LOCUS       NM_001108273            2229 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus RasGEF domain family, member 1C (Rasgef1c), mRNA.
ACCESSION   NM_001108273 XM_001071557 XM_340792
VERSION     NM_001108273.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2229)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_340792.3, XM_001071557.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760393,
                              SAMEA5760396 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q21-q22"
     gene            1..2229
                     /gene="Rasgef1c"
                     /note="RasGEF domain family, member 1C"
                     /db_xref="GeneID:360519"
                     /db_xref="RGD:1311549"
     exon            1..118
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            119..301
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..1525
                     /gene="Rasgef1c"
                     /codon_start=1
                     /product="ras-GEF domain-containing family member 1C"
                     /protein_id="NP_001101743.1"
                     /db_xref="GeneID:360519"
                     /db_xref="RGD:1311549"
                     /translation="MPRTLTASDMVTPGSLSPPPIDSTEGEQAGQPLLDGAPSSASLE
                     TLIQHLVPTADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQLDKPVLDKAR
                     VRKFGAKLLQLLAEWTETFPRDFEEESTIGHLTDVVGRISPCDETYGNRMHQLLQTLH
                     QKLASLGQGPEGLVGADKPISYRTKPPASIHRELLGVCSDPYTLAQQLTHVELERLRH
                     IGPEEFVQAFVNKDPLAGTKPRFNDKTNNVEAYVKWFNRLCYLVATEICMPAKKKQRA
                     QVIEFFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWAKVKTAKFFILEHQMDP
                     TGNFCNYRTALRGAAHRSLTAHSSREKIVIPFFSLLIKDIYFLNEGCANRLPNGHVNF
                     EKFLELAKQVGEFITWKQVECPFEQDPSITHYLYTAPIFSEDGLYLASYESESPENQT
                     EKERWKSLRSSILGKT"
     exon            302..424
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            425..562
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            563..763
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            764..838
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            839..928
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            929..1031
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1032..1111
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1112..1207
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1208..1303
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1304..1427
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1428..1500
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
     exon            1501..2229
                     /gene="Rasgef1c"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tcgcggcggg ctgcgagcgg gcgggtaggc agcgcccggt ctacggtgca gcggctgggg
       61 cgagcgcggc gggcgctgcc gatgggccgg gcccgggctg tcggagcgcc gggagccggc
      121 aggcatgccc cggacactga ctgcctccga catggtcacc ccaggcagcc tcagcccgcc
      181 tcccatagac tccacagaag gagagcaggc tgggcagccc ctcctggacg gagctccatc
      241 ctcagcctct ttggagaccc tgattcagca cctcgtgccc acagccgatt actatcctga
      301 gaaagcctac atcttcacct tcctgctgag ctctcgtctc ttcatcgagc cccgagagct
      361 cctggctcgt gtgtgtcacc tgtgcataga gcagcaacag ctggacaagc cggtgctgga
      421 caaggcccga gtccggaagt ttggtgccaa attgctccag ttgttagccg agtggactga
      481 aaccttccca cgggactttg aagaggagtc caccatcgga cacctgacag acgtggtggg
      541 ccgcatctcc ccatgtgacg agacctacgg aaacaggatg caccagctcc tgcagactct
      601 gcaccagaaa ttggcatcac ttggccaggg accagaaggc ctggtagggg cggacaagcc
      661 catctcctac aggaccaagc ctccagcctc aatccacagg gagctcctgg gtgtctgcag
      721 tgacccctac acactggccc agcaactgac ccatgtggag ctggagcggc ttaggcacat
      781 tgggcccgag gagtttgtcc aggcttttgt gaacaaggac cccctggcag gcacaaagcc
      841 ccgcttcaat gacaagacaa acaacgtaga ggcctacgtg aagtggttca acagactatg
      901 ctacctggta gccacagaaa tctgcatgcc agccaagaag aaacagaggg cacaggtgat
      961 cgagttcttc attgacgtgg cccgagagtg cttcaacatc ggcaacttca actccctcat
     1021 ggccattatc tccggcatga acatgagtcc tgtctccagg ctgaagaaga cttgggccaa
     1081 agtgaaaaca gccaagttct tcattctgga gcaccagatg gacccaacag ggaatttctg
     1141 caactatagg acagctctgc gtggggcagc ccaccgctca ctgactgctc acagcagcag
     1201 ggagaagatt gtcatcccct tcttcagcct gctcatcaag gacatttatt tcctcaatga
     1261 gggctgcgcc aaccgccttc ccaatggaca cgtcaatttt gagaaatttc tggaactggc
     1321 caagcaggtt ggagagttca ttacttggaa acaagtggaa tgtcctttcg agcaagatcc
     1381 aagcatcacc cattacctgt acaccgcacc catcttcagc gaagacggtc tgtatttggc
     1441 ttcctatgaa agcgaaagtc cagagaacca gacagaaaag gagaggtgga aatctctaag
     1501 atcttctatt ctggggaaga catgagaagc cctgagacag aggaagagga aacatcggag
     1561 ctgacacagg cagtcccaac cctgtcgcag atggcccaat gggtggaggt tgacgcaaag
     1621 cttctttact ttgtaaacca gacgctatga cctggtacct gccacaaagg ccacatgggc
     1681 acgggaaacc ttgcatagga cctcagccct ggctgacttg tcagggcctc caagagcatg
     1741 ggggacacgc cttgggcaaa cattgccttt atgaccaagt gggtcacata gtcagtctgt
     1801 ccattctgga cagggacaca gtgttacccg gatagctggg tgactgcgat catgtgattt
     1861 tgttgaatga cctgtgctat ggagagtaac gccacagtct gtcaccaggt ggcttgggag
     1921 cctctgtaac tgcagcgggc atcacggtgc aacatgagat gtccctgcac caggtccgag
     1981 cccactctag cccctggcat tccgctgacg ggccccaatc ccgtccctcc cagcggactt
     2041 gtttctgcag tcacccatct ccttctgcat cctgctggta tcaggatagc cccctggcga
     2101 ctgcggtgaa acaagtcact gagacaaacc ggagtcatgg agtcagcaat gtgtatatta
     2161 caacctgctg cctagctccc ttgtaaactt tagagtcgga gtaaactcat gtttgtacgc
     2221 ccatcctgc
//
