LOCUS       NM_001108148            1263 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus RAB39A, member RAS oncogene family (Rab39a),
            mRNA.
ACCESSION   NM_001108148 XM_001072166 XM_236242
VERSION     NM_001108148.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Seto,S., Tsujimura,K. and Koide,Y.
  TITLE     Rab GTPases regulating phagosome maturation are differentially
            recruited to mycobacterial phagosomes
  JOURNAL   Traffic 12 (4), 407-420 (2011)
   PUBMED   21255211
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000008.1.
            
            On Sep 26, 2022 this sequence version replaced NM_001108148.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FN804728.1, AW522779.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN14984031, SAMN16676810
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-338               JAXUCZ010000008.1  63001716-63002053   c
            339-1263            JAXUCZ010000008.1  62984434-62985358   c
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /map="8q24"
     gene            1..1263
                     /gene="Rab39a"
                     /gene_synonym="Rab39"
                     /note="RAB39A, member RAS oncogene family"
                     /db_xref="GeneID:315668"
                     /db_xref="RGD:1311286"
     exon            1..338
                     /gene="Rab39a"
                     /gene_synonym="Rab39"
                     /inference="alignment:Splign:2.1.0"
     CDS             112..765
                     /gene="Rab39a"
                     /gene_synonym="Rab39"
                     /note="RAB39, member RAS oncogene family"
                     /codon_start=1
                     /product="ras-related protein Rab-39A"
                     /protein_id="NP_001101618.1"
                     /db_xref="GeneID:315668"
                     /db_xref="RGD:1311286"
                     /translation="MEAIWIYQFRLIVIGDSTVGKSCLLHRFTQGRFPGLRSPACDPT
                     VGVDFFSRLLEIEPGKRIKLQLWDTAGQERFRSITRSYYRNSVGGFLVFDITNRRSFE
                     HVKDWLEEAKMHVQPFQIVFLLVGHKCDLASQRQVSREEAEKLSKDCGMKYIETSAKD
                     ATNVEESFTILARDIYELIKKGDICIQDGWEGVKSGFVPNTVHSSEEAVKPRKQCFC"
     exon            339..1263
                     /gene="Rab39a"
                     /gene_synonym="Rab39"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggccgcagc cgcaggaaga tgctggaagc cggcgggcgc gcgcctcgta ggtgctgaag
       61 ggacagttcc ttcggcagaa cttgctcctg agcgcactgg gcacgtaagc gatggaggct
      121 atttggatct accagttccg cctcatcgtg atcggtgact ccacggtagg caagtcgtgc
      181 cttctgcacc gcttcaccca aggccgcttc ccagggctgc gctccccggc ctgcgacccc
      241 acagtcggcg tggacttctt ctcgcgcctc ctggagattg agccaggcaa gaggatcaag
      301 ctgcagcttt gggacacggc ggggcaggag cgattcagat caataactcg atcctattac
      361 cgcaactcag ttggaggatt tttagtgttt gacattacta accgacggtc ttttgaacat
      421 gtgaaagatt ggctagaaga agcaaaaatg catgtgcagc cttttcagat tgtatttcta
      481 ctggtgggac ataaatgtga tctagcttca caacgtcagg tttcaaggga ggaagctgag
      541 aaactgtcaa aggactgtgg aatgaagtac atagaaacct cagcaaagga tgccacgaat
      601 gttgaagagt cctttacaat cttggcaaga gacatatatg aacttattaa aaaaggagac
      661 atttgtattc aggatggatg ggaaggggtt aaaagtggtt tcgttccaaa tactgtgcat
      721 tcttctgagg aagcagtgaa gcctagaaaa cagtgcttct gttgacttca acctgtcgaa
      781 gaactaccac agacagacca tgttgctctg gatagatgtc aacattgaca gcagaatgac
      841 aaaaggagtg aacatctacc aacatccaga cccatttcat aagctggtgg acacaacgct
      901 gtgtccactt aacaccaaca gactgggtag tctgctaagt taggaggaaa aggagacaac
      961 ttttttcttg aaaccagggt ctacaaagtt acatcccttc tcactttgtt agggtatagc
     1021 tgaccttagt gcccagatgt gtcggtatta atcatccctc ttgacagttg aaaataggtt
     1081 ttctcgtaca catgtaattc agctgaaaag aatgtatcag gattcatttt ctcctgggtt
     1141 aactagtatt gaaaacaaag tgcacttgaa gggccaatga ggtgattcac tgggtaagga
     1201 agcttgccac cagatctgta gacttgagtt tcattcattc ctggagccac tgtggtagaa
     1261 gga
//
