LOCUS       XM_039107435            2931 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAD52 homolog, DNA repair protein
            (Rad52), transcript variant X10, mRNA.
ACCESSION   XM_039107435
VERSION     XM_039107435.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2931
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2931
                     /gene="Rad52"
                     /note="RAD52 homolog, DNA repair protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 ESTs, 8 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 18 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:297561"
                     /db_xref="RGD:1304975"
     CDS             161..1123
                     /gene="Rad52"
                     /codon_start=1
                     /product="DNA repair protein RAD52 homolog isoform X9"
                     /protein_id="XP_038963363.1"
                     /db_xref="GeneID:297561"
                     /db_xref="RGD:1304975"
                     /translation="MAGAEEAVHGGCDCRPPFVGGKSVLLFGQSQYTADEYQAIQKAL
                     RQRLGPEYISSRMAGGGQKVCYIEGHRVINLANEMFGYNGWAHSVTQQNVDFVDLNNG
                     KFYVGVCAFVRVQLKDGSYHEDVGYGVSEGLRSKALSLEKARKEAVTDGLKRALRSFG
                     NALGNCILDKDYLKSLNRLPRQLPLEVDLTTTKREDFEPSVEQARYNSCRQDKASGLP
                     KPQEAASPCRPSHPHDSNIKLQGAKDSSSSSCSLATTSESDATHQRKLRKLRQKQLQQ
                     QFREQMEAHRLSHAPAEEVEAKREENSESHRKSQDLKKRKLDPS"
ORIGIN      
        1 cttcggactt gacttacggc tcctcttctg ttattctttg ggctcagacc ttcttcccag
       61 cgttccctga gcttgcgcct cgatctcttc tgcgaggccc tctccagcct cccagcaccc
      121 aggaccgagc tcctgcgtgc accgcgttcc gagagtcaat atggctgggg ctgaagaagc
      181 ggtccatgga ggctgtgact gccgtcctcc gtttgttggt gggaagtctg tgcttctctt
      241 tggacagagc caatacacag cagatgaata ccaggccatc cagaaagccc tgaggcagag
      301 gctggggcca gagtacatta gcagccgcat ggcgggagga ggtcagaagg tgtgttatat
      361 tgaaggtcac cgggtaatta atctggccaa tgagatgttt ggttacaatg gctgggcaca
      421 ctccgtcacc cagcagaatg tggattttgt tgacctcaac aatggcaagt tctacgtggg
      481 agtctgtgca tttgtaaggg tgcagttaaa ggatggttcc taccatgagg atgtgggcta
      541 tggagttagt gagggcctca gatcgaaggc tttgtcactg gagaaggcca ggaaggaggc
      601 tgtgactgac gggctgaaac gggcactcag gagttttggg aatgcacttg gaaactgcat
      661 tctggataaa gactatctga agtcgctgaa taggctgcct cggcagctcc cacttgaagt
      721 ggatttaact acaacaaaga gagaagattt tgaaccatct gtagaacagg caagatataa
      781 cagctgccga caggataaag catcggggct ccccaaacca caggaagcag cttctccttg
      841 cagaccaagc cacccacatg attcgaacat taagctacag ggggctaagg acagcagcag
      901 cagctcctgc agtctggcca ccacctcaga gagtgatgcc actcaccaga ggaagctccg
      961 gaagctccgg cagaagcagt tacagcagca gttccgggaa cagatggagg ctcaccggct
     1021 tagccacgca cctgccgaag aggtggaagc caagcgtgag gaaaactctg aatctcatag
     1081 gaagagccag gacctgaaga aaaggaaact agatccatcc tgaagctcaa taagttacta
     1141 gattctgcca caaaaggact ttggaaaatg cagtttggtc accaaattat tcccatcttg
     1201 gttcatgctg aactctttag agcctactgt agaggaagct gactacaaga ggttgttgta
     1261 ccctgtgatg ggaaagaggc caacagatgc tttaactttt ttcagtattg cttactccta
     1321 agccaatgca ttgagattct aggaaggctg ccttccgttt taacgatgta gctcaccaaa
     1381 cccagtttca ttgccaccta cattaaatca cgtgtgacct tgcctttcct ttggcttcag
     1441 gtttttaatg ttttccactg ggtgctatca acaaggtcac ggttagttca ggactatgca
     1501 tggatccaca gagtagcctc cctttatcta gagatgtgcc aacacttaaa tggggcactt
     1561 aagacttccg tcctctccat ggcatttctt ttagtgtttt tgttttttgt gtagtcctgg
     1621 ccgtcctggg tcttgcacct gccccctccc tccctccctt cagagtgctg ggattaaagg
     1681 agtggctcct gtcagtgctg tgttttgagc tagtaatgtt tgaacgctaa tactggaaga
     1741 attggtgtga cttataactg agattactgg tcgttagact tcttgcatgg ctgtatttgg
     1801 caaaggcgta attcacatcc agggtaagat tcatgaacaa cgcacaattt taaagaattg
     1861 ttttctctgg ctgaaacctg aatgaaaaac catgggttgt cggggagcta ctgcataact
     1921 tctcatttaa aggaaggaat catagtgcat aaggttgctg ggacttgaac tcagacattt
     1981 caagagcagt cagtgctctt aactgttgaa ccccaggaat aggttttttt tttctttttt
     2041 ttcggagctg gggaccgaac ccagggcctt gcgcttccta ggcaagtgct ctaccactga
     2101 gctaaatccc caacccccag gaataggtgt tttaaagaag taactactct cttgactatg
     2161 tcatacccag aagttcccat gattcttttc aaaggaataa ggaacttcca agtctacgta
     2221 gctgcattta gggttatgct atgcctaaaa caggaggaaa ttggtgctct cttcacacca
     2281 tgtgggtcct tgtggtcaag cacaggcttt gtgggaagta cctttagccc ctgttctcaa
     2341 tctcgaagca ggaacaagat ttatttgtgg gaaactgagt caaatgctta cagaactgtt
     2401 gactgacagc cgtttgccat aatttccctg cctcctaaca gctgctttgc cttttttttc
     2461 ctgaggggaa agtaccactt tcatccttgc aactgctact aaaggttccc agaaacaata
     2521 aatccagcta taaactgaca catctgtgtg ttggtagtct ggcaggttgg aaaaggagag
     2581 actcacctca taattcatgt gtcctttgct gcctctcctg cctgaaaaag tttttttgtt
     2641 ggtttgttag aaaggacacc ccagagttca acaaaagcaa gtttggttta tttgaatggt
     2701 ttcattaaat aagttctaca aaggtaacaa actgaagcac gaagcgcaat cttacaagaa
     2761 gcgcaacacc cggagttagt gcaaaatgta cagttaacgg ctgctgagaa accccaaggt
     2821 ttgaattcag ttttaaacag tgtacattgt taaataacgt aaggaaaaca tttataattc
     2881 ggaaagttct ttttaaatgt ggaaaaagat actcaaagtg tactattaac a
//
