LOCUS       NM_001107076            1861 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus Rab40b, member RAS oncogene family (Rab40b),
            mRNA.
ACCESSION   NM_001107076 XM_001081838 XM_221213
VERSION     NM_001107076.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1861)
  AUTHORS   Spano S, Liu X and Galan JE.
  TITLE     Proteolytic targeting of Rab29 by an effector protein distinguishes
            the intracellular compartments of human-adapted and broad-host
            Salmonella
  JOURNAL   Proc Natl Acad Sci U S A 108 (45), 18418-18423 (2011)
   PUBMED   22042847
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473948.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_221213.4, XM_001081838.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168956.1, CK479293.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1861
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.3"
     gene            1..1861
                     /gene="Rab40b"
                     /note="Rab40b, member RAS oncogene family"
                     /db_xref="GeneID:303754"
                     /db_xref="RGD:1305663"
     exon            1..255
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
     CDS             111..950
                     /gene="Rab40b"
                     /codon_start=1
                     /product="ras-related protein Rab-40B"
                     /protein_id="NP_001100546.1"
                     /db_xref="GeneID:303754"
                     /db_xref="RGD:1305663"
                     /translation="MMSSLGSPVRAYDFLLKFLLVGDSDVGKGEILASLQDGAAESPY
                     GHPAGIDHKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWS
                     FDGINRWIKEIDEHAPGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLC
                     NFNITESFTELARIVLLRHGMDRLWRPSKVLSLQDLCCRAVVSCTPVHLVDKLPLPVA
                     LRSHLKSFSMANGLNTRMMHGRSYSLTANSSHKRNSFRKVRTIRPPQSPPRNCARNSC
                     KIS"
     exon            256..316
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
     exon            317..377
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
     exon            378..455
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
     exon            456..678
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
     exon            679..1861
                     /gene="Rab40b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctgtcaagcg cccccggccg gtggggcgtt cgaggggccc gcggcgctcg gggaccctcc
       61 gccgcctgcg cgcagcctgg ggccggcatg ggcggggtgg ctgggccggc atgatgagct
      121 ccttgggcag cccggtgcgg gcctacgatt ttttacttaa gttcctgttg gtgggcgaca
      181 gcgacgtggg caagggagag atcctggcca gcttgcagga cggagcagcc gaatctcctt
      241 acggccaccc ggcgggaatt gatcacaaga cgaccaccat cctgctagat ggccgaaggg
      301 tgaaactgca gctttgggac acctccgggc aagggagatt ttgtaccata ttccgctcgt
      361 actccagagg tgcacagggt gtgatcctgg tctatgacat tgccaaccga tggtcctttg
      421 atggcattaa tcggtggatt aaggagattg atgagcatgc ccctggggtt cctaaaatct
      481 tggtgggaaa ccggctacac ctggcattca agcggcaggt acccaccgag caggcccagg
      541 cctacgctga gcgcctgggt gtcaccttct ttgaagttag ccctctgtgc aacttcaaca
      601 ttacagagtc cttcacggag ctggcaagga tagtgctgct gcggcatggg atggaccgtc
      661 tctggaggcc aagcaaagta ctgagtttgc aagacctctg ctgccgtgct gtggtatcct
      721 gcacacctgt gcacctggta gacaagctcc ctctccctgt tgccttaaga agccacctta
      781 agtccttctc tatggccaac ggcctgaata ccaggatgat gcatggccgc tcctactccc
      841 tcactgccaa ctccagccat aagaggaaca gcttccgaaa agtcaggacc atccgcccac
      901 cccagagtcc acccagaaac tgtgccagga acagctgcaa aatttcttag agactggaat
      961 tggtggcagc ggcctgtaat cccagctact caagaggctg aggcaggagg atcacaagct
     1021 caagacccat ctgagctaca gagtgagttc tagcccagcc tgggcaattt tgagactctg
     1081 cctcaaaatt ttaaaagtgg actggctctc tgggagagtc tggagacaga cttttccaaa
     1141 ctcaagaaac acagtctcta tcttttaaca gcaacaacgc tgcttccttt ggaatgccta
     1201 tgccaccaat gtggtatgaa tgcccagtgc gctgtgattg acacttttgt gtggatgtgc
     1261 atgaagctct tgttctagac ttgtgtgtgc aaagggaaaa attagtattc tgctctactc
     1321 ctgataatat gaaattatgg atgttacttt ttaatcatga ttgttgtgca acttttttcc
     1381 gcttttatat ggctgataaa atgtgtgtag tgaatagatg ttcaaggaaa tttcagaagc
     1441 aatgataatc agatagtcta gcattactga tactacaagg ggggcctttt gtaaacattt
     1501 taatgtaaaa gccccaactt attaaaaaaa tgctgccact gcacagattg tgtacaacag
     1561 gtctgtccta tttgggtagg acatggattt gataaagttt ttgctatgct gtttactaca
     1621 ttttgagatt aataagtaat ctatattcat atttttctgt aaactacata ttttgtacaa
     1681 agtatcctac aagttgtgaa actatgggaa gaaaatgcca aagatatctc caattatgtt
     1741 gaacacaacc agcattgttt caacggatta gcaaggagaa aggtatttca gtaacagaga
     1801 agtaaaaaca gttatttaag gaaatatttc tcaataaagt ggatacttgc tcctctctgg
     1861 a
//
