LOCUS       XM_017590720            4384 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus retinoic acid induced 14 (Rai14),
            transcript variant X7, mRNA.
ACCESSION   XM_017590720
VERSION     XM_017590720.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017590720.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4384
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4384
                     /gene="Rai14"
                     /note="retinoic acid induced 14; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 37
                     ESTs, 3 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 22 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:294804"
                     /db_xref="RGD:1305942"
     CDS             160..2709
                     /gene="Rai14"
                     /codon_start=1
                     /product="ankycorbin isoform X5"
                     /protein_id="XP_017446209.1"
                     /db_xref="GeneID:294804"
                     /db_xref="RGD:1305942"
                     /translation="MVTHGVDVTAQDSSGHSALHIAAKNGHPEYIKKLLQYKSPAESV
                     DNLGKTALHYAAAQGSLQAVQVLCEHKSPINLKDLDGNIPLLVAIQNGHSEACHFLLD
                     HGADVNSRDKNGRTALMLACETGSANTVEALIKKGADLNLVDSLGHNALYYSKLSENA
                     GIQSLLLSKISQDADLKTPTKAKQAEISSIQENKDRLSDSTAGADSLLDVSSEADQQD
                     LLVLLQAKVASLTLHNKELQDKLQAKSPKETEADLSFQSFHSTQTDLAPSPSKSSDIP
                     SSDAKSSPPVEHPAGTSTADRDVIIQQLQDTLHDLQKRLETSEAEKKQLQDELQSQRT
                     DTTCLNNTEISENGSDLSQKLKDTQSKYEEAMKEVLSVQKQMKLGLLSHESADGDSRL
                     REVRVTDEDVDALKQDLQRALEESKRDKARVQELETKLVEKEKAEATKPSSEVCEEMR
                     NSYCSVIENMNKEKAFLFEKYQQAQEEIMKLKDTLKSQMPQEAPDDSGDMKETMNRMV
                     DELNKQVSELSQLYREAQAELEDYRKRKSLEDATEYIHRAEHERLMHLSNLSRTKAEE
                     SLSDMRSQYSKVLNELTQLKQLVDAHKENSVSITEHLEVITTLRTMAKEMEEKTVTLQ
                     EHLASKEGEVAKLEKQLAEEKAAMSDAMVPKASYEKLQASLESEVNALAAKLKESVKE
                     KEKAHSEVAQVRSEVSQAKREKENIQTLLKSKEQEVTELVQKFQRAQEELAGLKRCSE
                     TSSKLEEDKDEKINEMTKEVLKLKEALNSLSQLSYSTSSSKRQTQQLEMLQQQVKQLQ
                     NQLAECKKQHQEVVSVYRMHLLYAVQGQMDEDVQKVLKQILTMCKNQSQKK"
ORIGIN      
        1 ggcccggagc tgaggcagcc gcttggatgg ggtattgaca aatctcctag gactttggaa
       61 ggctgaatgg actaaacatg aagagcctga aagcgaagtt taggaagagc gactttccac
      121 cttgctgctg caaaaggaca cgtggaatgc ctcaaggtca tggttacaca cggtgtggat
      181 gtgactgccc aagactcttc cggtcacagt gctttacata tcgcagccaa gaatggccac
      241 ccagagtaca tcaagaagct tcttcagtac aagagcccag ccgaaagtgt tgacaacttg
      301 gggaaaacag ctttgcatta tgcagcggca caggggagcc ttcaagctgt acaagtcctc
      361 tgcgaacaca agagccccat aaacctcaaa gacttggatg ggaacatacc cctgctcgtc
      421 gcaatacaaa atggccacag tgaggcctgc cactttctcc tggaccatgg cgcagatgtc
      481 aattccaggg acaaaaatgg aagaactgct ctcatgctgg cgtgcgaaac tggcagtgct
      541 aacactgtgg aagccttaat taaaaagggg gcagacctga accttgtaga ttctcttgga
      601 cacaatgcct tatattattc caaactctca gaaaatgcag gaattcagag ccttctatta
      661 tcaaaaatct ctcaggatgc tgatttaaag accccaacaa aagcaaagca ggctgagatc
      721 agctccatac aagaaaacaa agacaggctg agcgacagta ctgcaggtgc tgacagctta
      781 ttagatgtaa gttctgaagc tgaccaacaa gatcttcttg tcctattgca agcaaaagtc
      841 gcttccctta ccttacacaa taaggagtta caagataaat tgcaggccaa atcacccaag
      901 gaaactgaag ccgacctaag ctttcagtct ttccattcca cccagactga cctagcccca
      961 tccccgagca aatctagtga catcccttcc tccgatgcca aatcatcccc gcctgttgaa
     1021 catccggcgg ggacatccac cgctgacagg gatgtcataa tccagcagct acaagatacc
     1081 ttgcatgatt tgcagaagag attggagacc tctgaagcag agaagaaaca gctccaggac
     1141 gaactccagt cacaaaggac agacacgaca tgcttgaaca acacagagat ttccgaaaat
     1201 ggctccgacc tcagtcagaa actcaaagac actcagagca agtacgaaga ggccatgaaa
     1261 gaagtcctga gcgtgcagaa gcagatgaag ctgggtctcc tctcccacga gagtgccgat
     1321 ggcgactcgc gtctccgaga ggtgagggtc actgatgaag acgttgacgc actaaagcaa
     1381 gacctgcaga gagcactgga agagagtaaa agggacaagg cacgggtgca ggagttagag
     1441 acaaagctcg tggagaaaga aaaggctgaa gcgactaagc cgtcctcaga ggtgtgcgag
     1501 gagatgagaa actcctactg ctctgtcatc gagaatatga ataaggagaa ggcatttttg
     1561 tttgagaaat accagcaggc ccaagaagaa atcatgaaac taaaggacac actaaaaagt
     1621 cagatgccac aggaagcccc cgatgactct ggggacatga aagagaccat gaacaggatg
     1681 gttgacgagc tcaataagca ggtgagcgag ctgtcacagc tctacagaga agcccaggca
     1741 gagctggagg attacaggaa gaggaagtct ctagaagacg caaccgaata cattcacaga
     1801 gcggaacacg agaggctgat gcacctgtca aacctgtcca ggaccaaagc ggaagaatcg
     1861 ctgtccgaca tgaggtctca atattccaag gtgctgaacg agttgactca gctcaagcag
     1921 ctggtggatg cgcacaaaga gaactccgtg tccatcacag agcatctgga agtaataacc
     1981 acgctgcgga cgatggccaa agagatggaa gagaaaacag tcaccctcca agagcacctc
     2041 gcaagcaagg aaggggaagt cgcaaagctg gagaagcagc tcgcagagga gaaagccgcc
     2101 atgagcgacg caatggtccc caaggcttcc tacgagaagc tccaggcctc cctggagagc
     2161 gaagtcaacg cgttggcagc aaagttaaag gagtcggtga aagagaaaga gaaagcccat
     2221 tctgaggtcg cccaggttcg aagtgaggtc tcgcaggcga aaagggaaaa ggaaaacatc
     2281 cagactctct tgaaatccaa agagcaggaa gtaactgaac ttgtgcagaa attccagcga
     2341 gctcaggaag aactggccgg gttgaaaaga tgctctgaga cctcgtcgaa gctggaggag
     2401 gacaaagacg aaaagataaa tgaaatgacc aaggaggtcc tgaagctgaa ggaggccctg
     2461 aacagcctct cgcagctctc atactccaca agctcgtcca agaggcagac ccagcaactg
     2521 gaaatgctac agcagcaggt caagcagctg cagaaccagc tggctgaatg taagaaacaa
     2581 caccaggagg tcgtatccgt ttacagaatg catcttctat atgctgtaca gggccaaatg
     2641 gatgaagatg tccagaaagt cttgaagcag atcctcacca tgtgtaaaaa ccagtctcag
     2701 aagaagtaaa acagattcat tggcaaggca ctgccccttg ttgcctctct ttctgttaaa
     2761 tctggagttg tcactgacca ctgccgttct tatccatggt gtgcactgtg acctagcata
     2821 gcttcttttc cagaagatgc cctcttcaga actgcatagg tactccagac cagcaggggt
     2881 gaaaggccct gctctttctt cagaatctag aactgggatc agccacaccc aaaagtctgg
     2941 tctaccttct ttggtacctg accataggag aggcttcact gatctgctga ggccttggtg
     3001 cagtgagtgg tccttgatcc ctgcctttgg actgtgccat tcagcacagg agagcatttt
     3061 gccttccatt tcctaaacat ggtttaattc ctaaccaaac taaaatgaca ctacaagtga
     3121 gtgcttaaga ccctttatcc tgtggattta aaaactctac tctgtccccc cagctgcctt
     3181 aaatctcacc accctgctta tagtctcaca gtttggtgag tgccgttaac taaaacacaa
     3241 agttttaagt ccagagtgaa ctctccctta acagttttta agtaaatcaa cacattgtag
     3301 attttctatg caaacttgcc tagaaaactt tccacaatgc tcaggaagcc cagatatttt
     3361 tatttcaaca gaggacagta aactgtgtgt ttacagccaa aagacatgcc tcacggttct
     3421 taacctcgat ttttaaaaag tgttttgttt cctctatgat atttttattg gcttttaaag
     3481 atgttttcat agctaaagcc ctaagtgaga ttagatgata ttaacattat ttttagatga
     3541 acatacttaa gacttcttaa aaatgtaact ttttcctcaa aagtcttcag ccatagatcg
     3601 cacagggtag ttaaatattc cactcagtgt gagctgctca gtacccctcg gactttctgt
     3661 agtctatttc tgagtgtagt aaatcctcct cttgcccgtt gaatttgtaa acgccccaaa
     3721 ctctcgccca tgagtcgttc ctgaaaggac tgtcagttcc agtcagcttc tccatgttga
     3781 aagtaagagc ctcaacatgc cagcatggtg catagcaaag cctgggggaa ttaggcctgt
     3841 tgactttcct ttcaggttac aaaggtttga cctacttgca gcttctcttt atggccccga
     3901 tgatgaaata aagaacttct ggtgtgttac taaaagtaga gtccactctg acagggccca
     3961 tcgactgcag ggctgcctcg gctctgaggc cacttggctg acttgggtgt gttcatctgt
     4021 cttaggtgat ggtcaatacc agcaggacta aagtggcaat acttttcata agttgcccga
     4081 tcacggttaa gcatttctca aaatgccccc aaagaaatgt gaaaggattt gccacgcacg
     4141 gaacctaaga aatgaccaag ccacctcccc ttgtgcctcc acacggaaat gctgcagtgt
     4201 gtaaacttga gacattttgt aggatgcctg acgaagtgta gcctttcttc ttgtgtcagg
     4261 atgcatattt attacaagta ttctggttaa atattgagaa gttatatgct gtagtttagc
     4321 ttttttttgt ctttgtaata atttacagaa attattgcgg gaaataaaca tggttcattt
     4381 tgca
//
