LOCUS       NM_001108703            1053 bp    mRNA    linear   ROD 23-MAR-2023
DEFINITION  Rattus norvegicus ribokinase (Rbks), mRNA.
ACCESSION   NM_001108703 XM_001062109 XM_343024
VERSION     NM_001108703.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1053)
  AUTHORS   Fragoza R, Das J, Wierbowski SD, Liang J, Tran TN, Liang S, Beltran
            JF, Rivera-Erick CA, Ye K, Wang TY, Yao L, Mort M, Stenson PD,
            Cooper DN, Wei X, Keinan A, Schimenti JC, Clark AG and Yu H.
  TITLE     Extensive disruption of protein interactions by genetic variants
            across the allele frequency spectrum in human populations
  JOURNAL   Nat Commun 10 (1), 4141 (2019)
   PUBMED   31515488
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473947.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_001062109.1, XM_343024.3.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMD00132303,
                              SAMD00155302 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1053
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q14"
     gene            1..1053
                     /gene="Rbks"
                     /note="ribokinase"
                     /db_xref="GeneID:362706"
                     /db_xref="RGD:1310064"
     exon            1..126
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     CDS             35..1006
                     /gene="Rbks"
                     /EC_number="2.7.1.15"
                     /codon_start=1
                     /product="ribokinase"
                     /protein_id="NP_001102173.1"
                     /db_xref="GeneID:362706"
                     /db_xref="RGD:1310064"
                     /translation="MAASGEPGRLWQEEEAAAVVVVGSCMTDLVSLTSRLPKTGETIH
                     GHKFFIGFGGKGANQCVQAARLGAKAAMVCKVGNDSFGNNYIENLKQNHISTEFTYQT
                     RDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLKKAAHVISRAKVMICQLEISPAA
                     SLEALTMARSSGVKTLFNPAPAIADLDPRFYTLSTVFCCNESEAEILTGHAVNDPTTA
                     GTAALVLLERGCQVVVITLGASGCVTLSQAEPVPKHIPTEAVKAVDTTGAGDSFVGAL
                     AFYLAYYPSLSLEEMLKRSNSIAAVSVQATGTQSSYPYKKDLPLALF"
     exon            127..259
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            260..323
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            324..386
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            387..551
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            552..643
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            644..832
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
     exon            833..1053
                     /gene="Rbks"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cagcgtccgg gttgagcaag agcgaggatt agtaatggcg gcgtcagggg agcccgggag
       61 gctctggcag gaggaagagg cggcagcagt ggtggtggtg ggttcctgca tgaccgacct
      121 ggtcagtctt acttctcgct tgccaaaaac tggagaaact atccatggac acaagttttt
      181 tattggcttt ggaggaaaag gtgccaacca gtgtgtccaa gctgcccgac tgggagcaaa
      241 ggcagccatg gtctgcaagg ttggcaatga ttcttttggc aataattaca tagaaaactt
      301 aaaacaaaat catatttcta cagagtttac ataccagacc agagatgcag ctacaggaac
      361 agcctccata attgtcaata atgaaggcca gaacatcatc gtcatagtgg ctggagcaaa
      421 tctgctcttg aatactgaag acttgaagaa ggcagcccat gtcattagcc gagccaaagt
      481 gatgatctgc cagctagaaa taagcccggc agcttctctg gaagccctga caatggcccg
      541 cagcagtgga gtgaaaacat tgttcaaccc agctccggcc attgctgacc tggacccccg
      601 gttctacacc ctctccactg tgttctgctg caacgagagt gaggctgaga tcctaacagg
      661 ccacgcagtg aatgacccaa ccacggctgg aacggctgcg ctggttctcc tagaacgggg
      721 ctgccaggtt gtggtcatca ccctaggggc ttcaggatgt gtgacactgt cacaggcaga
      781 acctgttcca aagcacattc ccacagaagc agtcaaggct gtggacacca cgggtgctgg
      841 tgacagtttt gtgggagcgc ttgccttcta cctggcttac tacccaagtc tgtccttgga
      901 agaaatgctc aagagatcta attccatcgc tgcggtcagc gtccaggcca caggaacaca
      961 gtcctcttat ccatacaaaa aagacctccc tcttgctcta ttttaaccac tgctaacccc
     1021 caaataaaca taatcttgaa attaaatggt cat
//
