LOCUS       NM_001399054            3517 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus RAD51 associated protein 2 (Rad51ap2), mRNA.
ACCESSION   NM_001399054 XM_006239899
VERSION     NM_001399054.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3517)
  AUTHORS   Kovalenko,O.V., Wiese,C. and Schild,D.
  TITLE     RAD51AP2, a novel vertebrate- and meiotic-specific protein, shares
            a conserved RAD51-interacting C-terminal domain with RAD51AP1/PIR51
  JOURNAL   Nucleic Acids Res 34 (18), 5081-5092 (2006)
   PUBMED   16990250
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            On Dec 30, 2021 this sequence version replaced XM_006239899.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR22582416.1092376.1,
                                           SRR26360181.3365238.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3076              JAXUCZ010000006.1  39901251-39904326
            3077-3151           JAXUCZ010000006.1  39904886-39904960
            3152-3517           JAXUCZ010000006.1  39907838-39908203
FEATURES             Location/Qualifiers
     source          1..3517
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q15"
     gene            1..3517
                     /gene="Rad51ap2"
                     /note="RAD51 associated protein 2"
                     /db_xref="GeneID:100360197"
                     /db_xref="RGD:2322652"
     exon            1..3076
                     /gene="Rad51ap2"
                     /inference="alignment:Splign:2.1.0"
     CDS             25..3270
                     /gene="Rad51ap2"
                     /codon_start=1
                     /product="RAD51-associated protein 2"
                     /protein_id="NP_001385983.1"
                     /db_xref="GeneID:100360197"
                     /db_xref="RGD:2322652"
                     /translation="MSLSRPAWPSGPAWPLSSEPPPQDPAAASPSSKRRRLKEPDGVC
                     EAGWPLLVVPRLSEVEKVWEWSPRPFTAFLIPKSPGSSGGGRQRCDPGCGDTTFQTQN
                     CWQSGISGRAVCSRAPGRSCEAGLKDGEGVYLGDQAEVSHAPPNTLMPHVQGVKQESE
                     ELPEKETILKEKNSVARQPRNPFLDVTFSEETKSALHEIKDRCKVDSVITSEKRENVS
                     SSTLKIPKIQNQACLESAKPSYFRDSITKNFPEFPRDLNSNMSFVYLKEVAKKKNDKI
                     VAYVRDFTNIFLSQNRPDAKKQKLQDKKYVHVENDFSDYSESNHQSLTIEGKIDLINL
                     NYYRHGSIECDVRDSKKNITLTLENANLEGAERNQDYYIPTRQKESQSPNYNKSILKR
                     KQQNWRMKKFRIIYENMNKHGEHLNLALCGDLLHKADYHSVKVRNVMIGTLGSPPNLI
                     KVVWFNGKGENINMLQLRYYTLQKYISGNKEDSTLICHEMSTCEKQIDTQKSGVLSKY
                     LQNSISEFLNMILKTNTVSLLDNFDSFIRNAGDGESEEGCIFKYIVNLNYLKNIIQER
                     HIVYLTKMLTSSRLLEHNTKSTVKKRKLFKMEHVLEWAKKQNINSLTMTTKKFPVYKV
                     CENVPLLMNFDSTEELSLTKQPSYENTNCAEQLLNMGDLAYYMFGISNSHVKSDLLFI
                     QNNCGHINEKYYESSMCSQDLDTERKWKHKAIHLIFKFIFEDVFNVRQLCMLLSQNTS
                     HSDQINAMAITLKINLEDLLSKIEGKIYDFVLKKEMKVTKSSSSCQVHKAIDTKKQES
                     SFLPMDRMSSVQSASLVSKSINMEETKSVNQNNGTSAKEDGGILQEIELTNSKHFHPE
                     NESALYANHQFESDSSGENNECFQGLTAKCLSTETLPIANEFEIKSKFDLVLEELRMF
                     HEISKENEIPSTMETHNREENYFGESNDVKEARMEIGNKLEMVETSTRDTSLLPCDVK
                     AGLNKHKRHQSLFNWKVIPTHGGQAVPNESCPGSEEELFHSTPEEDYKKPLPKSSTFS
                     PDEYKKETLLKGGSHVSHGISRVQPLKTCSRPIRVGLSRRARLKQLHPYLK"
     exon            3077..3151
                     /gene="Rad51ap2"
                     /inference="alignment:Splign:2.1.0"
     exon            3152..3517
                     /gene="Rad51ap2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gacagatatt tctggtgggc gcccatgtct ctctcccgcc ccgcgtggcc ttcagggcct
       61 gcctggccgc tctcctcaga accgcctcct caggaccccg ctgcggcgtc acccagcagc
      121 aagcggcgtc gtctgaagga gcctgacggc gtctgtgagg cgggatggcc actgcttgtg
      181 gtgcctcgct tgtctgaggt agaaaaagtc tgggagtggt cgcccagacc cttcacagcg
      241 ttcctcattc caaagagccc cgggagctca ggcggtggga ggcagcggtg tgacccggga
      301 tgtggagaca caacattcca gacacagaac tgttggcagt ctggaatctc aggaagagca
      361 gtttgttcga gggctccagg aaggtcttgt gaagcaggac tgaaggacgg ggagggtgtg
      421 taccttggtg accaagcaga agtgagtcat gctccaccca ataccctcat gccccatgtc
      481 caaggagtta aacaggagtc tgaagaactt cctgagaagg aaactattct gaaagaaaag
      541 aattctgtgg cgagacagcc aagaaaccca tttctggatg taacgttttc tgaggaaact
      601 aagtcagcat tacatgaaat taaggacaga tgtaaagttg acagtgttat aacctcagag
      661 aaaagagaaa acgtttcatc atctacacta aaaataccaa aaattcaaaa ccaggcctgc
      721 ttggaaagtg ccaaacccag ctattttaga gatagcatca caaaaaattt ccctgagttt
      781 ccaagggatt taaatagcaa catgtccttt gtctatttaa aggaagtagc aaagaaaaag
      841 aatgacaaaa ttgtggcata tgttagggat ttcacaaaca ttttcttgtc ccaaaataga
      901 cctgatgcta agaaacaaaa gttacaggat aaaaaatacg tacatgtgga aaatgatttt
      961 tctgactatt ctgaaagtaa ccaccagtca ctcacaattg aagggaaaat agacttgatc
     1021 aatttaaact actatcggca tggtagtatc gagtgtgatg taagagactc taaaaagaac
     1081 atcactctca cactagaaaa tgcaaatttg gagggagcag aaaggaatca agactattac
     1141 atacctacca gacaaaaaga atctcaaagc ccaaactata acaaatctat tttgaaaaga
     1201 aaacagcaaa attggagaat gaaaaaattt aggattattt atgagaatat gaataaacac
     1261 ggagaacatt tgaatttggc gttatgcgga gaccttttac acaaggcaga ttatcacagt
     1321 gtgaaagtca ggaatgtaat gataggaact ctgggttctc cccccaattt aataaaggtt
     1381 gtttggttta atggtaaagg cgaaaatatc aatatgctac agctgagata ctatactcta
     1441 caaaagtaca tttcaggaaa taaagaagat agtactttaa tctgccatga aatgtcaaca
     1501 tgtgaaaagc agatcgatac tcaaaagagt ggcgttttga gcaaatattt acaaaatagt
     1561 atttcagaat tcttaaatat gattctgaaa accaatacag tttctttgct cgataacttt
     1621 gattctttca taagaaatgc aggtgacggg gaatcagaag agggttgtat tttcaaatat
     1681 atagtgaatt tgaattattt gaaaaatata atacaggaaa gacatattgt gtatctaaca
     1741 aagatgttga cttcttcaag gctattagaa cataatacaa aatctacagt taagaaaagg
     1801 aagctattta aaatggaaca tgttcttgaa tgggctaaga aacaaaacat caattctctt
     1861 actatgacaa ctaaaaagtt tccagtttac aaagtatgtg aaaatgttcc ccttttaatg
     1921 aattttgata gcacagaaga actttctctg acaaaacaac ctagttatga gaatacaaat
     1981 tgtgctgaac aactcctaaa tatgggagat ttggcttatt atatgtttgg tattagcaac
     2041 tcacatgtga agtctgatct tttatttata cagaataact gtggacatat taatgaaaaa
     2101 tattatgaaa gtagtatgtg tagtcaagat ttagatactg aaagaaaatg gaagcataag
     2161 gccattcact taatttttaa gttcatattt gaagatgtct ttaatgttag acaactgtgc
     2221 atgttgttaa gccaaaatac atcacacagt gaccagatta atgcaatggc cataactctg
     2281 aagatcaact tggaggattt gttaagtaaa atagaaggga aaatatatga ttttgttttg
     2341 aagaaagaaa tgaaggtcac aaaaagttca agtagttgcc aagttcataa agctattgac
     2401 acaaagaagc aagagagtag ttttctccca atggacagaa tgtcttcagt gcagtcagct
     2461 tcgctagtga gtaagagcat aaatatggaa gaaactaaat ctgttaatca aaataatggg
     2521 actagcgcaa aagaggatgg aggtattttg caagaaattg agctaactaa ttcaaagcat
     2581 ttccatccag agaatgagtc tgcattgtat gctaatcatc agtttgaaag tgattcaagt
     2641 ggggagaaca atgaatgttt tcagggctta actgctaaat gtttatcaac agaaactctg
     2701 ccaatagcaa acgagtttga gataaagagc aagtttgatt tagtacttga agaacttcgt
     2761 atgtttcatg aaattagtaa ggaaaatgaa attccaagta ccatggaaac acacaatagg
     2821 gaagaaaatt actttggaga aagtaatgat gttaaggagg caagaatgga gataggaaac
     2881 aaactggaaa tggttgaaac cagcacaaga gatacatctt tattgccttg tgatgtgaaa
     2941 gcaggcctca acaaacataa aaggcaccaa agtttattta attggaaagt aatacctact
     3001 catggcggac aggcagttcc caatgagtct tgtccaggat cagaggaaga attattccat
     3061 tctactcctg aggaagatta taagaaacct ttacctaaaa gctctacttt ttctcctgat
     3121 gaatataaaa aagaaacttt actgaaggga ggcagtcatg tctcgcatgg gatttccaga
     3181 gtacagcctc ttaaaacatg cagccgtccc attagggttg gcttgtcaag aagagctagg
     3241 ctgaaacagc ttcatcctta tctgaaatga atgagttata aggacttaca agaagcttct
     3301 ggactataac agttcagcat atctaggaat gctttatatt ttgctttgta taagtgtttt
     3361 cctttagctt gcaaaatttg cgctttttta aaaaataaag tacagagagg ttcttttgtg
     3421 tataaattat ttaattgact ttaaaagaaa acttttcact gatatttcat gtcatatgat
     3481 caatatacac attaaagtat tttcatgatc acttaaa
//
