LOCUS       XM_006242227            1645 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB, member of RAS oncogene family
            like 2 (Rabl2), transcript variant X2, mRNA.
ACCESSION   XM_006242227
VERSION     XM_006242227.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006242227.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006242227.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1645
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1645
                     /gene="Rabl2"
                     /gene_synonym="Rabl2a; Rabl2b"
                     /note="RAB, member of RAS oncogene family like 2; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 16 ESTs, 8 long SRA reads, 7 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 144 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:362987"
                     /db_xref="RGD:1306749"
     CDS             178..849
                     /gene="Rabl2"
                     /gene_synonym="Rabl2a; Rabl2b"
                     /codon_start=1
                     /product="rab-like protein 2B isoform X2"
                     /protein_id="XP_006242289.1"
                     /db_xref="GeneID:362987"
                     /db_xref="RGD:1306749"
                     /translation="MAGDRSKQGELDQEKYDAHENVKIICLGDSAVGKSKLMERFLMD
                     GFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFD
                     VQRKITYKNLGTWYAELREFRPEIPCILVANKIDADIQMTQKNFSFAKKFSLPLYFVS
                     AADGTNVVKLFNDAIRLAVAYKKSSQDFMDEVLQELENFKLEQKEEDTPDQEQGDMSK
                     SPSPS"
ORIGIN      
        1 tggccagccc gcgcaccact ggggtccttc aggccattgc tggacagccc agctcggggt
       61 cctggtgcgg tcgcgtagca gcggcagaga cgcggccgag ccgctaccgg actacggtca
      121 cctgtaagcg acggtgacaa gactccaagg ctgacacttg tccacggaca cgagctaatg
      181 gcaggggaca gaagcaagca gggtgagctg gaccaagaga agtacgatgc tcatgaaaac
      241 gtgaagatca tctgcctggg ggacagtgca gtgggcaagt ccaaactcat ggagaggttt
      301 ctcatggatg gattccagcc acagcaactg tccacatatg ctctgaccct gtataaacac
      361 acggccacag tagacggcaa gaccatcctt gtggacttct gggatacagc aggccaggag
      421 cggttccaga gcatgcatgc ctcctactac cacaaggctc acgcctgcat catggtattt
      481 gatgtccaga ggaaaatcac ctataagaac ctgggcacct ggtatgcaga acttcgggag
      541 ttcaggccgg agatcccgtg catcctggtg gccaataaaa ttgatgcaga catacagatg
      601 actcaaaaga atttcagttt tgccaagaag ttctccctac ccctgtactt tgtctcggct
      661 gctgatggaa ccaatgttgt gaagctcttc aatgatgcta ttcggttagc tgtggcttac
      721 aaaaaaagtt cccaggactt catggatgag gttttacagg agcttgagaa cttcaagttg
      781 gagcagaaag aagaggatac accagaccaa gagcagggtg acatgagcaa gagcccatct
      841 ccttcttaac cagaggacat ccacacatgg cagaattggg gtattgggga ccatttggaa
      901 caccctacat tgctggagaa cctctctaga ctacccctgc tcaacttcct gcaaacccac
      961 tgttctgtgg tacttgatga ggtcaacaca aactagacag atgtgatacc caccagcttc
     1021 ctgcatcagg atgagggatc cgtgtctttc acatccccca cccccacccc agcagcctga
     1081 cagtgcagaa acagtgcaca tgctcatgtc ttcttagtag acatttaggt gtttgttggt
     1141 ctttcttccc aaactgacct cagggactgt cacttccttt ttgccgagag aatgatgcaa
     1201 aaggactgtg tccctacaga atccatccat gatacccctg tccctgtctc ccaaccaact
     1261 ttctcaacaa tattttgaca gacaactgtt aattccagat ttgtttttag caccgactgt
     1321 ttcaggagct cttctaggtc agttgagagc acaggagcag aactattgcg gtggagtgaa
     1381 gacaagtcta gccatatctg cttacacaca ctttactgtt ccccaccaca tgaacaaaaa
     1441 ccccctttaa acctccatct cagggtagaa agcttcctcc acctctgggg cgagccacac
     1501 actgcgtcgt ggtcagggta gcagtgagga gcagaggaga gccgcctgcg ctctgcagct
     1561 tgctggattg ccttgtctcg agcatttgca ttatcatttt gtttatattg tttccttttt
     1621 tacaataaag agtacgtttc ataaa
//
