LOCUS       NM_001399356            2323 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus RAN binding protein 3 (Ranbp3), mRNA.
ACCESSION   NM_001399356 XM_576696
VERSION     NM_001399356.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Dai,F., Lin,X., Chang,C. and Feng,X.H.
  TITLE     Nuclear export of Smad2 and Smad3 by RanBP3 facilitates termination
            of TGF-beta signaling
  JOURNAL   Dev Cell 16 (3), 345-357 (2009)
   PUBMED   19289081
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Mueller,L., Cordes,V.C., Bischoff,F.R. and Ponstingl,H.
  TITLE     Human RanBP3, a group of nuclear RanGTP binding proteins
  JOURNAL   FEBS Lett 427 (3), 330-336 (1998)
   PUBMED   9637251
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Jan 6, 2022 this sequence version replaced XM_576696.8.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.816618.1,
                                           SRR26360176.2304747.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-67                JAXUCZ010000009.1  1594474-1594540
            68-123              JAXUCZ010000009.1  1605859-1605914
            124-160             JAXUCZ010000009.1  1616332-1616368
            161-232             JAXUCZ010000009.1  1616445-1616516
            233-298             JAXUCZ010000009.1  1620543-1620608
            299-391             JAXUCZ010000009.1  1620960-1621052
            392-519             JAXUCZ010000009.1  1622574-1622701
            520-633             JAXUCZ010000009.1  1625420-1625533
            634-737             JAXUCZ010000009.1  1626750-1626853
            738-813             JAXUCZ010000009.1  1627059-1627134
            814-916             JAXUCZ010000009.1  1627735-1627837
            917-1026            JAXUCZ010000009.1  1628053-1628162
            1027-1147           JAXUCZ010000009.1  1629143-1629263
            1148-1290           JAXUCZ010000009.1  1630171-1630313
            1291-1477           JAXUCZ010000009.1  1630463-1630649
            1478-2323           JAXUCZ010000009.1  1630742-1631587
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2323
                     /gene="Ranbp3"
                     /note="RAN binding protein 3"
                     /db_xref="GeneID:501281"
                     /db_xref="RGD:1589604"
     exon            1..67
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     CDS             46..1521
                     /gene="Ranbp3"
                     /codon_start=1
                     /product="ran-binding protein 3"
                     /protein_id="NP_001386285.1"
                     /db_xref="GeneID:501281"
                     /db_xref="RGD:1589604"
                     /translation="MADLANEEKPAVAPSVFVFQKDKGQKRSAGSSSPEAGEDSDHED
                     GNYCPPVKRERTSSLTHSEEKSSGFRLKPPTLIHGQAPSAGLPSQKPREQQRGVLRPA
                     VLQAPQPKVLSQTVPSSGTNGVSMPADCTGPATSASPENLTQRSPSESAEGTHTFEEK
                     VPQKTPSGGSEETHCEEEQVAPQAFVFGQNLRDRVKLMNEKANVADVDSAAHPGSETP
                     TATNYFLQYISSSADNSTHSADTSTKFVFGQNMSERVLSPPKLNEANSDTSRETTHAQ
                     SGSESSSQEAVPKKESLAESAAAYTKATAWTCLLEKVEVITGEEAESNVLQIQCKLFV
                     FDKTSQSWVERGRGLLRLNDMASADDGTLQSRLVMRTQGSLRLILNTKLWAQMQMDKA
                     SEKSIRITATDAEDQGVKVFLISASSKDTGQLYAALHHRILALRSRAEQEQEAKAPPP
                     EPGATRAAEEEDSDEDAVLAPSGVTGAGAGDDGDGQATGST"
     exon            68..123
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            124..160
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            161..232
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            233..298
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            299..391
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            392..519
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            520..633
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            634..737
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            738..813
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            814..916
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            917..1026
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1027..1147
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1148..1290
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1477
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
     exon            1478..2323
                     /gene="Ranbp3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgggggccgg gcgcggggcc ttgtgggagg gcttaaggaa gtaaaatggc ggacctggcg
       61 aacgaagaaa agcctgctgt tgcaccgtcc gtctttgtgt ttcagaagga caaaggacag
      121 aagagatctg ctggcagttc cagtccggaa gccggagaag actctgatca tgaggatgga
      181 aactattgcc ctcctgtcaa gcgcgagcgg acatcatctc taacgcattc agaggagaag
      241 agcagcggct tccggctgaa gcccccaacg cttatccacg ggcaggcacc cagtgcaggt
      301 ctgcccagcc agaaacccag ggaacagcag cgtggtgtgc tccgtccagc tgtgctgcag
      361 gccccacagc ccaaggtgct gtcacagacg gtccccagca gtggcaccaa tggggtcagt
      421 atgccagcgg actgcacggg gccagccact tctgcatcac cagaaaacct cacacagagg
      481 agtccctctg agtctgccga ggggacacac acatttgagg agaaggtacc tcagaaaacc
      541 ccaagtggag gctcagagga gacgcactgt gaagaggagc aggtggcccc acaggccttc
      601 gtgtttggac agaatttgag agacagagtg aagttaatga atgagaaggc caatgtggca
      661 gatgtagaca gtgccgcaca tcccggctca gaaacaccca ctgcgaccaa ctacttcctg
      721 cagtatatca gttccagcgc agacaactcg acccacagtg ctgacacctc caccaagttt
      781 gtgtttggcc agaacatgag tgagcgcgtc ttgagccccc caaagctgaa cgaagccaat
      841 tcagacacca gcagggagac tacacatgcc cagtcagggt ctgagtcgtc atcccaggag
      901 gccgtcccca agaaagagtc cctggccgag tcagctgctg cctataccaa ggctacagca
      961 tggacgtgtt tgctggagaa agtggaggtc attacagggg aggaggcaga gagcaatgtg
     1021 ctgcagatcc agtgtaagct gtttgtgttt gacaagacat cacagtcatg ggtggagcgt
     1081 ggccggggac ttctcagact caatgacatg gcgtcagccg acgatggcac attacagtcc
     1141 cggctagtga tgcggaccca gggcagcctg cggctcatcc tgaacacgaa gctgtgggca
     1201 cagatgcaga tggacaaggc cagtgaaaag agcatccgca tcacagccac ggacgctgag
     1261 gaccagggcg tcaaggtctt cctgatctcg gccagctcca aagacacagg ccaactgtat
     1321 gctgcgttgc accaccgcat cctggctctg cgtagccggg ccgaacagga acaggaggcc
     1381 aaggcacccc cacctgagcc aggagccacc cgggctgccg aggaggaaga cagtgatgag
     1441 gatgctgtgc tggctccttc aggtgtcacg ggggccggcg caggcgatga cggtgatggt
     1501 caggctactg ggagcacata gcagcggagc cgctgtacca ggctgctgct tcgtcgtctg
     1561 tctgctgctg cccatccctc cctgcaggcc gtgtcatggt ggtgtctatt gccggggtgg
     1621 ccacaggctg gatccgagtg tcccctctgc agcagacggg gacgccagga tgcggcttgg
     1681 gactcagacc tcatcatatt gatgagcaga aagaacgttc cccgccttcg tccgatcgaa
     1741 atggcacatt gacacttgtc acagcttcgt ggtgaccatc cctccctggg cagtgacagt
     1801 gagaagtctg agctcagcat tctgctgagt gacctgctgc ctgctcggct ttcctctgcc
     1861 aggcctaagt ggcagctgcc tcttgttctc tggtggcttg gctccccagg tcgagtgaag
     1921 ctacactcgg gctgagctga cttgacgctc ttctgggtgg tgcccagccc acacaggggc
     1981 tccgtaagtt gggtcctgag aacacctgtc tggatgaagg ttttggagcc aggagacttt
     2041 ctgccctctt gcctgccaac ctgaaccacc ggggtcaccc ttagcatagc acagccctga
     2101 ggtgactgac catcctgtgg actgtgtggt cccacctctg gcctggccac tcccggggag
     2161 ccagcaagga caccagaggc tgcctagcag gtgggccaca ctgcttccag ccttagccag
     2221 ccagtgacaa gtgaatccag acgtcaccca tgtgttttgg aacatttatg taagattgtc
     2281 atatgaaatg tatttgagaa ctgcattaaa acttttaact aaa
//
