LOCUS       NM_001007014            1830 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RNA binding motif protein 4B (Rbm4b), mRNA.
ACCESSION   NM_001007014 XM_215168
VERSION     NM_001007014.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 1830)
  AUTHORS   Kojima,S., Matsumoto,K., Hirose,M., Shimada,M., Nagano,M.,
            Shigeyoshi,Y., Hoshino,S., Ui-Tei,K., Saigo,K., Green,C.B.,
            Sakaki,Y. and Tei,H.
  TITLE     LARK activates posttranscriptional expression of an essential
            mammalian clock protein, PERIOD1
  JOURNAL   Proc Natl Acad Sci U S A 104 (6), 1859-1864 (2007)
   PUBMED   17264215
REFERENCE   4  (bases 1 to 1830)
  AUTHORS   Guo,D., Ling,J., Wang,M.H., She,J.X., Gu,J. and Wang,C.Y.
  TITLE     Physical interaction and functional coupling between ACDP4 and the
            intracellular ion chaperone COX11, an implication of the role of
            ACDP4 in essential metal ion transport and homeostasis
  JOURNAL   Mol Pain 1, 15 (2005)
   PUBMED   15840172
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1830)
  AUTHORS   Ishii,H., Vecchione,A., Furukawa,Y., Croce,C.M., Huebner,K. and
            Fong,L.Y.
  TITLE     Differentially expressed genes execute zinc-induced apoptosis in
            precancerous esophageal epithelium of zinc-deficient rats
  JOURNAL   Oncogene 23 (49), 8040-8048 (2004)
   PUBMED   15361827
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC086416.1.
            
            On or before Jan 12, 2005 this sequence version replaced
            XM_215168.2, NM_001007014.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC086416.1, AY303541.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q43"
     gene            1..1830
                     /gene="Rbm4b"
                     /note="RNA binding motif protein 4B"
                     /db_xref="GeneID:474154"
                     /db_xref="RGD:1359343"
     exon            1..104
                     /gene="Rbm4b"
                     /inference="alignment:Splign:2.1.0"
     exon            105..528
                     /gene="Rbm4b"
                     /inference="alignment:Splign:2.1.0"
     CDS             117..1190
                     /gene="Rbm4b"
                     /note="RNA-binding protein 30; zinc-responsive protein
                     ZD7; RNA-binding motif protein 30"
                     /codon_start=1
                     /product="RNA-binding protein 4B"
                     /protein_id="NP_001007015.2"
                     /db_xref="GeneID:474154"
                     /db_xref="RGD:1359343"
                     /translation="MVKLFIGNLPREATEQEIRSLFEQYGKVLECDIIKNYGFVHIED
                     KTAAEDAIRNLHHYKLHGVNINVEASKNKSKASTKLHVGNISPTCTNQELRAKFEEYG
                     PVIECDIVKDYAFVHMERAEDAVEAIRGLDNTEFQGKRMHVQLSTSRLRTAPGMGDQS
                     GCYRCGKEGHWSKECPVDRTGRVADFTEQYNEQYGAVRTPYTMGYGESMYYNDAYGAL
                     DYYKRYRVRSYEAVAAAAAASAYNYAEQTMSHLPQVQSSAVPSHLNSTSVDPYDRHLL
                     QNSGSAATSAAMAAAASSSYYGRDRSPLRRNAAVLPTVGEGYGYGPESEMSQASAATR
                     NSLYDMARYEREQYVDRARYSAF"
     exon            529..1199
                     /gene="Rbm4b"
                     /inference="alignment:Splign:2.1.0"
     exon            1200..1801
                     /gene="Rbm4b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgcgcgagaa agcgcccggt cgcgccgagg ctcgagcggc cgtcgccatt ttgtagggtt
       61 ctctctgacg cgggacccgc cgccaccacc ggcaccaccc ggaggctctt gtcagaatgg
      121 tgaagctgtt catcggaaat ctgccccggg aggccacaga gcaggagatc cgctcactct
      181 tcgagcagta cgggaaggtg ctggaatgtg acatcattaa gaactatggc tttgtgcaca
      241 tagaggacaa gacggccgct gaggatgcca tacgcaacct gcaccactac aaactgcacg
      301 gagtgaacat caatgtggaa gccagcaaga ataagagcaa agcttcaacc aaattacatg
      361 tgggcaacat cagtcccact tgtaccaacc aagagcttcg ggccaagttt gaggagtacg
      421 gcccagtcat cgaatgtgac atcgtgaaag attatgcctt tgtacacatg gagcgggcag
      481 aagatgcggt ggaggccatc aggggccttg acaacacaga gtttcaaggc aaacgaatgc
      541 atgtacagtt gtcaactagc cggcttcgga ctgcccctgg gatgggagac cagagtggtt
      601 gctatcggtg tggtaaagaa ggacactggt ccaaagagtg cccagtagac cgtacagggc
      661 gtgtggcaga ctttactgaa cagtacaatg aacaatatgg agcagtgcgc acgccttata
      721 ctatgggtta tggggagtcc atgtattaca acgatgccta tggagcactc gactactata
      781 agcgctaccg cgtcagatct tatgaagctg tggcagcggc agctgcagct tccgcataca
      841 attatgcaga gcagaccatg tctcatcttc ctcaagtcca gagctcagct gtacccagtc
      901 atctcaactc cacttctgtt gatccttatg acagacatct attgcagaac tctggctctg
      961 ctgccacctc agctgcaatg gctgctgctg cttcctcttc ctattatgga agggacagga
     1021 gcccactacg tcggaatgca gctgtgctcc ccacagttgg agagggctac ggttatgggc
     1081 cagagagtga gatgtctcag gcttcagcag caacacggaa ttctctgtat gacatggccc
     1141 ggtatgagcg ggagcagtat gtggaccgag cacggtactc agccttttaa aaactggagg
     1201 taggataatt gcggactgaa ccctcgggct gcggtcatat atgagaactt ggtcctcgcg
     1261 gtcccctttg ccaggatgtt cccattgctt catgtttcag taaacaaagg aatttgtgac
     1321 caactatgtt ttctttctta atttaattct tctaagttga ctttcctttc ctcgatgcta
     1381 gttgtctgta gcttttcact ctgttcctta tattctcagc ctctgaacag ccctaggtaa
     1441 ggattatgct ggcatccccc cttttcctgt acagtggaag cccctcttaa tcttactttc
     1501 cttaggagtt gagcccttct ccctgccttc ctgcagcatc ttctttccct ttaaaatgac
     1561 catgtagtgg caagcagcct ttaactcttc tgttagttct ggactcttta acattgaagc
     1621 tagtcttctg aagttgctag gaccattggg attttgttct tgttttggtt tgattttgtt
     1681 ttgttttcgg ttttgtctga cctgtgatcg tggtacagca tttgctgaaa tttagccttg
     1741 ttttattcca ctcccccata ttttttttga aaaaaaaaaa ataaatgttt ctaacactta
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//
