LOCUS       XM_006242228            1836 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB, member of RAS oncogene family
            like 2 (Rabl2), transcript variant X3, mRNA.
ACCESSION   XM_006242228
VERSION     XM_006242228.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006242228.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1836
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1836
                     /gene="Rabl2"
                     /gene_synonym="Rabl2a; Rabl2b"
                     /note="RAB, member of RAS oncogene family like 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 4 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 44 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362987"
                     /db_xref="RGD:1306749"
     CDS             369..1040
                     /gene="Rabl2"
                     /gene_synonym="Rabl2a; Rabl2b"
                     /codon_start=1
                     /product="rab-like protein 2B isoform X2"
                     /protein_id="XP_006242290.1"
                     /db_xref="GeneID:362987"
                     /db_xref="RGD:1306749"
                     /translation="MAGDRSKQGELDQEKYDAHENVKIICLGDSAVGKSKLMERFLMD
                     GFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFD
                     VQRKITYKNLGTWYAELREFRPEIPCILVANKIDADIQMTQKNFSFAKKFSLPLYFVS
                     AADGTNVVKLFNDAIRLAVAYKKSSQDFMDEVLQELENFKLEQKEEDTPDQEQGDMSK
                     SPSPS"
ORIGIN      
        1 ggttttggct ttcgaacgga ccactccctg tacaggctgt agtgtaattg cagcccagcg
       61 ggcgaagaat ctggattatt gtacattcga agcagtgttc gccgagtcgt atttgggaat
      121 ggagcgagtg gagcgggcta gagatgatgt tacgcaccgg tgttcacatc gggtagtagt
      181 catgtcttaa acttgtggag atatgagaag tatgagtgtg cactgaacta acgcactgtt
      241 tatgattaac gcgtaacatt gctatatgcc ctcgtctcct atttaaaaaa ccgatgagca
      301 gttaaacatc tgagtttaca aacggtgaca agactccaag gctgacactt gtccacggac
      361 acgagctaat ggcaggggac agaagcaagc agggtgagct ggaccaagag aagtacgatg
      421 ctcatgaaaa cgtgaagatc atctgcctgg gggacagtgc agtgggcaag tccaaactca
      481 tggagaggtt tctcatggat ggattccagc cacagcaact gtccacatat gctctgaccc
      541 tgtataaaca cacggccaca gtagacggca agaccatcct tgtggacttc tgggatacag
      601 caggccagga gcggttccag agcatgcatg cctcctacta ccacaaggct cacgcctgca
      661 tcatggtatt tgatgtccag aggaaaatca cctataagaa cctgggcacc tggtatgcag
      721 aacttcggga gttcaggccg gagatcccgt gcatcctggt ggccaataaa attgatgcag
      781 acatacagat gactcaaaag aatttcagtt ttgccaagaa gttctcccta cccctgtact
      841 ttgtctcggc tgctgatgga accaatgttg tgaagctctt caatgatgct attcggttag
      901 ctgtggctta caaaaaaagt tcccaggact tcatggatga ggttttacag gagcttgaga
      961 acttcaagtt ggagcagaaa gaagaggata caccagacca agagcagggt gacatgagca
     1021 agagcccatc tccttcttaa ccagaggaca tccacacatg gcagaattgg ggtattgggg
     1081 accatttgga acaccctaca ttgctggaga acctctctag actacccctg ctcaacttcc
     1141 tgcaaaccca ctgttctgtg gtacttgatg aggtcaacac aaactagaca gatgtgatac
     1201 ccaccagctt cctgcatcag gatgagggat ccgtgtcttt cacatccccc acccccaccc
     1261 cagcagcctg acagtgcaga aacagtgcac atgctcatgt cttcttagta gacatttagg
     1321 tgtttgttgg tctttcttcc caaactgacc tcagggactg tcacttcctt tttgccgaga
     1381 gaatgatgca aaaggactgt gtccctacag aatccatcca tgatacccct gtccctgtct
     1441 cccaaccaac tttctcaaca atattttgac agacaactgt taattccaga tttgttttta
     1501 gcaccgactg tttcaggagc tcttctaggt cagttgagag cacaggagca gaactattgc
     1561 ggtggagtga agacaagtct agccatatct gcttacacac actttactgt tccccaccac
     1621 atgaacaaaa acccccttta aacctccatc tcagggtaga aagcttcctc cacctctggg
     1681 gcgagccaca cactgcgtcg tggtcagggt agcagtgagg agcagaggag agccgcctgc
     1741 gctctgcagc ttgctggatt gccttgtctc gagcatttgc attatcattt tgtttatatt
     1801 gtttcctttt ttacaataaa gagtacgttt cataaa
//
