LOCUS       XM_232315               3292 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RasGEF domain family, member 1A
            (Rasgef1a), transcript variant X1, mRNA.
ACCESSION   XM_232315
VERSION     XM_232315.9
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_232315.10.
            
            On Jan 21, 2021 this sequence version replaced XM_232315.8.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3292
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3292
                     /gene="Rasgef1a"
                     /note="RasGEF domain family, member 1A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 11 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     19 samples with support for all annotated introns"
                     /db_xref="GeneID:312664"
                     /db_xref="RGD:1305836"
     CDS             136..1605
                     /gene="Rasgef1a"
                     /codon_start=1
                     /product="ras-GEF domain-containing family member 1A
                     isoform X1"
                     /protein_id="XP_232315.7"
                     /db_xref="GeneID:312664"
                     /db_xref="RGD:1305836"
                     /translation="MFLERQEAMPQTSVVFSGTLGPNCNRPVQPGMGERGGGASSGSK
                     DLIFQDGRLTSGSLEALMEHLVPTVDYYPDRTYIFTFLLSSRVFMPPHDLLARVGQIC
                     LEQRQQLEAGPEKAKLKSFSTKIVQLLKEWTEAFPYDFQDEKAMAELKAIAHRVTQCD
                     EENGTVKKAITQMIQSLLLSLAARSQLQELREKLRSPVVDKGPVLKAKPPAAQKDILG
                     VCSDPLVLAQQLTHIELERVNSIRPEDLMQIISHMDSLDNHRCRGDMTKTYSLEAYDN
                     WFNCLSMLVATEVCRVVKKKHRTRMLEFFIDVARECFNIGNFNSMMAIISGMNLSPVA
                     RLKKTWSKVKTAKFDVLEHHMDPSSNFCNYRTALQGATQRSQTANSSREKIVIPVFNL
                     FVKDIYFLHKIHTNHLPSGHINFKKFWEISRQIHEFMTWTRVECPFEKDKKIQSYLLT
                     APIYSEEALFIASFESEGPENHMEKDSWKALRTTLLNRA"
ORIGIN      
        1 cccgcccagg ccgggaggtg tctaggccac cgagggaagt cccggggctt gggcggcact
       61 ggctcagccc cggagggtag tcgagagctt ctacaccgtc tgagggtcgg tcaggtagcg
      121 ggagccgcag ccaggatgtt tctggagcgc caggaagcta tgccccagac atctgtggtc
      181 ttctccggca cccttgggcc caactgtaac agaccggtgc agcctggcat gggggaaaga
      241 ggaggtgggg ccagcagcgg ctccaaggac ctcatttttc aagatggacg cctcacttcc
      301 gggtccttgg aggccttgat ggagcacctg gtcccgacgg tggactatta tcctgatcgg
      361 acatacatct tcacgtttct cctgagttca cgggtcttca tgccccctca tgaccttctg
      421 gctcgagtag ggcagatctg cctggagcag aggcaacagc tagaggctgg gcccgagaag
      481 gccaagctga agtccttctc taccaagatt gtgcaactgt tgaaggagtg gacggaggcc
      541 ttcccttacg acttccagga tgagaaggcc atggcggagc tcaaggccat cgcacaccgc
      601 gtcactcagt gtgacgagga gaacggcaca gtgaagaaag ccattaccca aatgatacaa
      661 agtttgctgc tgtccctggc tgcccgaagt cagctccaag agctgcggga gaagctccgg
      721 tcaccagttg tggacaaagg gcctgtcctt aaggccaagc caccagccgc ccagaaagac
      781 atcctgggtg tgtgtagcga ccccctggtg ctggcccagc agctgactca catcgaactg
      841 gagcgggtca acagtatccg ccctgaggac ctgatgcaga tcatcagcca catggactcc
      901 ttggacaatc acaggtgccg aggagacatg actaagacct acagtttgga agcctatgac
      961 aactggttca actgcttgag catgcttgtg gctacagagg tgtgccgggt ggtaaagaag
     1021 aaacaccgga cccggatgct ggagttcttc attgatgtgg cccgagagtg tttcaacatt
     1081 gggaacttca actccatgat ggccatcata tctggcatga acctcagtcc agtggcacgg
     1141 ctgaagaaaa cgtggtccaa agtcaagaca gccaagtttg atgtcttgga gcaccacatg
     1201 gacccctcca gcaacttctg caactaccgc acagccctgc agggggcgac gcagaggtcc
     1261 cagacagcca acagcagtcg cgagaagatt gtcatacctg tgttcaacct cttcgttaag
     1321 gacatctact ttctgcacaa aatccacacc aaccacctgc ccagtgggca cattaacttc
     1381 aaaaaatttt gggaaatctc cagacagatc catgagttca tgacatggac acgggtagag
     1441 tgtccctttg agaaggacaa gaagattcag agttacctgc tcacggcgcc catctacagc
     1501 gaggaagctc tcttcatcgc ctcctttgaa agtgaaggtc ctgagaatca catggagaag
     1561 gacagctgga aggcactcag gactactctc ctaaacagag cctgaggaca cagcctgcgg
     1621 atgccagatg aaggataaaa cagaatcacg ttgaagttgt gatgggtata ggataagagt
     1681 ggcgaggcct cactggctgg ggtccatttt gtatataact tttatgacca agaaaaccgt
     1741 aattatctca cgcatcagcc ttcggcgctt acacagtcct ctcttttttt gttgttgttg
     1801 ttatttattt taaacggggc agggccctgt tttggggagg ggcgggaaag agtatcatgg
     1861 gagatggtaa ccatggtaac accttattct aatgaaatgt agatttttat tttctacttt
     1921 tgatgattaa catcctataa agaaaattta aaataaccca accaaaacca atgtgagccc
     1981 tgcctgctcg gacgcctctc cagccagtgt ctctgatgtt ggggttagtg ccttagaggg
     2041 tactgggggt ccagtcttcc tgttccattg ttggaactga agccaactct gtcctgtgcc
     2101 acaaggagcc caccctcagc agcctgggcc accaggttcc cacaggaagg gctggagggg
     2161 ccaggctgtc tcgtgtgcac acttctggaa gggaaccttt ccatagggct ttccaaagtt
     2221 tacattttca ttttcctttt tcagggattt atggggttgg gaggggcaag gggacgcctg
     2281 acaacatatt ttctgtgaga atatgtttgg caaatcattc ttcaattgtg ttttagaaga
     2341 ggttttaaaa aaaatgctgt gacgatctcg ggagagcatt gtagtgctgt cagtcttcca
     2401 ggcgcggaga cgctgcaagg gagaacgcac aaagcagact cgaggatggc aaagctgtgt
     2461 ctgaagcggg tacacaaaga gaaggaaaag aaaaatgggt gtgtggcaca cagcctcccc
     2521 tccctctggt aggaaccccc ctccccccat gggtaatctg aaactctatc agccaggcag
     2581 cctccaccac ccggagcact tccggattaa actgcccaac acagagcagt gcacttctga
     2641 tccaaacagg ggattggggt tcatctttcc tgtcgacttc ctggcgtgga ccctgggtct
     2701 tacggatcat gggtgggatg gctctgtccc tcagacagct ggaatatcta cactgacttg
     2761 cttggcttgg gtgggagctg ccagtcaaga ggcccagtgt ggaatggatg gtcccattcc
     2821 cagagcttcg ttagacagcc tggagatggc tggccaggcc atcgggaggt gggcgaagtg
     2881 gtcactctca gccttgggga gccgagtagc tacactgtat tgtcacagtg tgtttgcact
     2941 tttcagacct tctagccggt atagattgta tattgatggt acatatcgat ttgtttgtgt
     3001 ctttgagaga aaggctggaa gcttgagaat atatatttgg aatataatgt tcgagcattt
     3061 tctgtacatg tgttaagagc cttcagtcca tgtgtgcttc aggggtcact ggttccagta
     3121 tcttcttgag aaagtgtcta cattgctatt ttaccgcccc ggtttgatac acactccatt
     3181 cgatgttttg gtatttggag ttgatctctg atataaagct gtaccatatg caggatgtca
     3241 gttgtggtgt gactggatgt acttgcatca ataaaagaac atgttgctct tc
//
