LOCUS       NM_001108380            3633 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus RCC1 and BTB domain containing protein 1
            (Rcbtb1), mRNA.
ACCESSION   NM_001108380 XM_001063868 XM_001063919 XM_341330
VERSION     NM_001108380.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3633)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JACYVU010000269.1.
            
            [WARNING] On Apr 1, 2024 this sequence was replaced by
            NM_001108380.3.
            
            On Nov 27, 2020 this sequence version replaced NM_001108380.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: AY724518.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132289, SAMD00132291 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-324               JACYVU010000269.1  3521316-3521639
            325-494             JACYVU010000269.1  3536829-3536998
            495-645             JACYVU010000269.1  3537347-3537497
            646-812             JACYVU010000269.1  3543442-3543608
            813-971             JACYVU010000269.1  3547378-3547536
            972-1079            JACYVU010000269.1  3549321-3549428
            1080-1222           JACYVU010000269.1  3550232-3550374
            1223-1413           JACYVU010000269.1  3551632-3551822
            1414-1540           JACYVU010000269.1  3553490-3553616
            1541-1692           JACYVU010000269.1  3555058-3555209
            1693-1823           JACYVU010000269.1  3556503-3556633
            1824-3633           JACYVU010000269.1  3561895-3563704
FEATURES             Location/Qualifiers
     source          1..3633
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /map="15p12"
     gene            1..3633
                     /gene="Rcbtb1"
                     /note="RCC1 and BTB domain containing protein 1"
                     /db_xref="GeneID:361050"
                     /db_xref="RGD:1308467"
     exon            1..324
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            325..494
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     CDS             369..1964
                     /gene="Rcbtb1"
                     /note="regulator of chromosome condensation (RCC1) and BTB
                     (POZ) domain containing protein 1"
                     /codon_start=1
                     /product="RCC1 and BTB domain-containing protein 1"
                     /protein_id="NP_001101850.1"
                     /db_xref="GeneID:361050"
                     /db_xref="RGD:1308467"
                     /translation="MVDVGKWPIFTLLSPQETGSIRKACVFGISASEAIYVTDSDEVF
                     VFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGPHVLLSTEDGVVYAWGHN
                     GYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQV
                     GSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNN
                     GNQLTPVRVAALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSP
                     TQIMVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFA
                     CFGTPAVSWRLLSVEHEDFLTVAESLKKEFDSPETADLKFRIDGKYIHVHKAVLKIRC
                     EHFRSMFQSYWNEDMKEVIEIDQFSYPVYRAFLQYLYTDTVDLPPEDAIGLLDLATSY
                     CENRLKRLCQHIIKRGITVENAFSLFSAAVRYDAEDLEEFCFKFCINHLTEVTQTAAF
                     WQMDGPLLKEFIAKASKCGAFKN"
     exon            495..645
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            646..812
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            813..971
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            972..1079
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1222
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1223..1413
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1414..1540
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1541..1692
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1693..1823
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1824..3633
                     /gene="Rcbtb1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagcccatta aggcggcggc gctgagggct cagggcctgg cccggaggcc tgacaggtag
       61 agcgctgcag ggcggaggtg cggcgagccg gggagccggg cggggccttg cttggccgct
      121 gcgaagtccg cgccctcccg agggccgtgc gcaccaggcg cgttcgcgac ccttcggcga
      181 cgcgcactct gcacccccgg cgttctgtcc tgcgggaact tcacccaggt gtgcggcggc
      241 gagctgagta aatggcgttg cccgcggcct gcctctgagg aaactcgctg ccggtcccac
      301 tggagaggaa caccaagcac gcagcggaga tgtcagctga tttataggag tcatccaaag
      361 ccacagtcat ggtagatgta ggaaagtggc caatcttcac tctgctctcg ccccaggaaa
      421 ctggatctat caggaaagca tgtgtctttg gaatctcggc cagcgaggcg atctatgtca
      481 ctgacagtga tgaggtcttc gtgtttggac tgaactatag taactgtcta ggaactggag
      541 ataaccagag caccctggtg cccaagaaac tagaagcttt gtgtggaaaa aggatcaaaa
      601 gccttagtta tgggagtggt ccccatgtcc tcctcagcac tgaagatgga gtcgtctatg
      661 cctggggcca taatggatac agccagctgg gaaacgggac caccaaccaa ggcattgccc
      721 ctattcaagt ctgcactaat ctcttggtca aacaagtggt tgaggtagct tgtggttcac
      781 atcattccat ggctttagca gctgatggag agttatttgc ttggggctat aacaactgtg
      841 gtcaggtggg atcaggatct acagcaaatc agccaactcc tcggaaagtt accaactgtt
      901 tacataccaa gaaagtggtc aacattgcct gtggtcagac ctcatccatg gctgttctgg
      961 acagtggtga ggtgtatggc tggggctaca atggcaatgg acagctgggc ctgggaaaca
     1021 acggcaacca gttgacccca gtgagggtgg cagccctgca cggcgtgtgt gtgaaccaga
     1081 tcgtctgcgg ttatgcacat acactagcac tcacagatga gggactgctc tatgcctggg
     1141 gagctaacac atatgggcag ctgggaactg gaagcaaaaa taacctgctg agccccacac
     1201 agatcatggt ggaaaaagaa agggttatag agattgcagc ttgtcactcc acccacacat
     1261 ctgctgccaa gacgcagggc gggcatgtgt acatgtgggg ccagtgccgg ggccagtctg
     1321 taatcctccc gcacctaacc cacttctcct gcaccgatga tgtatttgcc tgttttggca
     1381 ccccagctgt ctcatggcgc ctcctgtctg tagagcatga agacttttta acagttgcag
     1441 aatcactgaa gaaagaattt gatagtccag aaactgcaga tctgaagttt cgaattgatg
     1501 ggaaatatat tcacgtccat aaagctgttt tgaagatcag gtgcgagcac ttccggtcca
     1561 tgtttcagtc ctattggaat gaggacatga aggaagtgat agagatagac cagttctctt
     1621 accctgtgta ccgtgccttt ctccagtacc tctacacaga cacagtggac ctgccacctg
     1681 aggacgctat aggccttttg gacttggcaa catcgtactg tgagaacaga ctgaagaggc
     1741 tctgtcagca catcatcaag cgaggaatca ctgtggagaa tgctttctca ttgttctctg
     1801 ctgcagtcag atatgacgca gaggatttag aagaattctg ctttaagttt tgcatcaatc
     1861 atttgacaga agttacccag actgctgcgt tctggcaaat ggatggtccc ctgctaaagg
     1921 agttcattgc taaagccagt aaatgtggag cctttaagaa ttgaggccaa ggctgctggg
     1981 ctgggtgtgg gcgctctgag gcgctgggtg aggtgactct gcaggtaaag ccccgacaca
     2041 gtgtgctgta ggaatgcatg aaggacattg gttcttgtga gtctcttttt acatcgcttg
     2101 tttgtagata tgtacatttt acatgtgatt gttcttacgt ttgatgaaca ttgggaaagg
     2161 atggcagttt acatgctttt gttcttttaa ctttatgaaa gggtgttttg gacttgggcc
     2221 acaggccctt ccacaccgtc tgtggaggag gccctgtcgg gtgcttcctg agcgctgctc
     2281 acactcacca acctcctgtg ggggcatcag cactgggggg gtcatagtgg ggggtcataa
     2341 agaatattct atacacattc aaccacctag acagtcaagg aatggttagg tttctgagat
     2401 gctcttaatg cataggcatg tagggctgta gatggctcag caggtaaagg ctctgtcact
     2461 aagcatgagg acttaacctc atgcccagga cacacatggt ggagagagac agcggactta
     2521 cagttgtcct ctcactgttg gaggtgtacc atgtctacac acagacacca caaagaggaa
     2581 gaagaagaaa gaattagtac ctatagggaa gtaacgtgaa aagctggtgg taaagaagct
     2641 tttttcagga aggaagaagg tgacagaaat tagagtctcc cctgattgcc caacagtgct
     2701 tcactagggt gcaatggcaa acagggtgca cactatcgta ccctttataa ttactcacaa
     2761 acacactctg cgtggctgtt cttttctgac ttgatgtgat tgctaaagcc acccctcgta
     2821 caggacgcca tagaatgctc atagttttag gtggtgggag gagcctaggc caaattccat
     2881 caaaacctaa ttgaagcttc accttcacct ctctactttc ggcttttcct ttctttaatt
     2941 gtgttaggaa tacttttgtc atacactaag ctagggctcc atagcaattc ttttcctgaa
     3001 aggtcatttg tcaaagattg tatcagggtg gatggtgact gaggcaccaa agccaggcag
     3061 gtgtgatgac aggcaggatg aatacgaact acagcttaaa ggccttcttc ctgatcgtgc
     3121 ccctgcctcc tcagtgacac tttcctgacc aggatggagt ggacattacg tgatttgctg
     3181 tggtagatca tctgtagaac cacagttctg tgacttaggg cctcgaagca gtatctttag
     3241 gaaagtcacc ggtggtctca cttgaaaaac ttctccatgg gaaaagcaca aatcacagct
     3301 gcaaatccac atcgacaggt agtttacctg acagacatac ggacttcctg atcccgctga
     3361 acagctagag agtgagtgtg agagtgtgcg tgtgcgtgtg tgtgtgtgta tgtgtgtgtg
     3421 tgtgtgtgtg tgtgtgtgtg taagaaaagt cctttaaaag gggtttgcgt atttttttaa
     3481 tgcaatcttt ttatttttct acttggtttt ggttataatc atataaacaa aaaacttctt
     3541 gaaattaatg ttttcttctg atgtaataat ggaaggcaga gaagtcacat ttcttaaaag
     3601 agcccaactg tatccttgaa gttactggaa cca
//
