LOCUS       XM_006233751            3673 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ral guanine nucleotide dissociation
            stimulator (Ralgds), transcript variant X2, mRNA.
ACCESSION   XM_006233751
VERSION     XM_006233751.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006233751.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006233751.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3673
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3673
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /note="ral guanine nucleotide dissociation stimulator;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 35 ESTs, 2 long SRA reads, 10 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
     CDS             200..2887
                     /gene="Ralgds"
                     /gene_synonym="Rgds"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation stimulator
                     isoform X2"
                     /protein_id="XP_006233813.1"
                     /db_xref="GeneID:29622"
                     /db_xref="RGD:3533"
                     /translation="MISGKNLALVLGKRAAVSQRAWLPPPLPSRALVFCFTLLWGETT
                     RLLDQSSTQEIGEELINGVIYSISLRKVQLHPGATKGQRWLGCENESALNLYETCKVR
                     TVKAGTLEKLVEHLVPAFQGSDLSYVTVFLCTYRAFTTTQQVLDLLFKRYGRCDALTA
                     SSRYGCILPYSSEDGGPQDQLKNAISSILGTWLDQYSEDFCQPPDFPCLKQLVAYVQL
                     NMPGSDLERRAHLLLAQLEDLEPSEVEPEALSPAPVLSLKPASQLEPAPALLLTPSRA
                     VASTPVREPAPVPVLASSPVVAPASELEPALEPPLDPEPTLAPAPELDPTVSQSLHLE
                     PAPVPAPALEPSWPLPETTENGLCAKPHLLLFPPDLVAEQFTLMDAELFKKVVPYHCL
                     GSIWSQRDKKGKEHLAPTIRATVAQFNNVANCVITTCLGDQSMKASDRARVVEHWIEV
                     ARECRVLKNFSSLYAILSALQSNAIHRLKKTWEEVSRGSFRVFQKLSEIFSDENNYSL
                     SRELLIKEGTSKFATLEMNPRRTQRRQKETGVIQGTVPYLGTFLTDLVMLDTAMKDYL
                     YGRLINFEKRRKEFEVIAQIKLLQSACNNYSIVPEEHFGAWFRAMGRLSEAESYNLSC
                     ELEPPSESASNTLRSKKSTAIVKRWSDRQAPSTELSTSSSAHSKSCDQLRCSPYLSSG
                     DITDALSVHSAGSSSSDVEEINMSFVPESPDGQEKKFWESASQSSPETSGISSASSST
                     SSSSASTTPVSTTRTHKRSVSGVCSYSSSLPLYNQQVGDCCIIRVSLDVDNGNMYKSI
                     LVTSQDKAPTVIRKAMDKHNLDEDEPEDYELLQIISEDHKLKIPENANVFYAMNSAAN
                     YDFILKKRAFTKGAKVKHGASSTLPRMKQKGLRIARGIF"
ORIGIN      
        1 tgggctccac tcacccacag cctctcccag ctctctgctg acccttggtg tgggcttctc
       61 tgctcgggcc aagctgcacc agaacaacct atagttagcc gatggccaga gagccactgc
      121 ctaaaattgc ttctggccag ccaggaaaga aggaagatcc ttgtgctgaa ccagagctga
      181 cttggcatct cagagcaaga tgatttctgg gaagaacctg gctcttgttc tagggaaaag
      241 ggcggctgtt tcccagagag cctggctgcc acctccccta ccttcccgtg ctttggtgtt
      301 ttgcttcact ctcctctggg gcgagacaac gcgtctgctg gatcagagct ctacgcagga
      361 gattggggag gagctgatca acggggtcat ctactccatc tccctgcgca aggttcagct
      421 acacccagga gccaccaagg gccagcgctg gctagggtgc gagaatgagt cagctctgaa
      481 cctctacgag acttgcaagg tgcgcacggt gaaggccggt actctggaga agctggtgga
      541 acacctggtg cctgccttcc agggcagtga cctttcctac gtcaccgtat tcctgtgcac
      601 ctacagagcc ttcacaacca ctcagcaggt gctagacctg ctgttcaaaa ggtacggtag
      661 atgtgacgcc ctcacggcct cctctagata tggctgcatc cttccctact ccagtgagga
      721 cggcggacca caggaccaac tcaaaaatgc catctcttcc atcctgggca cctggctgga
      781 ccaatactcc gaggacttct gtcaaccccc ggactttccc tgcctcaagc agctggtggc
      841 ttatgtgcag ctcaacatgc ctggctcaga cctggagcgc cgtgctcacc ttctcctggc
      901 ccagctggag gacctggagc ccagtgaggt tgagcctgag gccctgtccc cagctccagt
      961 gctgtctctg aaaccagctt cacagctaga accagctccc gccctgcttc tgacgcccag
     1021 ccgagctgtg gcatccactc cagtccgaga gccagccccg gtgccagtac tggcatccag
     1081 cccggtggtg gcgccagcct ctgagctaga accagctctg gagccgcccc tagaccctga
     1141 gccaaccctc gcacctgctc cagagctgga ccccactgtc tcacagagcc tccacctcga
     1201 gcccgctccc gtgcccgctc ctgcattaga gccttcctgg cctctgcctg aaaccacgga
     1261 gaacggactg tgtgcaaagc ctcacctact gctgttccct ccagacttgg tggctgaaca
     1321 gtttacgctg atggacgcag agctattcaa gaaagttgtg ccctaccact gcctgggctc
     1381 catctggtcc cagcgggaca agaagggcaa ggagcacctc gcgcccacca tccgtgccac
     1441 tgtcgcccag ttcaacaacg tggccaactg tgtcatcacc acctgccttg gggaccagag
     1501 tatgaaagct tcggacaggg cccgggtggt ggaacactgg atcgaggtgg ccagggagtg
     1561 cagggtgctc aagaatttct cctccctcta cgccatcctc tctgccctac agagcaatgc
     1621 catccaccgc ctaaagaaga catgggaaga ggtctccagg ggcagctttc gagtgttcca
     1681 gaaactgtca gaaatcttct ctgatgagaa caactactcc ttgagcagag agctgctcat
     1741 caaggaagga acctccaagt ttgccacgct ggagatgaac cctaggagaa cccagaggcg
     1801 gcagaaggag acaggtgtca tccagggcac tgtcccctac ctgggcacat tcctcactga
     1861 cctggtgatg ctggacacag ccatgaagga ctatctatat gggagactga tcaactttga
     1921 aaagaggagg aaggagttcg aagtcatcgc ccagatcaag ttgctccagt cggcctgcaa
     1981 caactacagc attgttcccg aggagcactt tggagcctgg ttccgagcca tgggacggct
     2041 cagcgaggct gagagctaca acctgtcgtg tgagctggag cccccgtctg agtcagccag
     2101 caacaccctg aggagcaaga aaagcacagc tatcgtcaag cgctggagcg accgccaggc
     2161 tcccagcacg gagctcagca ccagtagcag tgcacactcc aagtcatgtg accagctccg
     2221 gtgcagcccc tacctcagca gcggggacat cacggacgca ctcagtgtgc actcagctgg
     2281 ttcatccagc tctgacgtgg aggagatcaa catgagcttt gttccagagt ctcctgatgg
     2341 ccaggaaaag aagttctggg agtcagcctc ccagtcgtcc ccagagacct ctggcatcag
     2401 ctcggcctcc agcagcacct cctcttcgtc agcctctacc acaccggtgt ctaccacacg
     2461 cacccacaag cgctctgtct caggggtctg cagctacagc tcctcactgc cactctacaa
     2521 ccagcaggtg ggcgactgct gcatcatcag ggtcagcctg gatgtggaca acggcaacat
     2581 gtacaagagc atcctggtga ccagccagga taaggctccg actgtcatcc ggaaagccat
     2641 ggacaaacac aacctagatg aggacgagcc cgaggactat gagctgctgc agatcatctc
     2701 agaggaccac aagctgaaaa ttccagagaa cgccaatgtg ttctatgcca tgaactctgc
     2761 cgccaactat gacttcatcc taaagaagcg ggccttcact aagggggcta aagtcaagca
     2821 tggagccagc tccactctcc ctcgaatgaa gcagaaggga ctcaggattg ccagaggcat
     2881 cttctaagga cgtctcccag gggctggctg gctggctggg gactaagcac ttacagacta
     2941 gagtggccca ggccacacag gtacctctgc cctcctgcca gcccaggcta ctcccagact
     3001 ccactttcac cccgaacctg tcctgctgcc gggattgaca cctgccactg acaggctgac
     3061 ctggcctccg gggaccgctc accgccttag gtgccttctg ctctctgcaa ccagaggact
     3121 agctgacttt gccaaggggt gctgccagct gggcatggag cctcgcctgc cctggacaat
     3181 gtccaccaca ctttcctgtc acctccccaa gtgcagatca ctgccaccca tgctcccaga
     3241 tgctccagga cacccacaca cccagcgggg ctgccaactg cgttctctcc ttgtgcccat
     3301 aggcactggc ctgggacctt catggaggtc ctagcctttc ttaggctgca ccaaagattc
     3361 caccttcagg gcctacagag tgagggagtc tcgcccacca cgagcccaag ccctcccatg
     3421 gatcagagag agaagccctc tcatggaccg cctggttggc attgaacccc ataccactga
     3481 aagtgccatt caccaccgct gcgtcccggg tgtacaagac tacatgcaat gggaggtttg
     3541 tggggagggg gaagacgact ggatatttgt ataaaacgta aaaagtttac tgattggggt
     3601 ggggcaatat ttatttgttg taaatagaaa atgctagact tgaatattat attaaaatcc
     3661 cgtttctact atg
//
