LOCUS       NM_001037649            1912 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus RNA binding motif protein 43 (Rbm43), mRNA.
ACCESSION   NM_001037649 XM_229915
VERSION     NM_001037649.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC107648.1.
            
            On Dec 9, 2005 this sequence version replaced XM_229915.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC107648.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q12"
     gene            1..1912
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /note="RNA binding motif protein 43"
                     /db_xref="GeneID:311020"
                     /db_xref="RGD:1306676"
     exon            1..37
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
     exon            38..156
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
     CDS             154..1185
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /note="rCG37778-like"
                     /codon_start=1
                     /product="RNA-binding protein 43"
                     /protein_id="NP_001032738.1"
                     /db_xref="GeneID:311020"
                     /db_xref="RGD:1306676"
                     /translation="MASALTVKDPTVSERTVVVSGLPVGLSKDQLVKRYFRDEGGHVE
                     KVIYPPRSKGVAYIIFKEKKVAQTIIRQKKHSLGSEPLLTVSHFSEKVFNYVMAILDL
                     SVFRPQIVLESLVVDLKKKIPTLNFSPLGRSGKISVQGSFLAILKLKQALISKAISAL
                     ENNRKYAGERRNWTGQNPRRVLQKNENSAPTLGTSVPEPAGSPETLVLDTDVFLYLKH
                     KCQFYEPTLSKYHVLCQERVDGDITTLCLQDARDGSYPGSVRHVKELIEEWAQEFYLE
                     LRKELLVLEGRRESEKRNMRQAFEQLCCRYPRVLMNVHRTHIDLIGPPSDTSLFKTQL
                     MKSAGQKVT"
     exon            157..346
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
     exon            347..426
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
     exon            427..1274
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
     exon            1275..1898
                     /gene="Rbm43"
                     /gene_synonym="RGD1306676"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggccttcccg ctgcctgagc atctcctccc tgcccaggta ggacctgcgt gccatctcat
       61 cttgactcag ctactggttg aaaggacagc gattcctaga ccctgcatct tctgggccat
      121 caccaccacc gccttagttt tctgaattcc acgatggcat cagcgttgac ggtcaaagat
      181 cccacagttt ctgagagaac agttgtagtt tctgggcttc cagtcggcct ctcaaaagac
      241 cagttagtga agcgctactt ccgggatgag ggcggacatg tggaaaaggt gatatatcca
      301 ccaagatcca aaggagttgc gtatatcatc ttcaaggaaa agaaagttgc acagaccatc
      361 atcagacaaa agaaacactc tctaggctca gagcctctgc tcacagtctc tcacttcagt
      421 gaaaaggtct tcaactatgt gatggccatt cttgatttgt ctgtttttcg gcctcagatt
      481 gtgctagaaa gcctagtagt agacctgaaa aagaaaatcc caactttaaa ttttagccca
      541 ttgggacgca gtgggaaaat ctctgtgcaa ggttcatttc tggccatcct gaagctcaaa
      601 caggctttga tatcaaaagc tatttccgct ttagaaaaca acaggaaata cgctggtgag
      661 aggagaaact ggactggaca gaaccctaga cgggtcctgc agaaaaacga gaactctgca
      721 ccaactctgg ggacctctgt acctgagcct gccggcagcc cggagacact tgtgcttgat
      781 acagatgttt ttctttactt gaaacacaag tgtcagtttt atgaaccaac gctgagcaaa
      841 taccacgtcc tgtgtcagga aagggtggat ggtgacatca ctaccctttg tctacaagat
      901 gcccgggatg ggtcttaccc tggcagcgtc agacatgtga aggagctcat tgaggagtgg
      961 gcccaggagt tctaccttga gctcagaaaa gagctgctgg ttttggaagg aaggagagag
     1021 agcgagaaaa gaaacatgag gcaggctttt gaacaactgt gttgcagata tcctagagtt
     1081 ttgatgaatg ttcacagaac acatattgac cttataggac ctccttctga cacgtccctg
     1141 tttaagacac agctcatgaa gtctgcaggg caaaaggtca cttgaagtct cggccacagt
     1201 tatcatggtc actccccccc gcccctcccc cacccagggt gtaggtgaag atttggatat
     1261 gaagatatgg atatgaaact acttatccaa agttatccag tagacagtga atgggactgg
     1321 cattgaataa aaagtaatgt ctaaatcaag ccttgaaaaa aagaactcac taaatgttga
     1381 ctgatttccc ctgcaaatca aaattattag gagaagaagt cttcccctgc ataggttggc
     1441 atgactagtg tgctgttgct aagctctcgg ggtttgtatt caccccacat agcattagaa
     1501 tgttggccga gctcacttgg gaagttgtgg ttctgtcaga attgtggggg aatcttggga
     1561 gaagtctgtg tgaatgcttt tgtgtgtgct tcttgctttc cgatagtatg gcatccagat
     1621 gagcattgtg agtcgaaaac attgtgaatc agaaatgcct ttaattcaag tagtttgcag
     1681 aacatgctag atttgccaaa ctgcccacag tgaggagatg actgcgtacc cgggttgctg
     1741 cgttgactga cagataggct cagtgatgct gctctgcact gcttgacagc atcgggtagt
     1801 ggatcagcac ttgtttggaa gagattcagt gttcgaagta cgatttctac tgactcttta
     1861 ttccttttgc accgtaataa aggaaaacgt acagaagaaa aaaaaaaaaa aa
//
