LOCUS       NM_001025663            2042 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus RNA binding motif protein, X-linked (Rbmx), mRNA.
ACCESSION   NM_001025663
VERSION     NM_001025663.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Yachie,N., Petsalaki,E., Mellor,J.C., Weile,J., Jacob,Y., Verby,M.,
            Ozturk,S.B., Li,S., Cote,A.G., Mosca,R., Knapp,J.J., Ko,M., Yu,A.,
            Gebbia,M., Sahni,N., Yi,S., Tyagi,T., Sheykhkarimli,D., Roth,J.F.,
            Wong,C., Musa,L., Snider,J., Liu,Y.C., Yu,H., Braun,P.,
            Stagljar,I., Hao,T., Calderwood,M.A., Pelletier,L., Aloy,P.,
            Hill,D.E., Vidal,M. and Roth,F.P.
  TITLE     Pooled-matrix protein interaction screens using Barcode Fusion
            Genetics
  JOURNAL   Mol Syst Biol 12 (4), 863 (2016)
   PUBMED   27107012
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Dai,M., Liu,Y., Nie,X., Zhang,J., Wang,Y., Ben,J., Zhang,S.,
            Yang,X. and Sang,A.
  TITLE     Expression of RBMX in the light-induced damage of rat retina in
            vivo
  JOURNAL   Cell Mol Neurobiol 35 (4), 463-471 (2015)
   PUBMED   25407628
  REMARK    GeneRIF: RBMX might play a significant role in the degenerative
            process of retinal ganglion cells after light-induced damage in the
            retina.
REFERENCE   3  (bases 1 to 2042)
  AUTHORS   Pieragostino,D., Agnifili,L., Fasanella,V., D'Aguanno,S.,
            Mastropasqua,R., Di Ilio,C., Sacchetta,P., Urbani,A. and Del
            Boccio,P.
  TITLE     Shotgun proteomics reveals specific modulated protein patterns in
            tears of patients with primary open angle glaucoma naive to therapy
  JOURNAL   Mol Biosyst 9 (6), 1108-1116 (2013)
   PUBMED   23580065
REFERENCE   4  (bases 1 to 2042)
  AUTHORS   Zhang,J., Li,D., Shen,A., Mao,H., Jin,H., Huang,W., Xu,D., Fan,J.,
            Chen,J., Yang,L. and Cui,Z.
  TITLE     Expression of RBMX after spinal cord injury in rats
  JOURNAL   J Mol Neurosci 49 (2), 417-429 (2013)
   PUBMED   23180094
  REMARK    GeneRIF: RBMX immunoreactivity was found in neurons and astrocytes,
            but not in microglia after spinal cord injury.
REFERENCE   5  (bases 1 to 2042)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   6  (bases 1 to 2042)
  AUTHORS   Nasim,M.T., Chernova,T.K., Chowdhury,H.M., Yue,B.G. and Eperon,I.C.
  TITLE     HnRNP G and Tra2beta: opposite effects on splicing matched by
            antagonism in RNA binding
  JOURNAL   Hum Mol Genet 12 (11), 1337-1348 (2003)
   PUBMED   12761049
  REMARK    Erratum:[Hum Mol Genet. 2003 Aug 1;12(15):1941]
REFERENCE   7  (bases 1 to 2042)
  AUTHORS   Hofmann,Y. and Wirth,B.
  TITLE     hnRNP-G promotes exon 7 inclusion of survival motor neuron (SMN)
            via direct interaction with Htra2-beta1
  JOURNAL   Hum Mol Genet 11 (17), 2037-2049 (2002)
   PUBMED   12165565
REFERENCE   8  (bases 1 to 2042)
  AUTHORS   Jurica,M.S., Licklider,L.J., Gygi,S.R., Grigorieff,N. and
            Moore,M.J.
  TITLE     Purification and characterization of native spliceosomes suitable
            for three-dimensional structural analysis
  JOURNAL   RNA 8 (4), 426-439 (2002)
   PUBMED   11991638
REFERENCE   9  (bases 1 to 2042)
  AUTHORS   Stoss,O., Olbrich,M., Hartmann,A.M., Konig,H., Memmott,J.,
            Andreadis,A. and Stamm,S.
  TITLE     The STAR/GSG family protein rSLM-2 regulates the selection of
            alternative splice sites
  JOURNAL   J Biol Chem 276 (12), 8665-8673 (2001)
   PUBMED   11118435
REFERENCE   10 (bases 1 to 2042)
  AUTHORS   Venables,J.P., Elliott,D.J., Makarova,O.V., Makarov,E.M.,
            Cooke,H.J. and Eperon,I.C.
  TITLE     RBMY, a probable human spermatogenesis factor, and other hnRNP G
            proteins interact with Tra2beta and affect splicing
  JOURNAL   Hum Mol Genet 9 (5), 685-694 (2000)
   PUBMED   10749975
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC097479.1.
            
            [WARNING] On Oct 18, 2024 this sequence was replaced by
            NM_001025663.2.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC097479.1, SRR8487227.100978.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq36"
     gene            1..2042
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /note="RNA binding motif protein, X-linked"
                     /db_xref="GeneID:302855"
                     /db_xref="RGD:1565256"
     exon            1..112
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            113..228
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     CDS             120..1292
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /note="heterogeneous nuclear ribonucleoprotein G; RNA
                     binding motif protein, X chromosome; RNA-binding motif
                     protein, X chromosome retrogene"
                     /codon_start=1
                     /product="RNA-binding motif protein, X chromosome"
                     /protein_id="NP_001020834.1"
                     /db_xref="GeneID:302855"
                     /db_xref="RGD:1565256"
                     /translation="MVEADRPGKLFIGGLNTETNEKALEAVFGKYGRIVEVLLMKDRE
                     TNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQATKPSFESGRRGLPPPPRS
                     RGPPRGLRGGRGGSGGTRGPPSRGGHMDDGGYSMNFTLSSSRGPLPVKRGPPPRSGGP
                     PPKRSAPSGPVRSSSGMGGRAPVSRGRDGYGGPPRREPLPSRRDVYLSPRDDGYSTKD
                     SYSSRDYPSSRDTRDYAPPPRDYTYRDYGHSSSRDDYPSRGYSDRDGYGRERDYSDHP
                     SGGSYRDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYTSSRSDL
                     YSSGRDRVGRQERGLPPSMERGYPPPRDSYSSSSRGAPRGGGRGGSRSDRGGRSRY"
     exon            229..335
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            336..507
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            508..660
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            661..775
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            776..901
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            902..984
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
     exon            985..2003
                     /gene="Rbmx"
                     /gene_synonym="hnRNP G; hnRNP-G"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagcgtcatt tctgtatcgt actgaaaatc ggtagctgtc actggtgcgg cgctgctcag
       61 aaggccccat cggcgagctc aaaggagctt gagactgtcg ccatcccctc cgaggaaaga
      121 tggttgaagc agatcgccca ggaaagctct ttattggtgg gcttaataca gaaacaaatg
      181 agaaagccct ggaggcagtg tttggcaaat atggacgaat agtggaagtg cttttgatga
      241 aggaccgaga aaccaataag tcaagaggat ttgcttttgt cacatttgaa agcccagcag
      301 atgcaaagga tgctgccaga gacatgaatg gaaagtcctt agatggaaaa gccatcaagg
      361 tggagcaagc caccaaacca tcatttgaaa gtggcagacg tggactacct ccacctccaa
      421 gaagcagagg ccctcccaga ggtcttcgag gaggaagagg gggaagtgga ggaaccagag
      481 gacccccatc acggggagga cacatggatg atggtggcta ctccatgaat tttactttga
      541 gttcttccag aggacctctt ccagtaaaaa gaggaccacc accaagaagt ggaggtcctc
      601 ctcctaaaag atcagcacct tcaggaccag ttcgcagcag cagtggaatg ggaggaagag
      661 ctcctgtgtc acgtggaaga gatggttatg gaggcccacc acgaagagag cccctgcctt
      721 ctcgtagaga tgtttatttg tccccgagag atgatggata ttccactaaa gacagctatt
      781 caagcagaga ctatccaagt tctcgagata cacgagatta tgcaccacca ccaagagatt
      841 atacttaccg tgattatggt cattccagtt cacgagatga ctatccatca agaggctata
      901 gtgatagaga tggatatggt cgggagcgtg actattcgga tcatccaagt ggaggttcct
      961 acagagattc gtatgagagt tatggtaact cacgtagtgc tccacctaca cgagggcccc
     1021 cgccatctta tggtggaagc agtcgctatg atgattacag cagctcacgt gacggatatg
     1081 gtggaagtcg agacagttac acaagcagcc gaagtgatct ctactcaagt ggtcgtgatc
     1141 gcgtgggcag acaagaacga gggcttcccc cttctatgga aagggggtac cctcctccac
     1201 gtgattccta cagcagttca agccgcggag caccaagagg tggtggccgt ggaggaagcc
     1261 gatctgatag agggggcaga agcagatact aggaacaaac aaaacttttg gaccaacaat
     1321 ccccattcaa agaaacaaac aaaaaaatgg aaactttctg tcataaacta cccaaggact
     1381 actaaaggaa aaattgtgtt acctttttaa aatttcctgt tccccttaat aatttttatg
     1441 ttcttgtgag ggaaaaagta agacatgttt aattttattt gctattatga gttgctttca
     1501 acaagcaaat gttagatgtg taagccgtga cttgttacta gtgttgtaat tttccaagta
     1561 aaagtgtccc tgaaggccac ttcctgattt ttcccagcaa atgaggcaag caaccccaag
     1621 atcttccaca aacatttagc catctagatg tcctttggtc tccattgaga gttgaatcac
     1681 cctgcctgtg cagacaagct agccattaga gagggttggt ggggtgtgag gatttcaggg
     1741 tgtcttccaa ctgaaatctc aatgttcgca gtatatatat attcaaacaa acaaaccaag
     1801 ctgagatcag atgcctaggc atgtactatt tacccagaaa cccccccccc tcaaaaaaag
     1861 caaatggatg ctggccatat tttgcttttc tgacctttcc ttgggaatct acaagaacct
     1921 cccttccccc tccccgagta agaccattta agtgtgtgtt aaacaactac aaaatactaa
     1981 ataaaaagtt tggccaaaat caaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     2041 aa
//
