LOCUS       NM_153306               1778 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RNA binding motif protein 45 (Rbm45), mRNA.
ACCESSION   NM_153306
VERSION     NM_153306.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1778)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 1778)
  AUTHORS   Tamada,H., Sakashita,E., Shimazaki,K., Ueno,E., Hamamoto,T.,
            Kagawa,Y. and Endo,H.
  TITLE     cDNA cloning and characterization of Drb1, a new member of RRM-type
            neural RNA-binding protein
  JOURNAL   Biochem Biophys Res Commun 297 (1), 96-104 (2002)
   PUBMED   12220514
  REMARK    GeneRIF: a new member of RRM-type neural RNA-binding protein
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AB036990.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB036990.1, SRR8487231.120643.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132263
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1778
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q24"
     gene            1..1778
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /note="RNA binding motif protein 45"
                     /db_xref="GeneID:266631"
                     /db_xref="RGD:628862"
     exon            1..350
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..1481
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /note="developmentally-regulated RNA-binding protein 1"
                     /codon_start=1
                     /product="RNA-binding protein 45"
                     /protein_id="NP_695218.1"
                     /db_xref="GeneID:266631"
                     /db_xref="RGD:628862"
                     /translation="MDDAGSSGGSGGFRPGVDSLDEPPNSRIFLVISKYTSESVLREH
                     FSPFGDIQDIWVVRDKHTKESKGIAFVKFARSSQACRAMEEMHGQCLGPNDTKPIKVF
                     IAQSRSSGSHRDVEDEELTRIFVMIPKSYTEEDLREKFKVYGDIEYCSVIKNKVTGES
                     KGLGYVRYLKPSQAAQAIENCDRSFRALLAEPKNKVLESPEQDYYSSVRQETLGHEPR
                     GNLFPFVGEQQSEFSTFDKNDSRGQEAISKRLSVASRVPFTEEQLFSIFDIVPGLEYC
                     EVHRDPYLNYGHGVVQYFNVASAVYAQYKLHGFQYPPGNRIAVSFLDDGSNSADLIRK
                     MATQMVAAQLASTVWSNPSHQQFLQFGGSAGSQVPQIQTDVVLPSCRKKAPPETPVKE
                     RLFIVFNPHPLPLDVLEDIFCRFGNLIEVYLVSGKNVGYVKYADRMSANDAITTLHGK
                     ILNGVRLKVMLADSPREVSKKRQRTY"
     exon            351..473
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            474..600
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            601..723
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            724..909
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            910..1039
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1040..1124
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1125..1288
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1289..1489
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
     exon            1490..1778
                     /gene="Rbm45"
                     /gene_synonym="Drb1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggtggacag agcctgcggg gggctgcgcc tggctcccgc gcggggcacc atggacgacg
       61 ccggcagctc cggaggcagc ggaggcttcc gccccggagt agacagtctg gatgagccgc
      121 ccaacagccg catcttccta gtgatcagca agtacacatc ggaatcggtg ctgagggagc
      181 acttctcgcc cttcggagac atccaggaca tctgggtagt gcgcgacaag cacactaagg
      241 agtccaaggg catcgccttc gtcaagttcg cacgcagctc acaggcctgc cgggctatgg
      301 aggagatgca cggacagtgc cttggtccca acgacaccaa gcccatcaag gttttcattg
      361 cccagtcccg atcatcaggg agtcacaggg atgtcgaaga cgaagagctc acgaggatct
      421 ttgtcatgat accaaagtcc tacacggagg aagacctgcg ggagaagttc aaggtgtatg
      481 gagacatcga gtactgcagc gttattaaga ataaagtcac tggagaaagt aaaggcttgg
      541 gctacgtgcg gtacttaaaa ccatcacaag ctgcccaggc aatagaaaac tgtgatagaa
      601 gtttcagagc actcttggct gaacctaaaa ataaagtgtt ggagtcccca gaacaagatt
      661 attacagtag cgtgaggcag gagactttgg ggcacgagcc tagaggaaat ctgtttccct
      721 tcgttggaga acaacaatct gaattttcaa cttttgacaa gaacgatagc agaggccagg
      781 aagctatctc caaacgcctg tcggtggcgt cgagggtccc cttcacagag gagcagctct
      841 tcagcatttt tgacatcgtc ccagggctgg agtactgtga ggttcaccga gacccttact
      901 taaattatgg tcatggcgtg gttcagtatt ttaacgtggc atcggctgtt tatgcacaat
      961 acaaactgca tggattccag taccctcccg ggaatcggat agctgtttcc tttctggatg
     1021 acggaagtaa ttcagctgat ctcatcagga aaatggccac acagatggtg gcggcacagc
     1081 tcgcgtcaac ggtgtggagt aacccgagtc accagcagtt tctgcaattc ggaggaagtg
     1141 ctgggtcaca agtgcctcaa atccagacag acgtagtact tccgtcatgc agaaagaaag
     1201 ccccaccgga aactcctgtg aaagaaaggc tgtttattgt gtttaatccc catcctttgc
     1261 cgttagacgt gttggaggat atattctgcc gttttgggaa cctgattgag gtctaccttg
     1321 tgtcggggaa aaatgtgggc tatgtcaagt atgctgatag aatgagcgcc aatgacgcca
     1381 tcacaactct gcacgggaag attctaaatg gggtcagact taaggttatg ctggcagatt
     1441 ccccaagaga agtatccaaa aagaggcaga gaacttactg agttttaagg acaaagacta
     1501 actaatgaca taatcctcag ctgactgact gaaaacctga ctggacgaac ccctgtggac
     1561 agttgacagc tttttttttc ttttcctcac atatttgata gtttacacac cattgcctat
     1621 ctgggatcgc tgacatgtat ttttatctga ccttaatggt aaaattaata tagtagttgt
     1681 ttcctagaac aaaatgttgc tgtgtatagc agaaataaag cttccttaga gaaatatgtt
     1741 gtcatgtata gcagaaataa agtttgcttt gtataact
//
