LOCUS       XM_006233753            3697 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ral guanine nucleotide dissociation
            stimulator (Ralgds), transcript variant X5, mRNA.
ACCESSION   XM_006233753
VERSION     XM_006233753.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233753.3.
            
            On Aug 7, 2014 this sequence version replaced XM_006233753.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3697
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3697
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /note="ral guanine nucleotide dissociation stimulator;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 34 ESTs, 2 long SRA reads, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 184 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
     CDS             389..2911
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X5"
                     /protein_id="XP_006233815.1"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
                     /translation="MMVDCQSSTQEIGEELINGVIYSISLRKVQLHPGATKGQRWLGC
                     ENESALNLYETCKVRTVKAGTLEKLVEHLVPAFQGSDLSYVTVFLCTYRAFTTTQQVL
                     DLLFKRYGCILPYSSEDGGPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVAY
                     VQLNMPGSDLERRAHLLLAQLEDLEPSEVEPEALSPAPVLSLKPASQLEPAPALLLTP
                     SRAVASTPVREPAPVPVLASSPVVAPASELEPALEPPLDPEPTLAPAPELDPTVSQSL
                     HLEPAPVPAPALEPSWPLPETTENGLCAKPHLLLFPPDLVAEQFTLMDAELFKKVVPY
                     HCLGSIWSQRDKKGKEHLAPTIRATVAQFNNVANCVITTCLGDQSMKASDRARVVEHW
                     IEVARECRVLKNFSSLYAILSALQSNAIHRLKKTWEEVSRGSFRVFQKLSEIFSDENN
                     YSLSRELLIKEGTSKFATLEMNPRRTQRRQKETGVIQGTVPYLGTFLTDLVMLDTAMK
                     DYLYGRLINFEKRRKEFEVIAQIKLLQSACNNYSIVPEEHFGAWFRAMGRLSEAESYN
                     LSCELEPPSESASNTLRSKKSTAIVKRWSDRQAPSTELSTSSSAHSKSCDQLRCSPYL
                     SSGDITDALSVHSAGSSSSDVEEINMSFVPESPDGQEKKFWESASQSSPETSGISSAS
                     SSTSSSSASTTPVSTTRTHKRSVSGVCSYSSSLPLYNQQVGDCCIIRVSLDVDNGNMY
                     KSILVTSQDKAPTVIRKAMDKHNLDEDEPEDYELLQIISEDHKLKIPENANVFYAMNS
                     AANYDFILKKRAFTKGAKVKHGASSTLPRMKQKGLRIARGIF"
ORIGIN      
        1 gtctagtcct cagcgtcccg caaggaagga ggtcgagcgc gtccccgagc tcgctcaccg
       61 gggcccgccc ctcgcacctg cgggcgagct gggcggggcc ggggcggggc cgcactgtct
      121 ccgcccactc gtcccgagcc ccgggagctc cggcggaacc gagcagcgag gccctaaaag
      181 gccgtgagcg cggcgaggcg aggcgcggtg cagacaatgg gagcggcatt ggcgagagcc
      241 gcggagctcc gggcctggcg aggaccggag gccgcgccat gagccccgca gccggacgcc
      301 ccgctgcgcc gcgcgcgggc cgaggcgagc ggcctctgcg agtcccgggc cgcgccctgg
      361 ggctggcgat gagctgccga ggctgaggat gatggtagat tgccagagct ctacgcagga
      421 gattggggag gagctgatca acggggtcat ctactccatc tccctgcgca aggttcagct
      481 acacccagga gccaccaagg gccagcgctg gctagggtgc gagaatgagt cagctctgaa
      541 cctctacgag acttgcaagg tgcgcacggt gaaggccggt actctggaga agctggtgga
      601 acacctggtg cctgccttcc agggcagtga cctttcctac gtcaccgtat tcctgtgcac
      661 ctacagagcc ttcacaacca ctcagcaggt gctagacctg ctgttcaaaa gatatggctg
      721 catccttccc tactccagtg aggacggcgg accacaggac caactcaaaa atgccatctc
      781 ttccatcctg ggcacctggc tggaccaata ctccgaggac ttctgtcaac ccccggactt
      841 tccctgcctc aagcagctgg tggcttatgt gcagctcaac atgcctggct cagacctgga
      901 gcgccgtgct caccttctcc tggcccagct ggaggacctg gagcccagtg aggttgagcc
      961 tgaggccctg tccccagctc cagtgctgtc tctgaaacca gcttcacagc tagaaccagc
     1021 tcccgccctg cttctgacgc ccagccgagc tgtggcatcc actccagtcc gagagccagc
     1081 cccggtgcca gtactggcat ccagcccggt ggtggcgcca gcctctgagc tagaaccagc
     1141 tctggagccg cccctagacc ctgagccaac cctcgcacct gctccagagc tggaccccac
     1201 tgtctcacag agcctccacc tcgagcccgc tcccgtgccc gctcctgcat tagagccttc
     1261 ctggcctctg cctgaaacca cggagaacgg actgtgtgca aagcctcacc tactgctgtt
     1321 ccctccagac ttggtggctg aacagtttac gctgatggac gcagagctat tcaagaaagt
     1381 tgtgccctac cactgcctgg gctccatctg gtcccagcgg gacaagaagg gcaaggagca
     1441 cctcgcgccc accatccgtg ccactgtcgc ccagttcaac aacgtggcca actgtgtcat
     1501 caccacctgc cttggggacc agagtatgaa agcttcggac agggcccggg tggtggaaca
     1561 ctggatcgag gtggccaggg agtgcagggt gctcaagaat ttctcctccc tctacgccat
     1621 cctctctgcc ctacagagca atgccatcca ccgcctaaag aagacatggg aagaggtctc
     1681 caggggcagc tttcgagtgt tccagaaact gtcagaaatc ttctctgatg agaacaacta
     1741 ctccttgagc agagagctgc tcatcaagga aggaacctcc aagtttgcca cgctggagat
     1801 gaaccctagg agaacccaga ggcggcagaa ggagacaggt gtcatccagg gcactgtccc
     1861 ctacctgggc acattcctca ctgacctggt gatgctggac acagccatga aggactatct
     1921 atatgggaga ctgatcaact ttgaaaagag gaggaaggag ttcgaagtca tcgcccagat
     1981 caagttgctc cagtcggcct gcaacaacta cagcattgtt cccgaggagc actttggagc
     2041 ctggttccga gccatgggac ggctcagcga ggctgagagc tacaacctgt cgtgtgagct
     2101 ggagcccccg tctgagtcag ccagcaacac cctgaggagc aagaaaagca cagctatcgt
     2161 caagcgctgg agcgaccgcc aggctcccag cacggagctc agcaccagta gcagtgcaca
     2221 ctccaagtca tgtgaccagc tccggtgcag cccctacctc agcagcgggg acatcacgga
     2281 cgcactcagt gtgcactcag ctggttcatc cagctctgac gtggaggaga tcaacatgag
     2341 ctttgttcca gagtctcctg atggccagga aaagaagttc tgggagtcag cctcccagtc
     2401 gtccccagag acctctggca tcagctcggc ctccagcagc acctcctctt cgtcagcctc
     2461 taccacaccg gtgtctacca cacgcaccca caagcgctct gtctcagggg tctgcagcta
     2521 cagctcctca ctgccactct acaaccagca ggtgggcgac tgctgcatca tcagggtcag
     2581 cctggatgtg gacaacggca acatgtacaa gagcatcctg gtgaccagcc aggataaggc
     2641 tccgactgtc atccggaaag ccatggacaa acacaaccta gatgaggacg agcccgagga
     2701 ctatgagctg ctgcagatca tctcagagga ccacaagctg aaaattccag agaacgccaa
     2761 tgtgttctat gccatgaact ctgccgccaa ctatgacttc atcctaaaga agcgggcctt
     2821 cactaagggg gctaaagtca agcatggagc cagctccact ctccctcgaa tgaagcagaa
     2881 gggactcagg attgccagag gcatcttcta aggacgtctc ccaggggctg gctggctggc
     2941 tggggactaa gcacttacag actagagtgg cccaggccac acaggtacct ctgccctcct
     3001 gccagcccag gctactccca gactccactt tcaccccgaa cctgtcctgc tgccgggatt
     3061 gacacctgcc actgacaggc tgacctggcc tccggggacc gctcaccgcc ttaggtgcct
     3121 tctgctctct gcaaccagag gactagctga ctttgccaag gggtgctgcc agctgggcat
     3181 ggagcctcgc ctgccctgga caatgtccac cacactttcc tgtcacctcc ccaagtgcag
     3241 atcactgcca cccatgctcc cagatgctcc aggacaccca cacacccagc ggggctgcca
     3301 actgcgttct ctccttgtgc ccataggcac tggcctggga ccttcatgga ggtcctagcc
     3361 tttcttaggc tgcaccaaag attccacctt cagggcctac agagtgaggg agtctcgccc
     3421 accacgagcc caagccctcc catggatcag agagagaagc cctctcatgg accgcctggt
     3481 tggcattgaa ccccatacca ctgaaagtgc cattcaccac cgctgcgtcc cgggtgtaca
     3541 agactacatg caatgggagg tttgtgggga gggggaagac gactggatat ttgtataaaa
     3601 cgtaaaaagt ttactgattg gggtggggca atatttattt gttgtaaata gaaaatgcta
     3661 gacttgaata ttatattaaa atcccgtttc tactatg
//
