LOCUS       XM_006233752            3733 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ral guanine nucleotide dissociation
            stimulator (Ralgds), transcript variant X3, mRNA.
ACCESSION   XM_006233752
VERSION     XM_006233752.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233752.3.
            
            On Aug 7, 2014 this sequence version replaced XM_006233752.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3733
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /note="ral guanine nucleotide dissociation stimulator;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 34 ESTs, 2 long SRA reads, 10 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 186 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
     CDS             389..2947
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X3"
                     /protein_id="XP_006233814.1"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
                     /translation="MMVDCQSSTQEIGEELINGVIYSISLRKVQLHPGATKGQRWLGC
                     ENESALNLYETCKVRTVKAGTLEKLVEHLVPAFQGSDLSYVTVFLCTYRAFTTTQQVL
                     DLLFKRYGRCDALTASSRYGCILPYSSEDGGPQDQLKNAISSILGTWLDQYSEDFCQP
                     PDFPCLKQLVAYVQLNMPGSDLERRAHLLLAQLEDLEPSEVEPEALSPAPVLSLKPAS
                     QLEPAPALLLTPSRAVASTPVREPAPVPVLASSPVVAPASELEPALEPPLDPEPTLAP
                     APELDPTVSQSLHLEPAPVPAPALEPSWPLPETTENGLCAKPHLLLFPPDLVAEQFTL
                     MDAELFKKVVPYHCLGSIWSQRDKKGKEHLAPTIRATVAQFNNVANCVITTCLGDQSM
                     KASDRARVVEHWIEVARECRVLKNFSSLYAILSALQSNAIHRLKKTWEEVSRGSFRVF
                     QKLSEIFSDENNYSLSRELLIKEGTSKFATLEMNPRRTQRRQKETGVIQGTVPYLGTF
                     LTDLVMLDTAMKDYLYGRLINFEKRRKEFEVIAQIKLLQSACNNYSIVPEEHFGAWFR
                     AMGRLSEAESYNLSCELEPPSESASNTLRSKKSTAIVKRWSDRQAPSTELSTSSSAHS
                     KSCDQLRCSPYLSSGDITDALSVHSAGSSSSDVEEINMSFVPESPDGQEKKFWESASQ
                     SSPETSGISSASSSTSSSSASTTPVSTTRTHKRSVSGVCSYSSSLPLYNQQVGDCCII
                     RVSLDVDNGNMYKSILVTSQDKAPTVIRKAMDKHNLDEDEPEDYELLQIISEDHKLKI
                     PENANVFYAMNSAANYDFILKKRAFTKGAKVKHGASSTLPRMKQKGLRIARGIF"
ORIGIN      
        1 gtctagtcct cagcgtcccg caaggaagga ggtcgagcgc gtccccgagc tcgctcaccg
       61 gggcccgccc ctcgcacctg cgggcgagct gggcggggcc ggggcggggc cgcactgtct
      121 ccgcccactc gtcccgagcc ccgggagctc cggcggaacc gagcagcgag gccctaaaag
      181 gccgtgagcg cggcgaggcg aggcgcggtg cagacaatgg gagcggcatt ggcgagagcc
      241 gcggagctcc gggcctggcg aggaccggag gccgcgccat gagccccgca gccggacgcc
      301 ccgctgcgcc gcgcgcgggc cgaggcgagc ggcctctgcg agtcccgggc cgcgccctgg
      361 ggctggcgat gagctgccga ggctgaggat gatggtagat tgccagagct ctacgcagga
      421 gattggggag gagctgatca acggggtcat ctactccatc tccctgcgca aggttcagct
      481 acacccagga gccaccaagg gccagcgctg gctagggtgc gagaatgagt cagctctgaa
      541 cctctacgag acttgcaagg tgcgcacggt gaaggccggt actctggaga agctggtgga
      601 acacctggtg cctgccttcc agggcagtga cctttcctac gtcaccgtat tcctgtgcac
      661 ctacagagcc ttcacaacca ctcagcaggt gctagacctg ctgttcaaaa ggtacggtag
      721 atgtgacgcc ctcacggcct cctctagata tggctgcatc cttccctact ccagtgagga
      781 cggcggacca caggaccaac tcaaaaatgc catctcttcc atcctgggca cctggctgga
      841 ccaatactcc gaggacttct gtcaaccccc ggactttccc tgcctcaagc agctggtggc
      901 ttatgtgcag ctcaacatgc ctggctcaga cctggagcgc cgtgctcacc ttctcctggc
      961 ccagctggag gacctggagc ccagtgaggt tgagcctgag gccctgtccc cagctccagt
     1021 gctgtctctg aaaccagctt cacagctaga accagctccc gccctgcttc tgacgcccag
     1081 ccgagctgtg gcatccactc cagtccgaga gccagccccg gtgccagtac tggcatccag
     1141 cccggtggtg gcgccagcct ctgagctaga accagctctg gagccgcccc tagaccctga
     1201 gccaaccctc gcacctgctc cagagctgga ccccactgtc tcacagagcc tccacctcga
     1261 gcccgctccc gtgcccgctc ctgcattaga gccttcctgg cctctgcctg aaaccacgga
     1321 gaacggactg tgtgcaaagc ctcacctact gctgttccct ccagacttgg tggctgaaca
     1381 gtttacgctg atggacgcag agctattcaa gaaagttgtg ccctaccact gcctgggctc
     1441 catctggtcc cagcgggaca agaagggcaa ggagcacctc gcgcccacca tccgtgccac
     1501 tgtcgcccag ttcaacaacg tggccaactg tgtcatcacc acctgccttg gggaccagag
     1561 tatgaaagct tcggacaggg cccgggtggt ggaacactgg atcgaggtgg ccagggagtg
     1621 cagggtgctc aagaatttct cctccctcta cgccatcctc tctgccctac agagcaatgc
     1681 catccaccgc ctaaagaaga catgggaaga ggtctccagg ggcagctttc gagtgttcca
     1741 gaaactgtca gaaatcttct ctgatgagaa caactactcc ttgagcagag agctgctcat
     1801 caaggaagga acctccaagt ttgccacgct ggagatgaac cctaggagaa cccagaggcg
     1861 gcagaaggag acaggtgtca tccagggcac tgtcccctac ctgggcacat tcctcactga
     1921 cctggtgatg ctggacacag ccatgaagga ctatctatat gggagactga tcaactttga
     1981 aaagaggagg aaggagttcg aagtcatcgc ccagatcaag ttgctccagt cggcctgcaa
     2041 caactacagc attgttcccg aggagcactt tggagcctgg ttccgagcca tgggacggct
     2101 cagcgaggct gagagctaca acctgtcgtg tgagctggag cccccgtctg agtcagccag
     2161 caacaccctg aggagcaaga aaagcacagc tatcgtcaag cgctggagcg accgccaggc
     2221 tcccagcacg gagctcagca ccagtagcag tgcacactcc aagtcatgtg accagctccg
     2281 gtgcagcccc tacctcagca gcggggacat cacggacgca ctcagtgtgc actcagctgg
     2341 ttcatccagc tctgacgtgg aggagatcaa catgagcttt gttccagagt ctcctgatgg
     2401 ccaggaaaag aagttctggg agtcagcctc ccagtcgtcc ccagagacct ctggcatcag
     2461 ctcggcctcc agcagcacct cctcttcgtc agcctctacc acaccggtgt ctaccacacg
     2521 cacccacaag cgctctgtct caggggtctg cagctacagc tcctcactgc cactctacaa
     2581 ccagcaggtg ggcgactgct gcatcatcag ggtcagcctg gatgtggaca acggcaacat
     2641 gtacaagagc atcctggtga ccagccagga taaggctccg actgtcatcc ggaaagccat
     2701 ggacaaacac aacctagatg aggacgagcc cgaggactat gagctgctgc agatcatctc
     2761 agaggaccac aagctgaaaa ttccagagaa cgccaatgtg ttctatgcca tgaactctgc
     2821 cgccaactat gacttcatcc taaagaagcg ggccttcact aagggggcta aagtcaagca
     2881 tggagccagc tccactctcc ctcgaatgaa gcagaaggga ctcaggattg ccagaggcat
     2941 cttctaagga cgtctcccag gggctggctg gctggctggg gactaagcac ttacagacta
     3001 gagtggccca ggccacacag gtacctctgc cctcctgcca gcccaggcta ctcccagact
     3061 ccactttcac cccgaacctg tcctgctgcc gggattgaca cctgccactg acaggctgac
     3121 ctggcctccg gggaccgctc accgccttag gtgccttctg ctctctgcaa ccagaggact
     3181 agctgacttt gccaaggggt gctgccagct gggcatggag cctcgcctgc cctggacaat
     3241 gtccaccaca ctttcctgtc acctccccaa gtgcagatca ctgccaccca tgctcccaga
     3301 tgctccagga cacccacaca cccagcgggg ctgccaactg cgttctctcc ttgtgcccat
     3361 aggcactggc ctgggacctt catggaggtc ctagcctttc ttaggctgca ccaaagattc
     3421 caccttcagg gcctacagag tgagggagtc tcgcccacca cgagcccaag ccctcccatg
     3481 gatcagagag agaagccctc tcatggaccg cctggttggc attgaacccc ataccactga
     3541 aagtgccatt caccaccgct gcgtcccggg tgtacaagac tacatgcaat gggaggtttg
     3601 tggggagggg gaagacgact ggatatttgt ataaaacgta aaaagtttac tgattggggt
     3661 ggggcaatat ttatttgttg taaatagaaa atgctagact tgaatattat attaaaatcc
     3721 cgtttctact atg
//
