LOCUS       XM_039099091            3553 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB36, member RAS oncogene family
            (Rab36), transcript variant X2, mRNA.
ACCESSION   XM_039099091
VERSION     XM_039099091.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051355.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3553
                     /gene="Rab36"
                     /note="RAB36, member RAS oncogene family; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 14 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:690407"
                     /db_xref="RGD:1596098"
     CDS             931..1734
                     /gene="Rab36"
                     /codon_start=1
                     /product="ras-related protein Rab-36 isoform X2"
                     /protein_id="XP_038955019.1"
                     /db_xref="GeneID:690407"
                     /db_xref="RGD:1596098"
                     /translation="MRSSWTPLGPPVSQDRIITSFPKWYTPDACLQLKEHFHSQVSTA
                     CQHRNTGTAGLRLSKVVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFEIERFEIA
                     GIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTKQWLQDVLRENE
                     AGSCFIFLVGTKKDLLSGAACEQAEAEAVHLANEMQAEYWSVSAKTGENVKAFFSRVA
                     ALAFEQSVLQDLEKRPSTQSQVGDGDGDLIRIEVPKTQENKRPPGLGCC"
ORIGIN      
        1 ccactcaccc tcccggctgc ggaagcttcc cggaggttat ggtcctgagg ctgtcgagtg
       61 tccagccctc ctcctacccc caaacctgag tgtggcctgc aggcctgctc ttcctcactg
      121 agcatccatc ctgggccagg cctctggtgg gagctgggtc agaagaggac agcaaatttg
      181 ggaatggtgg tggggtggag tagattctag gtgatagagg actatcaggg aaagtggctg
      241 ggacctcaag tcactccgag actccatctt aaaacagact aagggcaggg gacccctccc
      301 tgctctgctt ctattacctg ggctgtgatt cacagccagg attggggttt tttggttggt
      361 tggttcggtt tggtttttgg tttgtttgtt tgtttgtttt gcatgcctcc catatgccaa
      421 ggaagtgagt ccagagaagg aacccctctt actaggcatg gggtcaaggg gacctcacct
      481 cctgactcta ggcaagatgg ggtgtgtggg ctgcccctcc tccactgtgc tgcctgcaga
      541 atgaatggcc tccacttaat gtcgctgata ggaacgggga ccgcagatgt gtttgaactc
      601 acaggcgcat tttgacaacc tgtatggctt tccgagcctt gttaaaggac aagtataaca
      661 atcctcgtcc taatggaacc ctgtgaatct ggaaccgggc agcacttcgt cctgtgaaat
      721 aaatggagtg tcatcacgtt ttggttggtt cggtttgggt ctctctgctg cgtgaagggc
      781 tctcagtgtg tcactcaagg gctccggaac tcattctcct cctccctctg tttcccaagt
      841 gctgagggta tggacctgcg tgtcactacc acacgtggct aggaagttga ttttatcgaa
      901 gaataaaaat gtctacagaa cactggaaga atgaggtcct cttggacccc tctggggccc
      961 cctgtgagcc aggatcgaat catcaccagc ttccctaagt ggtacacgcc ggatgcctgc
     1021 ctgcagctca aggagcactt ccacagccag gtcagcacag cctgccagca caggaacacg
     1081 ggcactgctg ggctcagact ctccaaggtg gtggtagttg gtgatctcta cgtgggaaag
     1141 actagcctca ttcacaggtt atgcaagaat gttttcgacc gggattacaa ggccacgatt
     1201 ggtgtagact ttgaaatcga gcgctttgag atcgcaggga ttccctacag cctccagatc
     1261 tgggacacag ccggacagga aaagttcaag tgcattgcgt ctgcctacta ccgcggtgcc
     1321 caggtgatca tcacagcctt tgacctcacc gacgtgcaga ctctggagca taccaagcag
     1381 tggctgcagg atgtgctgag ggagaatgag gcaggttctt gcttcatctt cctcgtggga
     1441 accaagaagg atctcctgtc aggggcagcg tgcgagcagg cggaagcaga agctgtgcat
     1501 ctggccaatg agatgcaggc agagtactgg tctgtgtcgg ccaagacggg agagaacgtg
     1561 aaggcattct tcagccgagt cgccgcccta gcctttgaac agtctgtact tcaggaccta
     1621 gagaagaggc ccagcaccca gtcccaggtc ggagatggag atggagacct aatacgaata
     1681 gaggtaccga agacgcagga gaacaaaagg ccacctggcc tgggttgctg ttaactgagg
     1741 ccagcatcag agccatcaca gggtgtgaca tagagcccaa gctcttcagt ggacatgcct
     1801 taaagctgga gaagccctgt gtctccagag cccagccatt tctctttagc cggtcagcag
     1861 ccactggctg ctgaaacccc atactgcctg gctggttgat gggcaccagg gtgagccttc
     1921 tctttagggt cttcagactg tcaccgtgtt cttaagaggc tccaagactg cgaactcggg
     1981 gcacctcggg ctagcccacg tcccttaccc aattatacca ataactgtgg ggccctttcg
     2041 tgtggatcct ctgggatctc catgttccaa gcacggagac ttgtcagagt gggcaagtaa
     2101 aattaacctg ccatcccagg cagagttctc tctcatcaag aagatatggg gtggggttgg
     2161 ggatttagct cagtggtaga gcgcttgcct agcgagcgca aggccctggg ttcggtcccc
     2221 agctctggaa aaaaaaaaaa aaaagagtat gtgctgcttt ccatctctag cacccaagtt
     2281 gggtggctga taactgtttg ggggttgggg atttagctca gtggtagagc gcttgcctag
     2341 gaagcgcaag gccctgggtt cggtccccag ctccggaaaa aaaaaaaaaa agaaccaaaa
     2401 aaaaaaaaaa aaagaagaag aagatatggg gttctaggcc tttcagcctc agacctaggg
     2461 ctccctccac ccactgttca aacataatat ggcccctctg gcagattccc gcccccacct
     2521 ctgagattcc ccgtggttct gccctaagta ttgacgggta agaaggcagg cctttggctt
     2581 accactgtga ctgtcccaag ggatggcaac tgcatggtga cctccggatc ctcactagag
     2641 ggatccctgt gaccatcctg agagatgaca gtgcatggtg tccctctgac aactcccaca
     2701 tccctgagcc tgacactgtc ctgtgttgtc acctatgccc atccctgctg gcctcccatg
     2761 tgtctgtccc actggcctgc ttgtctctca ggactttggc atccatcggg ccatgtacct
     2821 ctggaggacg tgggacagcc ggaatctagc atgcctaacc ccattctgca tatcagcagg
     2881 atgcatcctg tgtgggtcca gggtctcccc tgaccacctt acctactctg tatccctgta
     2941 gctctgggtc tggactctcc tgccataaga gggtgggcac acctggcatt cctagctgct
     3001 ccccctcccc ataggcaggg tctcatggaa cccacactgg cttccaactc tatacgtagc
     3061 tgaggcttaa ccttgaattt tatttaccct ccatctccca aatgctaaag ttaccaaact
     3121 gtaccaccat acctagcaac acccgcttct caaggatggt aagcagctgt aggccgccat
     3181 gtaggtccat gcccttttct aagtgcctgg catagcacat ctccccatgg ctgtccatta
     3241 actcagcaat ggccaaacat cggagagcac tgacctatct tccagttcaa tataacactc
     3301 attagcatta gtgtgccctc tccctcccca ctgcccaccc cactctgaaa cagtgtgtca
     3361 ctctgtatat actagactgg ccttgagctt gcaacagccc cctgcctctg tcttccaagt
     3421 gctggggtta cagacccgaa actcataatt tggctcaagg ccttttattc taaaaagtat
     3481 ataagacatc tctttaaagg atttaatgtt tggtattaaa cgaggtggtg gagcaataaa
     3541 aaaaatgcaa gta
//
