LOCUS       XM_008769491            2134 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rab7b, member RAS oncogene family
            (Rab7b), transcript variant X2, mRNA.
ACCESSION   XM_008769491
VERSION     XM_008769491.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051348.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008769491.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008769491.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="13"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2134
                     /gene="Rab7b"
                     /gene_synonym="RGD1562617"
                     /note="Rab7b, member RAS oncogene family; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 4 ESTs, 4 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     36 samples with support for all annotated introns"
                     /db_xref="GeneID:501854"
                     /db_xref="RGD:1562617"
     CDS             478..1077
                     /gene="Rab7b"
                     /gene_synonym="RGD1562617"
                     /codon_start=1
                     /product="ras-related protein Rab-7b isoform X1"
                     /protein_id="XP_008767713.2"
                     /db_xref="GeneID:501854"
                     /db_xref="RGD:1562617"
                     /translation="MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGAS
                     ILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIW
                     RDDVLAKIVPMEQSYPMVVLGNKIDLEDRKVPQEVAHEWCKEKDMPYFEVSAKNDINV
                     VQAFEVLASRALLRYQGIAENHLADSIKLSPGQPRSKCC"
ORIGIN      
        1 ctgtatctgc agcatcagtc accatgcttt ggggacaggt gtacagagag ataagaggtg
       61 ctgtctaggg tacgggtagt ctacttgggg aagcaggaaa aacatctccc caaagagctt
      121 aaagaatgag aaccgggagc tctgagagca gcgttgtggg tgtgctttgt ggaggaagca
      181 ggtttagacc tgcaaggatg gctgggtgat gcagactgtc acgtgacaac tggcaggcaa
      241 caaagcctcc tgtgccccga gaacacatca aacagaaagc cttatgctca gcctgtgagt
      301 tcactgttag aatgaataaa gttcggggtg caaaggggag acgagaaacc gtggagcaag
      361 actagaagca gaggaaagac cggacagaga aactgggact gctgcaaaac tctcagctgc
      421 ccctgttcac tggtctccct ggcaacttgc gtaggacctc atccaggaca agccctcatg
      481 aatccccgaa agaaagtgga cttgaaactt atcattgttg gtgcacttgg tgtgggaaag
      541 acctctctcc ttcatcaata tgtacacaag acattttttg aggaatacca gaccacactg
      601 ggggccagca tcctctccaa aattatcata ctggatgaca caactttgaa gctgcagatc
      661 tgggacacag gtggtcaaga gcggttccgc tcaatggtat caacattcta caaaggttcc
      721 gatggctgta tcctggcatt tgatgttact gatccagagt cctttgaagc cctggatatc
      781 tggagggatg atgtcctggc aaagatcgtc cctatggagc agtcatatcc catggtggtg
      841 ctgggcaaca aaatcgatct ggaagatagg aaggtgcccc aggaggtggc ccatgaatgg
      901 tgtaaagaga aggacatgcc atactttgaa gttagtgcga agaatgacat caatgtggtg
      961 caggcctttg aggttctggc cagccgggct ctgttgaggt accaaggcat tgccgagaat
     1021 caccttgcag actccatcaa gctctctccg ggccaaccaa ggagcaaatg ctgctgatcc
     1081 tggaccccct ccttccagac tcctgatgct caatccctca agcccgtagt cagcgaggag
     1141 actgagccac tgcagcagga gagactgtca caaggcaaac cctggctcca gagaaatcat
     1201 gggagtcttg atgactcaag cttttctttc tcctctcctc caacacaatc ctgcgagtct
     1261 ctggagacaa gcctctccct tgagcactga ggagctttgg atggaaatgc acctctgact
     1321 ccctcagcag ccaggacacg gaccgctcct gacaggcaga agcctacagg cctgagactt
     1381 cccacggctt cttccaaaga gagctgaggg agcaagataa aaccagttgt tcctgcttcc
     1441 tgggtgttca aacggcttcc ataactgacc aggcctcagt gtgccctctg ccaaatgaga
     1501 gctccccagg ttccccatat cccaatgtga gttgaggacc ataaactcca tttaaatctc
     1561 actcactggt gtggccacac acgtttactc cttcggcaag cattttgttg ccttctacgt
     1621 atggtgcgtt gatgtctgga aacacacaaa acaggcagga gtcctggcct cccagaggca
     1681 cacctggaga cagagggaca gacagcaggc caccagcagg acagaggaca gcaatgaggt
     1741 gctattttaa acaaaggggc caagcaggct tccctgtgat gtgacagttg ggctgacagt
     1801 tacagtgcaa gctacaggag tcaggagagg gagcagcaag gccaaggccc tgaggcatta
     1861 gacagctact ttccatgtga aagctctttc cctgaggact caaagctgct gccagtgata
     1921 tcctgttccc agaaggtgcc ttgagcattt gatgactggc cactaggggg cagaagtgtc
     1981 ctctacttcc aggccaggga gttctgggga tacttgaaaa gctggtgttt ctgtcaagaa
     2041 aatggctgaa acatgtcccc aggctgtagg aatgtcagac ctgggctagt tgggtaaaaa
     2101 aaacaaacaa acaaaaaaac aaaacaaaac aaaa
//
