LOCUS       XM_003751377            2111 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus Rab5a, member RAS oncogene family-like
            1 (Rab5al1), mRNA.
ACCESSION   XM_003751377
VERSION     XM_003751377.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003751377.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003751377.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2111
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2111
                     /gene="Rab5al1"
                     /note="Rab5a, member RAS oncogene family-like 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 ESTs, 3 long SRA reads, 19 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:100361891"
                     /db_xref="RGD:2319287"
     CDS             199..846
                     /gene="Rab5al1"
                     /codon_start=1
                     /product="ras-related protein Rab-5A"
                     /protein_id="XP_003751425.1"
                     /db_xref="GeneID:100361891"
                     /db_xref="RGD:2319287"
                     /translation="MANRGATRPNGPNTGNKICQFKLVLLGESAVGKSSLVLRFVKGQ
                     FHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDI
                     TNEESFSRAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFM
                     ETSAKTPMNVNEIFMAIAKKLPKNEPQNPGANSARGRGVDLTEPAQPARSQCCSN"
ORIGIN      
        1 ccgcgtcggc cagtgtgaga agcagcgagt aggcgacgcc gctgcaactg tggcgcgtcc
       61 gatctccggg ccgtgcgtgg cctcactgcc gggaaccgcg ccccagttat tttctccaga
      121 aagaagaaaa cattgatacc ttgcatcctg gaagttcatt taggaatctg aaatcaggga
      181 cttctttata atttggacat ggctaatcga ggagcaacaa gacccaacgg gccaaatact
      241 ggaaataaaa tatgccagtt caaactggta cttctaggag agtctgctgt tggcaaatca
      301 agtctggtgc ttcgctttgt gaaaggccaa tttcatgagt ttcaagagag taccattggg
      361 gctgcctttc taacccaaac tgtgtgtctt gatgacacaa cagtaaaatt tgaaatatgg
      421 gatacagctg gccaagaacg gtatcatagc ctagcaccaa tgtactaccg aggagcacaa
      481 gccgccatag ttgtgtatga tattacaaat gaggagtcct tttcgagagc aaaaaactgg
      541 gttaaagaac ttcaaaggca agcgagtcct aatattgtga tagctttgtc aggaaacaag
      601 gctgacttag caaataaaag agctgttgac ttccaggaag cacagtccta tgcagatgac
      661 aacagcttat tatttatgga gacatcagct aagacaccaa tgaatgtaaa tgaaatattt
      721 atggcaatag ctaaaaagct gccaaagaac gaaccacaaa atccaggcgc aaactcagcc
      781 agaggacgag gagtagacct tactgagcct gcacagccag ccagaagcca gtgttgtagt
      841 aactgaactc cagtgtcaac ttcctaaatg gcaaaaacca tggaattggg agcatttagc
      901 cggcccagtg tgacttccaa aaagagacta tggtagaatc aagtttctaa tactgaatta
      961 ttttgagtgt tttgaactta atttttaata acatgcatgt gttcctccag cagtagaaag
     1021 gaaaatgaga actgtgtata cacttgttcc atgggaaatt gcaggggaac agttcatctc
     1081 cagtgggcat ggacccactc ttaacccacc cagtctccaa actgggatga tagtcaggta
     1141 tggaagattc aaaattacta atgtatgctt tagaaaaaca tttttagaag actaaaaata
     1201 tttatgctta gcaacaaaag ccaagcaaat ggtaattttc tttgattgtc ttaaaaagcc
     1261 tacatttcac atattaataa agtaatccca agaaaacagt cctatatctc cagaaagaag
     1321 gaatattggt ggcatcttaa ttttattcag tcatgttact tcttaaaatt taattgaaga
     1381 aaaaaaagtc atgtaacccc atcctgtttt aggaatataa aaactgataa gtgcatttta
     1441 atggatagtg gtcccttcat aggagcttct ttttaagaca aagtggaaac aaaccaggta
     1501 tctgctttct atttaatcac tgttggctat tacatagagg tctgtctaga acagggaggg
     1561 ggctctgctt ccctttggac atgattagtc agtgcactaa ccattatgta cattcaaact
     1621 tgattatttt aaatattcag ctgtactgta aatagagtac tgcattgtag tctccatatg
     1681 tttattattt cctgtaatat ttaagaattg cctaaacata tacaaaatgt acagttacta
     1741 aaacagctaa ttatttcttt ctccccctat gaaaggaagg ggctttgctg ttcttacatg
     1801 ctagaaccat aataaacacc gtacttgcaa tttgtaacgt aagtattaca atgttattag
     1861 taatcttgaa gccttgtttt ttgaagtcca ttttatttta atcagtatat tgcactaatt
     1921 attttaggta ttttcattat atgaaatcta ccatgtgtca gatgatttaa tctatttaag
     1981 tgttgatctg ctagcagaac gtgtacattt tacagtaact caaaattagt aaggagaaca
     2041 gctcaccagt gtttagtttt atattgaggt gctcaggttg gaataaagtg gtgtaaaaag
     2101 caaaaaaaaa a
//
