LOCUS       NM_001105957            5064 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus ral guanine nucleotide dissociation stimulator
            like 1 (Ralgdsl1), mRNA.
ACCESSION   NM_001105957 XM_001070966 XM_008769609 XM_222717
VERSION     NM_001105957.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5064)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000013.1.
            
            On or before Dec 5, 2020 this sequence version replaced
            XM_008769609.2, NM_001105957.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360194.2498293.1,
                                           SRR26360181.790884.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760389,
                                           SAMEA5760393 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-389               JAXUCZ010000013.1  67453631-67454019   c
            390-556             JAXUCZ010000013.1  67349512-67349678   c
            557-667             JAXUCZ010000013.1  67294795-67294905   c
            668-876             JAXUCZ010000013.1  67260632-67260840   c
            877-954             JAXUCZ010000013.1  67237814-67237891   c
            955-1139            JAXUCZ010000013.1  67224226-67224410   c
            1140-1264           JAXUCZ010000013.1  67221139-67221263   c
            1265-1480           JAXUCZ010000013.1  67219465-67219680   c
            1481-1584           JAXUCZ010000013.1  67215905-67216008   c
            1585-1669           JAXUCZ010000013.1  67211830-67211914   c
            1670-1759           JAXUCZ010000013.1  67207401-67207490   c
            1760-1846           JAXUCZ010000013.1  67205075-67205161   c
            1847-1879           JAXUCZ010000013.1  67203710-67203742   c
            1880-2001           JAXUCZ010000013.1  67201252-67201373   c
            2002-2091           JAXUCZ010000013.1  67199253-67199342   c
            2092-2278           JAXUCZ010000013.1  67196712-67196898   c
            2279-2533           JAXUCZ010000013.1  67192309-67192563   c
            2534-2648           JAXUCZ010000013.1  67188769-67188883   c
            2649-5064           JAXUCZ010000013.1  67184402-67186817   c
FEATURES             Location/Qualifiers
     source          1..5064
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /map="13q21"
     gene            1..5064
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /note="ral guanine nucleotide dissociation stimulator like
                     1"
                     /db_xref="GeneID:289080"
                     /db_xref="RGD:1308947"
     exon            1..389
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            390..556
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     CDS             425..2836
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation
                     stimulator-like 1"
                     /protein_id="NP_001099427.2"
                     /db_xref="GeneID:289080"
                     /db_xref="RGD:1308947"
                     /translation="MEEKSVGEPTQVVSKVKLSTKVENPGHWLVDDHARIWEVLKTEE
                     SSIQDWGEEVEEGAVYHVTLKRVQIQQAANKGARWLGVEGDQLPPGHTVSQYETCKIR
                     TIKAGTLEKLVENLLTAFGDNDFTYISIFLSTYRGFASTKEVLELLLDRYGNLTGPHW
                     EDDGSQSSPESKAVIRNAIASILRAWLDQCAEDFREPPHFPCLQKLLEYLKQMMPGSD
                     PERRAQNLLEQFQKQDVDSDNGLLNTISFSPEEEEELESGGSAELTTFSEDLVAEQLT
                     YMDAQLFKKVVPHHCLGCVWSRRDRKENKHLAPTIRATISQFNALTKCVVSTILGSKD
                     LKTQQRARVIEKWINIAHECRILKNFSSLRAIVSALQSNSIYRLKKAWAAVPKDRMLM
                     FEELSEIFSDHNNHLTSRELLMKEGTSKFANLDSSVKENQKRTQRRLQLQKDMGVMQG
                     TVPYLGTFLTDLTMLDTALQDYIEGGLINFEKRRREFEVIAQIKLLQSACNSYCMSPD
                     QKFIQWFQRQQLLTEEESYALSCEIEAAADASTTSPKPRKSMVKRLSLLFLGSDLIPG
                     STPTKEQPKSTASGSSGESMDSVSVSSCESNHSEAEEGSATPMDTPDEPQKKLSESSS
                     SCSSIHSMDTNSSGMSSLINPLSSPPACNNNPKMHKRSVSVTSITSTVLPPVYNQQNE
                     DTCIIRISVEDNNGNMYKSIMLTSQDKTPAVIQRAMSKHNLESDPAEEYELVQVISED
                     KELVIPDSANVFYAMNSQVNFDFILRKKSSVEEQVKMRSRTSLTMPRTAKRGCWSNRH
                     SKVTL"
     exon            557..667
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            668..876
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            877..954
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            955..1139
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1140..1264
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1265..1480
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1481..1584
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1669
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1670..1759
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1760..1846
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1847..1879
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            1880..2001
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2002..2091
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2092..2278
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2279..2533
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2534..2648
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
     exon            2649..5064
                     /gene="Ralgdsl1"
                     /gene_synonym="Rgl1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggtcttgggc tggaggctat gggcacttgg ggcgcgtggc ctggagtgct gccgccgtcg
       61 gtgccagccg cttgttgttg gggtccggtg tgaagtgtgg gtggtcggac ttaagcgtgg
      121 ggtgggatgg actggctgca gaacctagtc ccctgcagtc agcgggagaa tgaggcggag
      181 tgatgcccag cacgaaacta gtgatcggag ccctccattc ggaccgagcg ccgccggggg
      241 ctgcgttcca gagctgagag ccccttccgg ggcttgggat cttggcacgc tgtcggtggg
      301 aggtccccaa ggacggagtc gaaaggtcac ttcttacctg tcagtgctgg gggacagcat
      361 cgcggccgga cctgcagaat ctcaactcgc agattcgtaa tgcctcctgc ttacctcttt
      421 caagatggag gagaaatctg tgggagaacc tactcaagtg gtgtctaaag tcaaactttc
      481 cacaaaagta gaaaacccag gacactggct ggtggatgat cacgctcgaa tatgggaagt
      541 tttaaagaca gaggagagct cgattcagga ctggggtgaa gaggtagagg aaggagctgt
      601 ttaccatgtc accctcaaaa gagtccagat tcaacaggcg gccaataaag gagcaagatg
      661 gctaggggtt gaaggggacc agctgcctcc aggacacaca gtcagtcagt atgagacctg
      721 taagatcagg accatcaaag ctggcacact ggagaagctt gtggagaacc tgctgacagc
      781 ttttggggac aacgacttta cctacatcag catcttcttg tcaacatata gaggctttgc
      841 ctcgaccaag gaagttctgg agttgctact ggacaggtat ggaaacttga caggcccaca
      901 ttgggaagac gatggaagcc aaagttcacc tgagtctaag gccgtgatcc ggaacgccat
      961 tgcttccatc ctgagggcgt ggcttgacca gtgtgcggaa gacttccggg agccccctca
     1021 cttcccctgc ctgcagaagc tgctggagta tctcaaacag atgatgcctg gctccgaccc
     1081 agagaggaga gcacaaaacc ttcttgaaca gtttcaaaag caggatgtgg attctgacaa
     1141 tggacttctc aacaccatct ccttcagccc ggaagaggaa gaggaactgg agagtggagg
     1201 gtcagcagaa ctcacgacct tctcagaaga cctcgtggca gagcagctga cctacatgga
     1261 cgcacaactg ttcaagaagg tcgtaccgca ccactgcctg ggctgcgttt ggtctcggcg
     1321 ggatagaaag gaaaacaagc atttggcccc taccatccgg gccaccatct ctcagttcaa
     1381 cgccctcacc aagtgtgtgg tcagcaccat cctggggagc aaggacctca aaacccagca
     1441 gcgagccaga gtcatcgaga agtggatcaa cattgctcac gaatgtagaa tcctgaagaa
     1501 tttttcctcc ttgagggcca tcgtttccgc tctacagtct aattccatct atcggttgaa
     1561 aaaggcatgg gctgccgtcc ccaaggacag aatgctgatg tttgaagaac tttcagagat
     1621 cttctctgat cataacaacc atctcaccag ccgggaactt ctcatgaagg aaggaacctc
     1681 aaaatttgca aacctggaca gcagtgtgaa agaaaaccag aagcggaccc agaggcgcct
     1741 gcagctgcag aaggatatgg gtgtgatgca gggcaccgtg ccttacctgg gcaccttcct
     1801 gactgacctg accatgctgg acactgccct gcaggactac attgagggtg gactgatcaa
     1861 cttcgagaaa agaagaaggg aatttgaggt gattgcccag ataaagctcc tacagtctgc
     1921 ttgcaacagc tactgcatga gcccagacca gaagttcatc cagtggttcc agaggcagca
     1981 gcttctaaca gaggaggaga gctatgccct ctcctgtgag atcgaagccg ctgctgacgc
     2041 cagcaccact tcccctaagc ctcggaagag catggtgaag agactgagcc tactgtttct
     2101 ggggtctgac ctcatccccg ggagcacccc caccaaagag cagcccaagt ccacagccag
     2161 tgggagctct ggggagagta tggactcagt cagcgtgtca tcctgtgagt caaaccactc
     2221 agaggccgag gagggctccg ccacacccat ggacacacca gatgagcctc agaagaagct
     2281 ctctgagtcc tcctcctcct gctcctccat ccattccatg gacacgaatt cctcagggat
     2341 gtcgtccctc atcaacccgc tgtcctctcc tccagcctgc aacaacaacc ctaaaatgca
     2401 caagcgctcc gtctccgtga cgtccattac ctccacagtg ctgcctcctg tttacaatca
     2461 gcagaatgaa gacacctgca tcatccgcat cagcgtagag gacaacaacg gcaacatgta
     2521 caagagcatc atgttgacga gccaagataa gacccccgct gtgatccaga gagcgatgtc
     2581 aaagcacaat ctggagtcgg acccagccga ggagtatgaa ctggtacaag tcatctcgga
     2641 ggacaaagag ctggtgatcc cagactctgc aaatgtcttt tatgccatga atagccaagt
     2701 gaactttgat ttcattttac gcaaaaagag ctcggtggag gagcaggtga agatgcgcag
     2761 tcggaccagc ctgacgatgc ccaggacagc taagcggggc tgctggagta acagacacag
     2821 caaggtcacc ctctgaaggg acagggcgaa gctgagcaca gccgtggtga tgccaaccac
     2881 ccagggttga ggatcattgc tgaaagcgcc agatacttat ggagctcagc tgtgtagaga
     2941 gcactgcgtg gggagagtgg aagtgaattt aacatcaaaa ggataaatgg ttcactgacg
     3001 ctctcaggcc tgagagtgaa tacaaaatgg ttcatatttt aaaatatata tatatacaca
     3061 cacatatcgt gtgtgtgtgt gtgtgtgcgt gcgcgtgcgt gcgtgcgtgc gtgcgtgcgt
     3121 gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgg atataccaga gggactatac
     3181 aggatatttt ggactatgga aaaaccaatt tgcacaatgg cctgggaagt tgaggtcact
     3241 ttttacaggg aaacagaagg gactgagcac ctgatctcac accttccaag taaatagaat
     3301 cagacctgcc aataccaagt gttcttcatg ccagtattac aagcccaagc tctgattttg
     3361 taaagggacg agaggattac tttctcagtc acgtgccacc agatgaccaa actgcagagg
     3421 ttggagtggc cacaggctgc atgaaaggcc accatggaaa ggttcggatg agtcagtggt
     3481 ctctgccctc tgctggcgtc tgctggagct tcagaggcct gcgtgccttg ctggtcccca
     3541 taacaatgct ccaggggtca acacacgctt gtttcaattc ctggaaaccc tgttgtgttt
     3601 ctgccttctc tcctaaagaa cataccacag tcattaccgc ataagtagcc tccgtcttct
     3661 gtgacatttc agccagagaa gaaagcgcag aagaacagcg gctcctctgg actcttctcc
     3721 gtcttggacc actcggccgc cctctgatgg ccctttgcat gtaaaagcgt agtctggtct
     3781 tttgccatct ggaaccccgt acccctctct tatgtgcaat ccgttcctca ggtgtagaca
     3841 tttctactgc agttggctac atgcaatcat tccgagcctg taaaagattt ctgagcagcg
     3901 gcctctctgt taatgacccc tcagaaaatg tccccgttga ctaatggtgg ctaatttcca
     3961 ccttcacttt tgtagcatcc tgtgctccag tcacagggag agaaagggga ctgcggtgct
     4021 gtctccgccc tttctcagag aggcgcaccc gtgtagatgg gaacaatagt gctcttcctt
     4081 tctcccccca cacttgctct cccagccaca ctggtaggtg atgggttttg tttgtagtaa
     4141 tcacagcacc atactcgtgc ttccggtctg agctatgctg ggatctggat gaaaaagcca
     4201 tatgtgacgg agctgacatg tataagaagc actttcaaat tattgtccct ttttaatttt
     4261 ttctccaaat gccagttttt attccaaaaa taaagagaat caacccagaa tatgatgtcc
     4321 agattgtaac agggagtttc ttttctaacc ctgtactata gctccccaag atgatgtagg
     4381 ggttgtgttc tgtaaatagc tgtatgaact caacaagaaa caccgggaaa agctcagatg
     4441 cgtggcagtg gaccaaagcg agggccagga agtcatgatt cccttgtctt gcacattctg
     4501 acaccagatg gaccctggtg tttctcggag actggcctgg agcgtggaga ccagctagct
     4561 ttcagctggt catcagaagg caccttctgt tgtttgtgag ccttctttgg ttagtgcttc
     4621 tgagcacaga ggggaaatgg caaggactgc agccatcagg aagctgaggt aaacctagcc
     4681 tcagcctggc tttctcagtg tcagggaatc agtgcagagc tactgccctg gtttgggtgt
     4741 gactcacaag acatacgtgt tatgaccatg tgctcaccct gtgtaattat actgtatatg
     4801 tagagcctag atttatatac tgcaatgtaa aaaaaaaaat atatatatat atatatatat
     4861 ttaccttttt acaaaaagac aatggaaatc ccaagtgggg taaaacatgg cctcctttat
     4921 ttaatgccac ttcagttgtt ttaattttgc ttctgggtaa acagctgggt tttgtttcca
     4981 gctgctcgca cgcttgtcct tgtgcatctc cagcatctgt ttaccttttg gttaaactaa
     5041 taaaccggtt tgggacttgg ttga
//
