LOCUS       NM_001161691            1203 bp    mRNA    linear   ROD 22-MAR-2023
DEFINITION  Rattus norvegicus retinoic acid early transcript 1L like 1
            (Raet1ll1), mRNA.
ACCESSION   NM_001161691 XM_001054610
VERSION     NM_001161691.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1203)
  AUTHORS   Zhuo M, Fujiki M, Wang M, Piard-Ruster K, Wai LE, Wei L, Martinez
            OM and Krams SM.
  TITLE     Identification of the rat NKG2D ligands, RAE1L and RRLT, and their
            role in allograft rejection
  JOURNAL   Eur J Immunol 40 (6), 1748-1757 (2010)
   PUBMED   20306467
  REMARK    GeneRIF: We cloned and expressed two rat NKG2D ligands RAE1L and
            RRLT, and demonstrate that these ligands can induce IFN-gamma
            secretion and cytotoxicity by rat NK cells
REFERENCE   2  (bases 1 to 1203)
  AUTHORS   Savithri B and Khar A.
  TITLE     A transmembrane-anchored rat RAE-1-like transcript as a ligand for
            NKR-P2, the rat ortholog of human and mouse NKG2D
  JOURNAL   Eur J Immunol 36 (1), 107-117 (2006)
   PUBMED   16323246
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from FJ971664.1.
            
            On Jun 12, 2009 this sequence version replaced XM_001054610.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FJ971664.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676807 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1203
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="LEW"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1p13"
     gene            1..1203
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /note="retinoic acid early transcript 1L like 1"
                     /db_xref="GeneID:679825"
                     /db_xref="RGD:1583663"
     CDS             1..1203
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /note="Rae-1-like protein"
                     /codon_start=1
                     /product="retinoic acid early transcript 1L like 1"
                     /protein_id="NP_001155163.1"
                     /db_xref="GeneID:679825"
                     /db_xref="RGD:1583663"
                     /translation="MEGGVQAPSLTGRPSRVAVILTEGQASYKVPDNCWSYSVGDRHF
                     RESLSGILCGAAQNPHGFSQLRSHLLLRAGMAENTAAEHPLFTGASCVLVFLSCLGST
                     LCADVHSLSCNLIIRSPTKAEPLWYEGQCSMDGNVFLSSNNVNKTMPLGNQEKMANAT
                     EVWTCLTQWIDRCKQDLRDKVSEIKGDTTKTSGHPTLRVTMLSNHSHEQIIGASCVFN
                     ISENYSFILDLKTMKWKLINPVPEDIMKEWKDDKTLMKHLNLFIVECSPKFNEFLNQH
                     EERTRSTTRAPDITQPPPTSQVPYKEVLIPVGLIISIIFIIFLCICVKRMCCPHGGRE
                     LQLLKDYCINWHKPQRNEGLEETKGEVPNQRTKMLSQEEDPKTLGGPRRASESVELEL
                     QMFSSTGS"
     exon            1..316
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
     exon            317..577
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
     exon            578..841
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
     exon            842..994
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
     exon            995..1136
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
     exon            1137..1203
                     /gene="Raet1ll1"
                     /gene_synonym="Rrlt"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 atggagggtg gagttcaggc tcccagtttg accggacggc cttcccgcgt ggctgtgatc
       61 ctcacggagg gacaagcaag ctacaaagtt cctgacaatt gctggagtta cagcgttggt
      121 gaccggcatt ttcgtgaatc tctgagcggg atcctctgcg gggcggcaca gaatcctcac
      181 ggcttctcac agctcaggtc acacctgttg ctcagggcgg gtatggcaga gaatacagcc
      241 gctgagcatc ctctattcac aggagcttca tgcgttttgg tttttctgag ctgtctgggg
      301 tctacgctgt gcgctgatgt acactctctt agttgcaact tgatcatcag gtctcctacc
      361 aaagcagaac ctctctggta tgaaggacag tgttcaatgg atggaaatgt tttcctttct
      421 tctaataacg tgaacaagac catgcctttg ggtaaccagg agaagatggc aaatgccacc
      481 gaagtgtgga catgtttgac ccagtggata gaccgatgta aacaggactt aagggacaag
      541 gtgtctgaaa tcaaagggga cactaccaag accagtggtc accccacttt acgggtcacc
      601 atgctttcta accacagcca tgaacaaatc attggtgctt cctgtgtatt caacatcagt
      661 gagaattatt ccttcatctt ggacctaaag actatgaagt ggaaactgat taatcctgta
      721 ccagaggaca tcatgaaaga atggaaagat gataagacat taatgaaaca tctgaatttg
      781 ttcatagtag aatgcagtcc gaaattcaat gaattcttaa atcagcacga ggaaagaaca
      841 agatcaacaa caagggcccc agatatcacc cagcctccac ctaccagcca ggttccttat
      901 aaggaagtat tgatccctgt aggactcatc atttccatca tctttattat tttcctttgc
      961 atatgtgtga agaggatgtg ttgtccccac ggaggtagag aacttcagct gctcaaggac
     1021 tactgcatca actggcacaa gccacagagg aatgaggggc tagaggagac aaaaggagag
     1081 gttcccaacc agagaaccaa aatgttgtcc caggaggaag atcccaagac attgggaggc
     1141 ccaaggaggg catcagaatc tgtggaactg gagttacaga tgttttcaag tactgggagc
     1201 tga
//
