LOCUS       NM_001012184            1979 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus RNA binding motif, single stranded interacting
            protein 1 (Rbms1), mRNA.
ACCESSION   NM_001012184 XM_342438
VERSION     NM_001012184.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1979)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1979)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087094.1.
            
            On Feb 11, 2005 this sequence version replaced XM_342438.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087094.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1979
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q21"
     gene            1..1979
                     /gene="Rbms1"
                     /note="RNA binding motif, single stranded interacting
                     protein 1"
                     /db_xref="GeneID:362138"
                     /db_xref="RGD:1307777"
     exon            1..514
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     CDS             440..1651
                     /gene="Rbms1"
                     /codon_start=1
                     /product="RNA-binding motif, single-stranded-interacting
                     protein 1"
                     /protein_id="NP_001012184.1"
                     /db_xref="GeneID:362138"
                     /db_xref="RGD:1307777"
                     /translation="MGKVWKQQMYPQYATYYYPQYLQAKQSLVPAHPMAPPSPSTTSS
                     NNNSSSSSNSGWDQLSKTNLYIRGLPPNTTDQDLVKLCQPYGKIVSTKAILDKATNKC
                     KGYGFVDFDSPAAAQKAVSALKASGVQAQMAKQQEQDPTNLYISNLPLSMDEQELENM
                     LKPFGQVISTRVLRDSSGTSRGVGFARMESTEKCEAVIGHFNGKFIKTPPGVSAPTEP
                     LLCKFADGGQKKRQNPNKYIPNGRPWPREGEAGMTLTYDPTTAALHNGFYPSPYSIAT
                     NRMITQTSLTPYIASPVSAYQVQSPSWMQPQPYILQHPGAVLTPSMEHTMSLQPASMI
                     SPLAQQMSHLSLGSTGTYMPATSAMQGAYLPQYTHMQTATVPVEEASGQQQVTVETSN
                     DHSPYTFPPNK"
     exon            515..690
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            691..749
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            750..841
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            842..999
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1000..1079
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1080..1186
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1187..1236
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1237..1330
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1331..1381
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1382..1492
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1493..1573
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1574..1658
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
     exon            1659..1969
                     /gene="Rbms1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gatgccgcct ggcaccaagc gcagccgccg ccgccgccgt actttccact tgtattgatc
       61 actcgtagct gggctcagcc tgctcccgga gcgcagcgcg gccagagcgc cagcccttgg
      121 cagctcgggc acagtcgggc tcccagagga aactccttgg gagcgccctg tccggggtgt
      181 cctctgcgct ctgcagtgtc tttctgtctg cctggaagga ggaggaggag aaggaggagg
      241 aggaagagca gaaggaggag gaggaggtgg aggaggagga cgtcgtctgg tcccggttgg
      301 gaggtggagc agtggcagca gcagccgccg aggcagccgc cgccgccgcc tccggaaagg
      361 gagaggcagg agaaagagat cgggacttgg aaaacctaaa gtgtcttcga ccctgcacgg
      421 caggcttcct tccagcttca tgggcaaagt gtggaaacaa cagatgtacc ctcagtacgc
      481 cacctattac tacccccagt atctgcaagc caagcagtct ctggtcccag cgcaccccat
      541 ggcccctccc agtcccagca ccaccagcag taataacaac agtagcagca gtagcaactc
      601 aggatgggat cagctgagta agacgaacct ctacatccga ggcctgcccc ccaacaccac
      661 tgatcaagac ctggtgaagc tctgtcaacc atacgggaag attgtctcca cgaaggcgat
      721 tttggataag gcaaccaaca agtgcaaagg ttatggattt gttgactttg acagtcctgc
      781 agcagcccag aaagctgtct ccgccctgaa ggcgagtgga gtccaggctc agatggcaaa
      841 gcaacaggaa caagatccta ccaacctgta catttctaac ctgccactgt ccatggatga
      901 acaagaactt gaaaatatgc tcaaaccctt tggacaagtt atttctacaa gggtcctgcg
      961 tgattccagt ggtaccagcc gtggtgttgg ctttgccagg atggaatcaa cggaaaaatg
     1021 cgaagctgta attggtcatt ttaatggaaa attcatcaag accccaccag gagtttctgc
     1081 tcctacagaa cctttactgt gcaagtttgc ggatggagga cagaagaaga gacagaaccc
     1141 aaacaagtac atccctaatg ggcggccatg gcccagagaa ggagaggccg gaatgacact
     1201 cacttacgac ccgactacag ctgctctaca caacggattt tatccttcac catacagtat
     1261 tgccacaaac cgaatgatca ctcaaacttc tcttacaccc tatattgcat ctcctgtatc
     1321 tgcctaccag gtgcagagtc cttcctggat gcagcctcaa ccatacattc tgcagcatcc
     1381 tggtgccgtg ttaactccct ccatggaaca caccatgtca ctacaacctg cttctatgat
     1441 cagccctctg gcccagcaga tgagtcacct gtcactaggc agcaccggaa catacatgcc
     1501 tgcaacgtca gccatgcaag gagcctactt accacagtac acacacatgc agactgcgac
     1561 ggttcccgtt gaggaagcaa gtggccagca gcaggtgact gtggagacgt ctaatgacca
     1621 ttctccatat acctttccac ccaataagta actgtgagat gtaccgaagg gagttcttac
     1681 atgaagaagg gtgtgaaggc tgaacaatca tggatttttc tgatcaattg tgctttagga
     1741 aattattgac agttttgcac aggttcttga aaacgttatt tataatgaaa tcaactaaaa
     1801 ctatttttgc tataagttct ataaggtgca taaaaccctt aaattcatct agtagctgtt
     1861 cccctgaaca ggtttatttt agtaaaaaac aaaaacaaaa cggaaaaaaa aaaggaaaaa
     1921 aaaagtcaaa agatttttat caaatataat gatgcaaaaa aaaaaaaaaa aaaaaaaaa
//
