattg agcctcggag actggattct ttaactggca aaaaaatagc cagcctcagc
      541 tatgggagtg gcccacatat cgtccttgca accacagatg gagaagtctt tacctggggt
      601 cacaatgcat atagccagct gggcaatggg acaacgaacc atggtctagt gccctgccat
      661 atctctacca atctgtcaaa caagcaagtc atcgaggtcg cctgtgggtc ttaccattct
      721 ttggttctaa catctgatgg agaggtattt gcctggggct ataacaactc tgggcaagta
      781 ggatccggat caacagctaa ccagcccatt cctcgaagag tcactggatg tctgcagaat
      841 aaagtagtta tgagcatagc gtgtgggcag atgtgttcaa tggccgttgt ggacaccgga
      901 gaggtctacg tctggggcta caacgggaat gggcagctgg gcctcggcag cagtggcaac
      961 cagccgaccc cgtgcagagt ggcggccctg caaggcatcc gtgtccagcg ggttgcctgt
     1021 ggctacgcac acacattagt gttaacagat gaaggtcaaa tatatgcttg gggtgcaaat
     1081 tcttatggcc agttgggcac tggcaataaa agtaaccagt cctatcctac ccctgttgtt
     1141 gtggaaaagg acagaatcat agagattgca gcctgtcact ctgcccacac atctgctgcc
     1201 aagagccagg gcgggcacgt gtacatgtgg ggccaatgcc ggggccagtc ggtgatcctt
     1261 ccacacctca cccacttctg ttgcactgat gacgtgtttg cctgctttgc cacccctgct
     1321 gtcacctggc gccttctctc cgtggaaccc gacgaccacc tcactgtggc tgagtctctg
     1381 aagagggaat ttgacaaccc tgatactgca gacctcaagt ttctagttga tgggaaatat
     1441 atttatgctc acaaagtcct tctcaaaatt aggtgtgaac attttcgttc ttcattagaa
     1501 gacagtgaag acgatattgt agaaatgagt gaattttcgt atcctgtctt ccgagctttc
     1561 ctggaatatc tatacacaga taacatcagc ctacctcctg aggaggcagt aggattgcta
     1621 gatctggcta cattttacag tgagactcgg ctgaaaaagc tctgtcaaca aactatcaag
     1681 caagggatct gtgaggagaa tgctattgct ctgctgtctg ctgctgtcaa gtacgatgct
     1741 caggacttag aagagttctg cttcaggttt tgcatcaacc atctgaccgt agtcacacaa
     1801 acgtcaggct ttgcagaaat ggaccacgat cttctgaaga actttatcag caaagccagc
     1861 agagttggag cctttaagaa ctgatcccaa acatggaaaa gaatgcttaa gccttccatt
     1921 tcacccccgc ccgcaaagat gaataaagaa taattacaaa aaaaaaaaaa a
//
