LOCUS       NM_001014015            2900 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RNA binding motif protein 34 (Rbm34), mRNA.
ACCESSION   NM_001014015 XM_226582
VERSION     NM_001014015.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC087155.1.
            
            On Apr 20, 2005 this sequence version replaced XM_226582.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC087155.1, SRR8487227.333177.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /map="19q12"
     gene            1..2900
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /note="RNA binding motif protein 34"
                     /db_xref="GeneID:307956"
                     /db_xref="RGD:1310161"
     exon            1..67
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     CDS             18..1304
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /codon_start=1
                     /product="RNA-binding protein 34"
                     /protein_id="NP_001014037.1"
                     /db_xref="GeneID:307956"
                     /db_xref="RGD:1310161"
                     /translation="MALRGEGRKRKKGQERRQSSEDDVGNAATDYLVGQVADSLRGGA
                     RPPGGGTGRLAALFSTPETLAPPVFVPVPQETSKKRKPDDEEETVAHIKKPALQEPAR
                     KVKVKKLSDADKRLANRESALANADLEEIRQDQGQGRRRSQSRGKVTDGEALDVALSL
                     NEDGRQRTKVPLNPEEERLKNERTVFVGNLPVTCNKKKLKSFFKEYGQVESVRFRSVM
                     PAEGTLSKKLAAIKRKFHPDQKSINAYVVFKEERAAAKALQRNGAQIAEGFRIRVDLA
                     SETASRDKRSVFVGNLPYRVDESALEEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFE
                     NTDAVHLALKLNNSELMGRKLRVMRSVNKEKLKQQNSNPSVKKDGSKSKQRLNFTSKE
                     GKSHSKNAFIGEKAVLMKKKKGQKKKGQTKKPRKQK"
     exon            68..239
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            240..373
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            374..608
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            609..668
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            669..712
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            713..796
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            797..860
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            861..900
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            901..1019
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
     exon            1020..2874
                     /gene="Rbm34"
                     /gene_synonym="RGD1310161"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaagattagt tttaagcatg gctttgagag gggagggacg caagagaaag aagggccagg
       61 agcggagaca gagctctgaa gacgacgtgg ggaatgcagc caccgactac ctggtgggac
      121 aggtcgccga cagcttgcgg ggcggcgcgc gcccccctgg aggagggaca gggcggctgg
      181 cagctctctt cagcaccccg gagacattgg ctccccctgt ctttgtgcct gtgccccagg
      241 aaacatctaa aaaaagaaaa cctgatgatg aagaagaaac tgtggcccac attaaaaagc
      301 cagctttgca agagcctgca agaaaagtga aagtgaagaa actctccgat gcagacaaga
      361 ggctggcaaa cagggaaagt gcgctggcga atgctgattt agaagagatt cgtcaagacc
      421 aagggcaggg aaggagaagg tctcagtctc ggggtaaagt gactgatgga gaagccctgg
      481 atgttgccct cagtctcaat gaggatgggc gccaaagaac aaaagtccca ctcaaccccg
      541 aagaggagcg gttaaaaaat gagaggaccg tgtttgttgg taatttgcct gtcacgtgta
      601 ataagaagaa gctgaagtcg ttttttaaag agtatggaca agtagaatcc gtacgatttc
      661 gttctgtgat gccagcagag gggacactat ccaagaagtt ggctgcaata aaacgtaaat
      721 ttcatcctga ccagaaaagc atcaatgcgt acgtagtgtt taaggaagag agagctgctg
      781 caaaggcgct gcagagaaat ggggcccaga ttgcagaagg atttcgtatt cgagttgatc
      841 tggcatctga aaccgcctct agggacaaga gatcagtatt tgtgggaaat cttccttaca
      901 gagtggatga gtctgctttg gaggagcact ttctggactg tgggagcatt gtggcagtga
      961 ggatcgtgag aaacccactc acaggagtcg gcagagggtt tggctatgtg ctctttgaga
     1021 acacagatgc tgttcatctt gctttgaagt taaataattc tgagctaatg ggaagaaaac
     1081 tgagagtcat gcgttctgtt aataaagaaa aactgaaaca acagaattca aatccaagcg
     1141 tgaagaaaga tggcagtaaa tctaagcaga gacttaattt tacttctaaa gaaggaaaat
     1201 cccattctaa gaatgcattt attggagaaa aggcagttct catgaaaaag aagaaaggac
     1261 aaaagaaaaa aggacaaacg aagaaaccaa ggaaacagaa gtaataacag actttgtccc
     1321 cttcctttct gtggtgaaac cttgcaatga gtgtctgggt ttttttatgg attgtgagga
     1381 aaatgtggag acttccacaa tgtctatcta ttttttttac taaattcatg ctatatgtaa
     1441 ggcctctctg aagcattgtt cttagaaatg tatttaaaga aaaataataa acattaatac
     1501 tctgtgttta ggccaggata ctgactctgg gtgtagtcat ggcccctaag aaagacttgt
     1561 gagctgttta taacacacat tcttcacctc tcatttttct ttctcttgaa attacagtgg
     1621 agatgtacat ttctatctta ttccatacag ctaataattg ctaaccagta agactgctaa
     1681 tagaagtggg actggcttct aatacatagt cagtgactac aggggtcatt gatttgcttg
     1741 gctataaagg gaaatgtgat gcttaagtta gtatcactca gaatgaaaca gctgtccctg
     1801 aaagtttaaa gacagcatct aatgaattat gttaattaaa ttgcaaactt tcaagctgaa
     1861 tgacagcaca acatgctgct gcattcccta agttccagac actgatctta ccaagagggg
     1921 ggacagggga atccaaagct gattcaggca ggcagagtcc agtaagtaca cacagtcctc
     1981 gagaggttta ttttctggtg catcgggttg acccttaatc agccccttgt ggcgagtgac
     2041 tggaaggaga ccccaaatgg ctgtaacaag cagtttttat actttcagag gtacaggtaa
     2101 ccagcaagtt tatagttcaa acttatatga catgcattcg agctctatct gggaacagag
     2161 gatcaggtga ctatcagtca gtactttcta tggattttca agaatgtccc tgttcctgag
     2221 aactgtgggt ggagagtgga acttggccca gccttgacct gaggccgtgg gggtgaaact
     2281 ggtgaaagcc cttagggtcc tcataaccta tctactttct tccaggccaa gcttcctaat
     2341 agctcttatg cttcagtaag aactagggtc cttcatgtag aaaacctaat gaggtgttta
     2401 aaacagccct agggactgga gagatggctt cttggttaag agcatgcact gctcttcaga
     2461 gagtacttaa gttcaattcc tagcatccat gtcaagcagt tcacaactgt ttgtaacttg
     2521 agctcctggg tccaactcct ctggcctctt gcactcacca atataaccta cacacacata
     2581 tgtacatata ctgagaaatg actcctgtga gtgagtggat taaagcatag gttatataca
     2641 tgcatacatg taattttatt attaaatacg tgtatgatgt gaatgcgggt acatgtggaa
     2701 ttcagaaaac aagttctctc attccacagc gtgtactttt actcactgag ccttctcact
     2761 ggccccagat atttcggaat ttgttactgt gtaattgttg aaatttctac tttggaatgt
     2821 atgtgctgct atgattgtgt aaatcattaa aaaactgtat tttgtagaaa aattaaaaaa
     2881 aaaaaaaaaa aaaaaaaaaa
//
