LOCUS       NM_031774                855 bp    mRNA    linear   ROD 26-APR-2024
DEFINITION  Rattus norvegicus Rab acceptor 1 (Rabac1), mRNA.
ACCESSION   NM_031774
VERSION     NM_031774.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 855)
  AUTHORS   Ackermann,F., Schink,K.O., Bruns,C., Izsvak,Z., Hamra,F.K.,
            Rosenmund,C. and Garner,C.C.
  TITLE     Critical role for Piccolo in synaptic vesicle retrieval
  JOURNAL   Elife 8, e46629 (2019)
   PUBMED   31074746
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 855)
  AUTHORS   Vinayagam,A., Stelzl,U., Foulle,R., Plassmann,S., Zenkner,M.,
            Timm,J., Assmus,H.E., Andrade-Navarro,M.A. and Wanker,E.E.
  TITLE     A directed protein interaction network for investigating
            intracellular signal transduction
  JOURNAL   Sci Signal 4 (189), rs8 (2011)
   PUBMED   21900206
REFERENCE   3  (bases 1 to 855)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
REFERENCE   4  (bases 1 to 855)
  AUTHORS   Venkatesan,K., Rual,J.F., Vazquez,A., Stelzl,U., Lemmens,I.,
            Hirozane-Kishikawa,T., Hao,T., Zenkner,M., Xin,X., Goh,K.I.,
            Yildirim,M.A., Simonis,N., Heinzmann,K., Gebreab,F., Sahalie,J.M.,
            Cevik,S., Simon,C., de Smet,A.S., Dann,E., Smolyar,A.,
            Vinayagam,A., Yu,H., Szeto,D., Borick,H., Dricot,A., Klitgord,N.,
            Murray,R.R., Lin,C., Lalowski,M., Timm,J., Rau,K., Boone,C.,
            Braun,P., Cusick,M.E., Roth,F.P., Hill,D.E., Tavernier,J.,
            Wanker,E.E., Barabasi,A.L. and Vidal,M.
  TITLE     An empirical framework for binary interactome mapping
  JOURNAL   Nat Methods 6 (1), 83-90 (2009)
   PUBMED   19060904
REFERENCE   5  (bases 1 to 855)
  AUTHORS   Stelzl,U., Worm,U., Lalowski,M., Haenig,C., Brembeck,F.H.,
            Goehler,H., Stroedicke,M., Zenkner,M., Schoenherr,A., Koeppen,S.,
            Timm,J., Mintzlaff,S., Abraham,C., Bock,N., Kietzmann,S.,
            Goedde,A., Toksoz,E., Droege,A., Krobitsch,S., Korn,B.,
            Birchmeier,W., Lehrach,H. and Wanker,E.E.
  TITLE     A human protein-protein interaction network: a resource for
            annotating the proteome
  JOURNAL   Cell 122 (6), 957-968 (2005)
   PUBMED   16169070
REFERENCE   6  (bases 1 to 855)
  AUTHORS   Abdul-Ghani,M., Gougeon,P.Y., Prosser,D.C., Da-Silva,L.F. and
            Ngsee,J.K.
  TITLE     PRA isoforms are targeted to distinct membrane compartments
  JOURNAL   J Biol Chem 276 (9), 6225-6233 (2001)
   PUBMED   11096102
REFERENCE   7  (bases 1 to 855)
  AUTHORS   Liang,Z. and Li,G.
  TITLE     Mouse prenylated Rab acceptor is a novel Golgi membrane protein
  JOURNAL   Biochem Biophys Res Commun 275 (2), 509-516 (2000)
   PUBMED   10964695
REFERENCE   8  (bases 1 to 855)
  AUTHORS   Hutt,D.M., Da-Silva,L.F., Chang,L.H., Prosser,D.C. and Ngsee,J.K.
  TITLE     PRA1 inhibits the extraction of membrane-bound rab GTPase by GDI1
  JOURNAL   J Biol Chem 275 (24), 18511-18519 (2000)
   PUBMED   10751420
REFERENCE   9  (bases 1 to 855)
  AUTHORS   Fenster,S.D., Chung,W.J., Zhai,R., Cases-Langhoff,C., Voss,B.,
            Garner,A.M., Kaempf,U., Kindler,S., Gundelfinger,E.D. and
            Garner,C.C.
  TITLE     Piccolo, a presynaptic zinc finger protein structurally related to
            bassoon
  JOURNAL   Neuron 25 (1), 203-214 (2000)
   PUBMED   10707984
REFERENCE   10 (bases 1 to 855)
  AUTHORS   Martincic,I., Peralta,M.E. and Ngsee,J.K.
  TITLE     Isolation and characterization of a dual prenylated Rab and VAMP2
            receptor
  JOURNAL   J Biol Chem 272 (43), 26991-26998 (1997)
   PUBMED   9341137
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 30, 2020 this sequence version replaced NM_031774.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ210487.1, BC086387.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676786, SAMN16676787
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-161               JAXUCZ010000001.1  89694857-89695017   c
            162-374             JAXUCZ010000001.1  89694402-89694614   c
            375-472             JAXUCZ010000001.1  89694059-89694156   c
            473-574             JAXUCZ010000001.1  89692249-89692350   c
            575-855             JAXUCZ010000001.1  89691884-89692164   c
FEATURES             Location/Qualifiers
     source          1..855
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..855
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /note="Rab acceptor 1"
                     /db_xref="GeneID:83583"
                     /db_xref="RGD:621002"
     exon            1..161
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..663
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /note="PRA1 family protein 1; Rab acceptor 1 (prenylated)"
                     /codon_start=1
                     /product="prenylated Rab acceptor protein 1"
                     /protein_id="NP_113962.1"
                     /db_xref="GeneID:83583"
                     /db_xref="RGD:621002"
                     /translation="MAAQKDQQKDAEVEGLSATTLLPKLIPSGAGREWLERRRATIRP
                     WGTFVDQQRFSRPRNVGELCQRLVRNVEYYQSNYVFVFLGLILYCVVTSPMLLVALAV
                     FFGACYILYLRTLQSKLVLFGREVSPAHQYALAGGVSFPFFWLAGAGSAVFWVLGATL
                     VLIGSHAAFHQIEPADGEELQMEPV"
     exon            162..374
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /inference="alignment:Splign:2.1.0"
     exon            375..472
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /inference="alignment:Splign:2.1.0"
     exon            473..574
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /inference="alignment:Splign:2.1.0"
     exon            575..855
                     /gene="Rabac1"
                     /gene_synonym="Pra1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agctcccagc ggcgccactt ccattgagtc cggctcgggt ggggccgcct aggtgctgct
       61 gggctcgggg atatttacag cggttctatt cactgcagcg cagacatggc ggcccagaag
      121 gaccagcaga aggatgccga agtggaaggg ctgagcgcca cgaccctgct acccaagctg
      181 attccctctg gcgcaggtcg agagtggctg gagcggcgcc gtgctaccat ccggccctgg
      241 ggcaccttcg tggaccagca acgtttctcg cgaccccgca acgtaggcga gctttgccag
      301 cgcctggttc gcaacgtgga gtattatcaa agcaactacg tgtttgtgtt tctgggcctc
      361 atcctgtact gcgtggtgac atcccccatg ctgctggtgg ctctggctgt cttctttggc
      421 gcctgttaca ttctctatct gcgcacgttg cagtctaagc ttgtgctctt tggccgtgag
      481 gtgagcccag cacatcagta cgccctggct ggtggtgtct ctttcccttt cttctggctg
      541 gccggtgctg gctccgctgt cttctgggtc ctgggagcca ccctggtact tataggctct
      601 cacgctgcct tccaccagat agagcctgca gatggtgagg aactgcagat ggaacctgtg
      661 taaagtgtcc tccaggacct gccagcctct cctgccggcc tctcctgccg gctggctgtc
      721 ccctctctgt ctgttcttgc cctacctgac ctagacactc agctcaactc agagcctaac
      781 tctgagcctt ccaccctaga cctcaaaccc ggggagaggc ttttgtcttc ggaaataaaa
      841 ctgttacaat tgcta
//
