LOCUS       NM_001024246            1910 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus RNA binding motif protein 48 (Rbm48), mRNA.
ACCESSION   NM_001024246 XM_216084
VERSION     NM_001024246.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1910)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC093393.1.
            
            On May 27, 2005 this sequence version replaced XM_216084.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC093393.1, SRR8487230.48227.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132264, SAMD00132265
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1910
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q13"
     gene            1..1910
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /note="RNA binding motif protein 48"
                     /db_xref="GeneID:296840"
                     /db_xref="RGD:1310794"
     exon            1..144
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /inference="alignment:Splign:2.1.0"
     CDS             34..1149
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /note="UPF0712 protein C7orf64 homolog"
                     /codon_start=1
                     /product="RNA-binding protein 48"
                     /protein_id="NP_001019417.1"
                     /db_xref="GeneID:296840"
                     /db_xref="RGD:1310794"
                     /translation="MASSDGKPGGIFDHHVQTAVCDSRAKYREGRRPRAVKVYTINLE
                     SQYLLIQGVPAVGAMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKFVKLQSARI
                     AKKKMDEQSFFGGLLHVCYAPEFETVEETRKKLEERKAYISRVTKNQDYYVTKKKPVP
                     EQKGTKDSRQDFHAHMPGFCTPALNTSPKNPSENSSPCLPYSCEFPLCYFASKSPCSP
                     GEHTDKASDSCNSARNRGELQKHRDHSAFPPKLQMNTYKTSVPCSSVQEAIATSQAVG
                     RFMPRTTQLQERKRRRDCDRELGTFLETNISSNEVLIGPKLPGIPTVDLQDDSLNTTA
                     NLIRSKLKEVTSSVPKPPEDNGEDVCTSHPRKQRRRI"
     exon            145..335
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /inference="alignment:Splign:2.1.0"
     exon            336..481
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /inference="alignment:Splign:2.1.0"
     exon            482..1062
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /inference="alignment:Splign:2.1.0"
     exon            1063..1885
                     /gene="Rbm48"
                     /gene_synonym="RGD1310794"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gttgttctgg cgcgggggct tgaagccggc aagatggcct ccagtgacgg gaaacccggt
       61 ggcatattcg accaccacgt ccagacagct gtgtgtgact cgcgggccaa atacagggag
      121 ggccgacgcc ctcgcgcggt caaggtatat accatcaatt tggagtctca gtacttacta
      181 atacaaggag ttcctgcagt gggagccatg aaggaattag ttgagagatt tgctctctat
      241 ggtgcgattg aacagtataa tgctctagat gaatacccag cagaagattt tacagaagtt
      301 tatctcatta aatttgtgaa attacaaagt gcaaggatag ctaagaaaaa gatggatgaa
      361 cagagtttct ttggagggtt acttcatgtg tgctatgctc cagaatttga gacagttgaa
      421 gaaactagaa aaaaattaga agaaagaaag gcttatattt caagagttac taaaaaccaa
      481 gactattatg tgaccaagaa gaaaccagtt ccagagcaaa aaggaacaaa agattctaga
      541 caagacttcc atgcacatat gcctggattt tgtacacctg ctttaaacac atctcccaag
      601 aatccttcag agaactcaag tccttgtctt ccttactctt gtgaattccc tttatgctat
      661 tttgcctcca aaagcccatg ttcacctggg gagcacacgg acaaagcgtc agactcctgc
      721 aatagtgcta ggaaccgtgg tgaactgcag aagcaccgtg accacagtgc ctttccccca
      781 aaactacaga tgaacactta caaaacttcc gtcccttgct ctagtgtgca agaggccatt
      841 gctacttcac aggcagttgg cagatttatg cctaggacaa cacagctgca ggagaggaaa
      901 agacggcgag actgtgatcg tgaacttgga acttttcttg aaacaaacat aagcagtaac
      961 gaggttttga ttggacctaa gttaccaggt attcccacag tagatctgca ggatgactcc
     1021 ttgaatacaa cggcaaactt aattcggagt aaacttaaag aggtgacttc atctgtgccg
     1081 aagcctccgg aggacaatgg tgaagatgtg tgtacaagtc acccacgaaa acaaagaaga
     1141 agaatctagc tggccagtgg ggagttagtc ttgccttttc tttctttttt cttttgaatc
     1201 agggtctccc tggagagccc tggctggtct ggaactcgct atgcagacca ggccggcctt
     1261 gggcctctgc ccctgagtgc tgggattaaa gggtgtgtgc caccacaccc aactaaactg
     1321 gtattttctg gagagattct cttttatgtc cgacccattc taattctttc aggcatctta
     1381 ctactgctgt tgtgaagtgt ttcctcttaa actgtctgca gatattccgt ctctctcagt
     1441 tctgcactca gggtggcaga gactgttctc ttcactccac agtagttatg acaatatgca
     1501 aattgactga aacggacatg caaatgtgat gcaaataaag gagatcaggg tctcacttta
     1561 attcaagtgt tgagcgggtt gtgctcaaaa ctagcagggg agttgttttt gaataccaga
     1621 gcttcgaaat gaaagcaggt ctgtaaagag aaagtgccaa taaaacgtta aaacaaagtt
     1681 gataatagaa acatatataa tgtaatttct aagaccaatt tatatcaact atggtgatgt
     1741 ttaaaactaa tgaagtttgg aaattctaga tttctacact atcagcatat ctgtgttttt
     1801 tcttctgtca gcagaccact gtgtaatttt gttaggctgt ttccattttc ttttctagga
     1861 aaaaataaac tgagaagaca cgtgcaaaaa aaaaaaaaaa aaaaaaaaaa
//
