LOCUS       NM_001109018            3846 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus RAB9B, member RAS oncogene family (Rab9b), mRNA.
ACCESSION   NM_001109018 XM_001054647 XM_346351
VERSION     NM_001109018.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3846)
  AUTHORS   Zhang Z, Wang S, Shen T, Chen J and Ding J.
  TITLE     Crystal structure of the Rab9A-RUTBC2 RBD complex reveals the
            molecular basis for the binding specificity of Rab9A with RUTBC2
  JOURNAL   Structure 22 (10), 1408-1420 (2014)
   PUBMED   25220469
REFERENCE   2  (bases 1 to 3846)
  AUTHORS   Seto S, Tsujimura K and Koide Y.
  TITLE     Rab GTPases regulating phagosome maturation are differentially
            recruited to mycobacterial phagosomes
  JOURNAL   Traffic 12 (4), 407-420 (2011)
   PUBMED   21255211
REFERENCE   3  (bases 1 to 3846)
  AUTHORS   Yoshimura S, Gerondopoulos A, Linford A, Rigden DJ and Barr FA.
  TITLE     Family-wide characterization of the DENN domain Rab GDP-GTP
            exchange factors
  JOURNAL   J Cell Biol 191 (2), 367-381 (2010)
   PUBMED   20937701
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474076.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_346351.3, XM_001054647.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB582565.1, FM074504.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760393, SAMEA5760396
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3846
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq32"
     gene            1..3846
                     /gene="Rab9b"
                     /gene_synonym="RGD1562951"
                     /note="RAB9B, member RAS oncogene family"
                     /db_xref="GeneID:367915"
                     /db_xref="RGD:1562951"
     exon            1..153
                     /gene="Rab9b"
                     /gene_synonym="RGD1562951"
                     /inference="alignment:Splign:2.1.0"
     exon            154..225
                     /gene="Rab9b"
                     /gene_synonym="RGD1562951"
                     /inference="alignment:Splign:2.1.0"
     exon            226..3846
                     /gene="Rab9b"
                     /gene_synonym="RGD1562951"
                     /inference="alignment:Splign:2.1.0"
     CDS             268..873
                     /gene="Rab9b"
                     /gene_synonym="RGD1562951"
                     /codon_start=1
                     /product="ras-related protein Rab-9B"
                     /protein_id="NP_001102488.1"
                     /db_xref="GeneID:367915"
                     /db_xref="RGD:1562951"
                     /translation="MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEF
                     LNRDLEVDGRFVTLQIWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQ
                     KEFIYYADVKDPEHFPFVVLGNKVDKEDRQVTTEEAQAWCMENGNYPYLETSAKDDTN
                     VTVAFEEAVRQVLAVEEQLEHCMLGHTIDLNSGSKASSSCC"
ORIGIN      
        1 ggccaccgag gtccaagctg cacttgctgc cccattgagg acgaggtggc agcttgagct
       61 gcgaccgggt cgccaaggag ccaggctaga ggcacgcaga gctgacctgc ccggcatctg
      121 cagccctgtc ctctgtccct cccattgtgt tggaactcga ataaaatata aagcaacaaa
      181 aaggacaaag gagaacattg aaattgtgaa aagaacccta agtaggttct tttgtttgca
      241 gaaggctctg tgtttggtgc tgcgacaatg agtgggaaat cccttctctt aaaggtcatc
      301 ctcttgggtg atggcggagt tgggaaaagc tcacttatga accgttatgt aaccaacaag
      361 ttcgactcac aggcttttca cacgataggg gtagagttct taaatcgaga tctggaggta
      421 gatggacgct ttgtgaccct tcagatctgg gacactgcgg ggcaagaacg tttcaagagc
      481 cttagaacac cattctacag gggagccgac tgctgcctgc tgaccttcag tgtggatgac
      541 cggcagagct ttgagaacct tggtaactgg caaaaagaat tcatctacta tgcagatgtg
      601 aaggaccctg agcatttccc ctttgtggtt ttgggtaata aggtagacaa agaggatagg
      661 caagtgacga ctgaggaggc acaagcctgg tgcatggaga atggaaatta cccttatcta
      721 gaaacaagtg ccaaagatga tactaatgtg acagtggcct ttgaagaagc tgttaggcag
      781 gtgttagctg tagaggagca gctggaacac tgtatgctag gtcacaccat tgatttgaac
      841 agtggctcca aggcaagttc ttcttgttgt tagatgtagg gactcttgac aagtgtgcac
      901 taagttggtc agtctgtagt gtaaaaacta ctgtgctctc tggtagtatg cacacacaca
      961 tacacacaca tgcacacact tgtacatgga aacatgcatg cgattgcacg cacacaggtg
     1021 cgtgtatgca cagacacata tacatggaaa cacgcacgtg attgcatgca cacaggtgtg
     1081 cgtgcataca cacgtgaaag tacatgcatg catgtgatca tacacacaca catacacata
     1141 cacacacata cacacacaca cacacacaca cacacacgaa ggtaaaagat aatgttctgt
     1201 ttttgaaaca gaacctttca aattgaagtt gtagagcagt ttttaaaaaa gctttattga
     1261 gccaagtgta ttttgcgtaa tttctgctgt tttcccttct tgtgtgcctc aggacatttc
     1321 agagagtttt agtcctgaga gatttaagta tttttaaatc atagtctaaa cctagaaccc
     1381 agccgcatga aggagtgaaa gagcttaaag tgttccatta accagctagc aaaggccatc
     1441 accagattct tgccaagaag tttatgtcat ttctaccaaa gggaaaaaaa taagactctg
     1501 agctgtgtta ccacaacaat aatggaagta aggatttcta aacatgtata agaaaaagac
     1561 ggtgatgatt aggactgtag atgtataaaa acacacacgc tgacatgttc acatccttat
     1621 gtatggttta ctctcacatg aactgaagaa aaatcatgtc tataagaatt actctaatga
     1681 cactggaggt tgattctaat ccatgtgttt gagtcacaga acactactga atggattatg
     1741 cttaaatatg ccaaccacct ttgcaaatac aaggttggtc tgcttttcct tcattaagtc
     1801 tactgctgct gcatagagag agctgttgct tccttgacaa cttatcaatt tagtgatgct
     1861 gcttagtgtg tggcttcggg tgcagtgctc tctgcctaca ttgtacatgg tcctatggct
     1921 caccatgctg gctcatgcag aaggcctcag aaaggattgg agagtgatgg gcttttctca
     1981 caggttcctt aactcagttg tttgttagat ctcagatctc agaaggatct gattcttggg
     2041 atgtctcccc gaatgttcag ctggccaaac taggacatta aaattggcaa aggagcagat
     2101 tttttttaac tttgtgttag gatgaattcc tcataattaa atttgttcaa atgtggaata
     2161 gactgcctta atcgtgctcc ctcccaataa aagtagtcac tgactgacca tttgttaaca
     2221 tactgtaaaa agaattcctg tactggctac atgtttggta taaagttcct tcaggcttac
     2281 gttctgaaca tacaaactat gtcagtgcca tgttctggtt gaacttacat gaaagtaaaa
     2341 gttaaaagta tagtgagggc cttcaaaaat cctcaagcca ttctgggatt ggcctttaac
     2401 agcaacgact attaaaaaat atcccaaagg taccatgttt gtaacaaaaa tggtttgaca
     2461 atttttgaat accatgactg ccaattatat atactatatg atgagtgtgc catctggttt
     2521 ttgtaattag ttgacctgca tggattttaa tctgtgcttt aaaaaatgta tgataaaaag
     2581 tatgaaccaa tgtagagagg gacagttaga taaggccccc aaagagattt aggcctggga
     2641 ttgggtggga gcattcacag gaatacagcc tagaattctc cattgtagcc acacatggaa
     2701 tcagccttac ctgtgggacc ttatgtgctt taagaacgct ggtacttttg gccacgtaga
     2761 caagagtagg acagtattta tttcaactca gacttactca atatttaaat tattgtatag
     2821 tcctgaccct attgtccagt taatttagat gccagaagtc aaagccagaa ctgggacccc
     2881 acaactctta aatattggtt cctatcctgc ctatgcctat agccagccac actggtttca
     2941 atgttctata gtcgttttgc tacaatcatg ttagggtgaa aatctgtacg tcagaactaa
     3001 taaatggtaa ttatttttta agtgcatgag acctggggcc ttctctttct acttgcactc
     3061 tgcttataat agtttctatc tgtagatctc aggccttcat aaagatctcc atcagctcac
     3121 aaaaagtatt tgtctctgta gagtggcatg tggccatttg agtaaaaatc aaagtacacg
     3181 agggttcagt tcacagacat cctgtccgtc gagacaagtg ttaattttat tggcaggcat
     3241 actgaagccc ctttcttctt agccatacat ttttttccta ccaaatcact tcacaatgtc
     3301 aagtgcttaa caatatgtga caaaacagtg gtgttttagt gagtgacact cagcgggtgt
     3361 taacgtagtt tgggtaagag taaaaacacc aaaagctgat tagccatggt accaagaact
     3421 gtgcatatgc gttcagaaat agactgcata tctagaatat gcagtgaaat attttcaata
     3481 ggtgtttttt aatgaacact agatagttaa tgaacactag atatttaatg aacactaata
     3541 tatgtctaat tagaagtata ctgttttcaa tagtccatta aatattatat aaaatattta
     3601 tttaatttat catcacgcat tggctttcaa ggggcttcag atcccacgtc ttcagtggat
     3661 tgatgcattt ccggtgtctt tgtgcctgcc ttggccatct ctactctatc ctgaggtatt
     3721 ccaccattct cttgttgcag gtgctgctaa aaatctcaaa aaaaaaatgt ggataagata
     3781 ttttgttcca gttgtttgaa aaaatcatct gtgtcaaagt gaataaaaag tgcattttga
     3841 ataacc
//
