LOCUS       XM_017601867            3924 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB44, member RAS oncogene family
            (Rab44), transcript variant X2, mRNA.
ACCESSION   XM_017601867
VERSION     XM_017601867.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017601867.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017601867.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3924
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3924
                     /gene="Rab44"
                     /note="RAB44, member RAS oncogene family; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 39 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:309649"
                     /db_xref="RGD:1560150"
     CDS             445..3357
                     /gene="Rab44"
                     /codon_start=1
                     /product="ras-related protein Rab-44 isoform X1"
                     /protein_id="XP_017457356.1"
                     /db_xref="GeneID:309649"
                     /db_xref="RGD:1560150"
                     /translation="MEKGKGLARKSRKLASSRRRQMREPADGQDAPVAPEAGSWPSDA
                     DAELQGFFQNCGAKERGFVTREDLAEARFSFLGNEEPQMIFDWVDVESRGRLSLEEFS
                     SGLKNVFGSSPSTHRLQTKRSLPSQRISATSSFPVFEEADTEEKEAFLTLVGQMETGH
                     SLSEQAELWKLWRELRQEEPQLAGNLEGFLAKMSSRLQEARADREALAWTLRKRDSDH
                     LHKVRQLYEETEEQIRREKQQLQAQSNSRGMALSAHMQEALEAKEQEVQRLAEGQREL
                     EAQLLHLSSTQQEASLENLQLREVERDLTGQLEEVRGQLQVTRGHLDTARTRGRVSWQ
                     VEEEPSVPRANTEAPDLQAVPTEEAPLPELFGVNDDWDKLLSSFEDPTHRTLRLCWSP
                     PPSPSDTSAPQTPRIVRQISISNMSALPFSQEPASDLDPGPRSTSEMSPDSARDTKGV
                     EDPKGQDGQDVSSKQLVNSADLDARLQGPFLRSPPGVPAGDSGNVEEATFRVLLASEA
                     ELPPQGLSSPPQSPTGSGKQTQTSDLGDKSLWSGPDAAKLTIEREVMAEDLKLGLGSQ
                     GDTALPEEATEPSLSLESVDQVHTETPGQDEAHLARLESHSRGYQEASGQDLHLDSLS
                     THLPQSLEEQLGPEEGNLGERGQQDPGTEADEAHSLEAWNTESLQQDDPLPNRSQAPA
                     EVEVTAPDQTSPPILGAGAGLAVGAPETTQVLLTLAESEVQPRPMSMPLQVEIKSDAP
                     QPPEPGAESRPEDPRTDLQEAEPSSSPGDLTAGKPQADPDYLYHVIFLGDSNVGKTSF
                     LHLLHHDSFAAGLTATVGVDFRVKNLLVDNKTFALQLWDTAGQERYHSLTRQLLRKAE
                     GVVLMYDVTSQESFTHVRYWLDCLQDAGVEGVAMVLLGNKTDCEEERQVPTEAGRRLA
                     QELGISFGECSAALGHNILEPMMNLARSLKMQEDRQKASLVEVTRQEPPKRAGCCR"
ORIGIN      
        1 ttccctcctt ccctccctcc cttccttcct tccctccctt attccttcct ttgagagaga
       61 tagtctctct atgcagccca ggctggcctt aaactcacta tatagccaaa catgaccttg
      121 aactcttgat cttcctgcct gggtgcaggc attgtactac aaggccgggc tccatctagc
      181 ctctgagtct taggagcgca aattgagttt ggctacttct gtgctatggg accgagagac
      241 cagggctgtg tgtgttatct cctgtgagtg agacgtagat tgtgaacttg tgagactggg
      301 caggtctcct ggcctcttag agactcagtt tctctatccg ttaagtgagt gaagctgatg
      361 agaggacagg ccactgggac taggtggctc tcaggggcat tggtggtaac cgcgcggttg
      421 gcttttccca aggtctgagg caccatggag aaaggaaaag gactggccag aaaaagtagg
      481 aagctggcat ccagccgccg gaggcagatg cgagagccag cagacgggca ggatgccccc
      541 gtggccccgg aagcggggtc ctggccctct gacgctgatg cggaacttca gggtttcttc
      601 cagaactgtg gtgccaagga gaggggcttt gtcacccggg aggatctggc ggaggccagg
      661 ttcagcttcc tgggtaacga ggagccgcag atgatatttg actgggtgga cgttgagagt
      721 aggggccgcc tgtcgctgga agaattcagc tctggactca aaaatgtctt tggctccagc
      781 cccagtaccc acagactcca gacaaaacgg tcattgccct ctcaacggat atctgcgacc
      841 tccagcttcc ctgtcttcga ggaggccgat actgaggaga aggaagcctt cctgaccctt
      901 gtagggcaga tggagactgg ccactccctt tctgagcagg ctgagctctg gaaactgtgg
      961 agagagctgc ggcaggagga gccccagttg gcaggcaact tggagggctt cctagccaag
     1021 atgagcagtc gcctgcagga ggctcgggcc gaccgggagg cactggcgtg gaccctgaga
     1081 aagcgagact ctgaccatct ccacaaggtg agacagctct acgaggagac agaggaacag
     1141 atccgcaggg agaaacagca gctgcaggcc cagagcaact ccaggggcat ggccctcagt
     1201 gcccacatgc aggaggccct ggaggccaag gagcaagagg ttcagcggct agcagaaggt
     1261 cagagagagc tggaggccca gctcctccac ctcagtagca cacagcaaga ggccagcttg
     1321 gagaacctgc agctccggga ggttgagcgt gacctgaccg ggcagctaga agaggtgcgg
     1381 ggacagctac aggtgacaag aggtcacctg gatactgcca ggaccagggg ccgagtgtcc
     1441 tggcaggtag aggaagagcc aagtgtcccc agggcaaata cggaggcccc agaccttcag
     1501 gctgtcccca cagaggaggc cccactgcct gagctgtttg gggttaacga tgactgggac
     1561 aagctcctca gcagcttcga agatcctact catagaaccc tgcggctttg ctggagccct
     1621 cccccatccc caagtgacac ctccgccccc cagactcccc gcattgttag acagatctcc
     1681 atttccaata tgtctgctct gccgttttct caggagccag cctcagatct agacccaggt
     1741 ccaagaagca cctctgagat gtctcctgat agtgccagag atacgaaagg ggtggaggac
     1801 cccaaggggc aggatggaca ggatgtcagt tctaagcagc ttgtgaactc cgctgactta
     1861 gatgccaggc tccagggtcc cttcctcagg agtccgccag gagtcccggc tggggattct
     1921 gggaatgttg aagaagccac tttcagagtt ctgcttgctt ctgaggctga gcttcctcct
     1981 caggggctct cttctcctcc tcagtcccca accgggtccg gaaaacagac ccagacttca
     2041 gatctgggtg acaagagtct ttggtctgga cctgatgcag ccaaactgac catagagaga
     2101 gaagtcatgg cggaggacct gaagctgggc ttagggtccc agggagacac agctctccct
     2161 gaggaggcca cagagccctc cctgagcctg gagtctgtgg accaagtaca cacagagaca
     2221 ccagggcagg atgaggcaca tctggccagg ctagagagtc attctagggg ttaccaagaa
     2281 gccagtggcc aagacctgca tctggatagc ctgtctaccc acctccccca aagtctagaa
     2341 gagcagcttg ggcctgagga agggaactta ggagagagag gccagcagga ccctggaaca
     2401 gaagccgatg aggctcacag cctggaagcc tggaacacag aatccctcca gcaagatgat
     2461 ccccttccta accgatctca ggctcctgct gaggtggaag tcactgctcc tgaccaaacg
     2521 tctcctccca tcttgggggc tggggctggg cttgcagtgg gagccccaga gaccacacag
     2581 gttctcctca ccctggctga gtcagaagtc cagcccaggc ccatgtccat gcctcttcag
     2641 gtggagatca agtcagacgc ccctcagccc ccagagccag gggcagagag caggccagag
     2701 gacccaagga cagacttaca ggaggctgaa ccgagttctt cccctgggga cctcactgct
     2761 ggcaagcctc aggctgaccc cgactacctc taccatgtca tcttcttggg ggactccaat
     2821 gtgggcaaga cctcattcct acacctgtta catcacgatt cgtttgccgc tggactgacg
     2881 gccactgtag gagtggattt tcgagtcaag aacctgctgg tagacaacaa aaccttcgcc
     2941 ctgcagctgt gggacacggc cggacaagag aggtaccaca gcctcacgcg acaactgctt
     3001 cgcaaggcgg agggggtagt gctcatgtat gacgtcacct cccaagagag cttcacccac
     3061 gtgcgttact ggctcgactg tctgcaggac gcaggtgtag agggggtggc catggtactg
     3121 ctgggaaaca agacggattg tgaggaggag aggcaggtgc ccactgaagc tggcagaagg
     3181 ctcgcccagg agctggggat ttccttcggt gagtgtagcg cggccctggg tcacaacatc
     3241 ctggagccca tgatgaacct ggctcggtca cttaagatgc aggaagaccg ccagaaggcc
     3301 tcactggtgg aagtgacccg ccaggagcca cctaagagag ctggctgctg ccgctgatca
     3361 ctggcctggt cccatcccgg attgactctt cccatggctc ccattctgct tcctagacac
     3421 agctgtgatg gagaagacct tcaggggaca atgcaacctc tcctccactg aacaaacaca
     3481 ccaggggtgg gtggcaggac ccatctagaa actccacaca agcaaagtgt cctcagatct
     3541 tttgttcaag atggtagggc attctcgttt aatttctgct atggtaaaga ctggccaaaa
     3601 acagctcaga ggagggaaag gattatactt ccaggtctct gtccatcact gtcagagcag
     3661 gaactgactc aggaaccatg ggggaccgct gctcagtggc tcacacacag tgcctaatgc
     3721 ttagctagct tttataggta gcccgggtcc acctgcctag ggatggcacc acccacagtg
     3781 gattgagccc tcctgaatcg atcatcaagc aaggcagtgc cccatcccag gccaatctgg
     3841 caaggttaat tccctattta ggaatttccc agtgcctcta gattgtgtta cgttgataat
     3901 aaaagctaac gaggatgcag gaca
//
