LOCUS       XM_039089638            1230 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAD9 checkpoint clamp component B
            (Rad9b), transcript variant X10, mRNA.
ACCESSION   XM_039089638
VERSION     XM_039089638.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1230
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1230
                     /gene="Rad9b"
                     /note="RAD9 checkpoint clamp component B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 17 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:363924"
                     /db_xref="RGD:1308223"
     CDS             92..844
                     /gene="Rad9b"
                     /codon_start=1
                     /product="cell cycle checkpoint control protein RAD9B
                     isoform X5"
                     /protein_id="XP_038945566.1"
                     /db_xref="GeneID:363924"
                     /db_xref="RGD:1308223"
                     /translation="MIKPRLLAEAIALLTSNQEEVTFSVTPENFCLKSSSGESLDLTS
                     SVYSEMSFGPEEFDFFQVGLDTEITFCFKELKGILTFSEVMHAPIAIYFDFPGKPVVL
                     SVEDMLLEASFILATLLDYPSRTSSPQSLRLSQARRSDPTLSGAQEGKSRVSQTPESI
                     SRAAPKRLFPKDPPDSSSAAETRRASASQDDISEVPESVVSDMEEGQSPSPLRKFSCM
                     FFGAVSCEQQEHANHPLGSLAVASDSEQDASG"
ORIGIN      
        1 gcatggtatt aaaagaactc acaatgtgta tttccaagac tgccagccct tgaaaattct
       61 ctttgaaaag agcttgtgtg cgaacatcct gatgattaaa ccaagactgc tggctgaggc
      121 cattgctctt ctaacatcga atcaagagga agtcaccttc tccgttaccc cagagaattt
      181 ctgcctcaag agctcgagtg gggaatcact ggatttaacc agctctgtgt acagtgagat
      241 gtcttttggc ccggaagagt ttgacttctt tcaggttgga cttgataccg agataacctt
      301 ttgctttaaa gaactgaagg ggatcctcac cttctcagaa gtgatgcacg cacccattgc
      361 catctacttt gactttcctg gaaaaccagt tgttctgagt gtggaagaca tgctcttgga
      421 ggcgagcttt atcctggcca ccttattgga ctatccaagt agaacatctt caccacagtc
      481 actgcgcctt tcccaggcac gaaggtcaga ccccacactg tccggtgctc aggagggtaa
      541 aagccgagtc agccagaccc cagagagcat ctctcgagca gcgcccaaaa ggctgtttcc
      601 caaggatcct cctgacagca gctctgcagc agagaccagg agagccagcg ccagccagga
      661 tgacatctcc gaggtgcctg agagtgttgt cagtgatatg gaggaagggc aaagtccctc
      721 acccctcaga aagttttcct gcatgttctt tggagcagta tcttgtgaac agcaagagca
      781 tgccaaccac cccttgggca gtctggcagt agcaagcgac agtgaacagg acgcgagtgg
      841 atgaacgtcc acgctaaggc tgtaatagcc acaccgggcg cttggctccc tgaaggccaa
      901 ggggaaactg agcaaactgt cccaggatgc cctggagaca gtgtctctgc tcttgccagg
      961 atcactgtgc actaaaatct gtgtcacttg ggggacagag ctggccgcac aaggatgagc
     1021 catcggggtt agatgccact gtttaaccct gcagccttgg catgtcccct gtggatccct
     1081 aaggcagact tccctcagca tctgggtgag gtggagcttc tgtacctgac agcagccttc
     1141 cagcttatgt gagacctgac aggctttgtt cagtgttgtt tttcagagta gagaaaaggt
     1201 ggtgaataaa agacatacag ttaacttcac
//
