LOCUS       XM_001072159            2891 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAD21 cohesin complex component like 1
            (Rad21l1), mRNA.
ACCESSION   XM_001072159
VERSION     XM_001072159.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001072159.6.
            
            On Jan 21, 2021 this sequence version replaced XM_001072159.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2891
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2891
                     /gene="Rad21l1"
                     /note="RAD21 cohesin complex component like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:689823"
                     /db_xref="RGD:1587557"
     CDS             182..1840
                     /gene="Rad21l1"
                     /codon_start=1
                     /product="double-strand-break repair protein rad21-like
                     protein 1"
                     /protein_id="XP_001072159.4"
                     /db_xref="GeneID:689823"
                     /db_xref="RGD:1587557"
                     /translation="MFYTHVLMSKRGPLAKIWLAAHWEKKLTKAHVFECNLEITIQKI
                     ISPKVKIALRTSGHLLLGVVRIYNRKAKYLLADCSEAFLKMKMTFRPGLVDLPKENFE
                     AAYNTITLPEEFHDFDIYNTNDIDISEPLAQNQSRPEEITLREEYSTDLLFQTGSFGD
                     EPELLRRHSFFDDNILMNSSGLVVEHSSGSLTEEKSLFFDNGDGFGDEGAAGEMIDHL
                     LQDENTFFEDTYLNKEVFLPPEVPSSVMVEPGNSDDHYIPEDEKINEITLISNEEEGF
                     TLDPIDGLDIADRRKRKKRRLLIDPVKEISSKTMHKQLTSFMDTLMVLDLAPPTQRLM
                     MWKKRGGVETLLSTATQDLINEDLKMLFANCFLSSDYKLAKLTLKESLRKEVGNQHIL
                     DPSVVEEPNSHSELGQPQDGKDVTDESMGSFQENINRNINSKQDILEMISPAAEGFSL
                     VSASSAQENHPAELESSGSKQNTEAEKWNQRLFQTLNELREFNKMGMQFFSLIKLCRN
                     SDRKQAAAKFYTLLILKKHRAIELSQSAPYADVIATVGPMFHKL"
ORIGIN      
        1 gtgctggttc cctctcacag cccacagccc gcagccagca gcttcaggag acttgcgtct
       61 gggaccctca cacgcgcgtg gcttcacaac tcgtggactc cacactgaaa gcagggtgct
      121 gtgcggtctg cccgcgaggc caggaagtgt tccttaaata caactaagga atacaggcaa
      181 catgttctac actcatgtgc ttatgagtaa acgagggcca ctggccaaaa tatggcttgc
      241 agctcactgg gagaagaagc tcacaaaggc ccatgtgttt gagtgtaatc tagagataac
      301 tattcaaaaa attatttcac ctaaggtgaa aattgcactc cgaacttcag gacaccttct
      361 tctgggagtc gttcgaatct acaacaggaa ggcaaaatac cttttagcag attgcagtga
      421 agcgtttctt aaaatgaaga tgacatttcg cccaggactg gttgacctcc ccaaagagaa
      481 ttttgaagca gcttacaaca ctatcacatt accagaagaa tttcatgatt ttgacatcta
      541 caatacaaat gatattgata tttcagagcc ccttgctcag aaccaaagta gaccagagga
      601 aatcacactt agagaagaat atagcactga tctacttttc caaacgggga gctttgggga
      661 tgaacctgaa ctcctcagaa gacatagctt ctttgatgac aacatattga tgaactccag
      721 tggtcttgta gttgagcata gttctggaag cctcactgag gaaaaatctt tgttctttga
      781 caatggagat ggatttggag acgaaggggc tgcaggagaa atgattgacc atctattgca
      841 agatgagaat acctttttcg aagacacata cttgaacaaa gaagtttttc tgcctcctga
      901 ggttcccagt agtgtgatgg tagaaccagg taattcagat gaccactata tacctgaaga
      961 tgaaaaaata aatgaaataa cattaatatc aaatgaagaa gaaggattta ctcttgaccc
     1021 aattgatggt ttagatattg ctgatagaag gaaaaggaag aagagaaggt tgctcatcga
     1081 tcccgtcaag gagataagca gcaagactat gcataagcag cttacttcct tcatggacac
     1141 tctcatggtt ctggacctcg cgccccccac gcagagactc atgatgtgga agaagagggg
     1201 aggagtggag acgcttctgt caactgctac ccaggattta atcaatgaag acttgaaaat
     1261 gttgttcgca aattgcttcc tgtcctcgga ctataaactt gcaaagttga cactgaagga
     1321 gtcattaagg aaagaagtgg gaaaccagca cattctagat ccctcagtgg tcgaagagcc
     1381 aaactcccac agtgagttag gtcaacccca agatgggaag gatgtgactg acgaatctat
     1441 gggtagcttt caggagaaca tcaacaggaa tattaactct aagcaggaca tcctcgaaat
     1501 gatttctcca gctgctgaag gcttttcttt ggtgagtgcc tcctcggccc aagaaaatca
     1561 tccagctgaa ttggagtcat caggcagcaa gcaaaatact gaggcagaaa aatggaacca
     1621 aagattattt caaacattaa atgagttacg ggaattcaac aagatgggaa tgcagttctt
     1681 tagtttgata aaactatgca gaaacagtga ccggaaacag gcagctgcca aattttatac
     1741 tcttctcatc ctgaagaagc atcgggcaat cgagctgagc cagagcgctc cctatgcaga
     1801 tgttatagct acagtgggac caatgttcca taagctatga aagagtccac agcacgcagg
     1861 ttcacaccgt cgctcgcact tctgcataga ctcttcagtt tgatgcagaa gccatctgga
     1921 agcagctgat ggccatccat ttcatagaca ggctggcctc cctttttcta tctggaggtc
     1981 agaaccaaca cagccagagt tggaagccta tgtggagaca ggtatttttt tttaacctag
     2041 ctgatttgaa tgtctgtcat ttattattgc cctgatctga atgttgcatt taggttgtgt
     2101 gtaggataca ttataaaata cctccaggaa acattcaagg ctatttctaa aacactgctt
     2161 tacgttgggt tactaaagtt tgtggggcta atgaatggtt gatattgtct tacttgtaga
     2221 tattagttta tttgagctac tttgtatcac tgatagtgcc taattccctg ggttttaatc
     2281 taatacccaa ttataaagag cctctttgaa tatatacata tatatttaac tataagatgc
     2341 aaatagcaga attattttaa atatttttat ttttaaatta ataaaaatgt ttttttgatt
     2401 tttggtatac agattaatat atatattaaa cacacatatc ataatctata catagtcata
     2461 tcatctttta agaaattatt ttggtttatc accttgtgga agttcccctg ttctatagct
     2521 agcttctatt ctccatgact atacttttgt ctagttggga atgttatata aatggaatta
     2581 tatagcatat aaccttctga aactggtttc tttgactcag ttgcatttct tcatatgcaa
     2641 ccaagttctt tcatatgtcg gtattttgct cctatcaaag gctgatagta ttctgttgcc
     2701 tgattttatc cattaaaaga ctttaaatat ttccaatttt attattacag agatgcaagc
     2761 atatgtagtt ttatacatat aagtgtttat ttctgtaaga atagcatttc tgagtcatat
     2821 ataaatgtat atttaacttt ataacaaatt atttgccaga ggttatacca ctttgcattt
     2881 aataaaatat a
//
