LOCUS       NM_001415699            2908 bp    mRNA    linear   ROD 09-APR-2024
DEFINITION  Rattus norvegicus RAB36, member RAS oncogene family (Rab36),
            transcript variant 1, mRNA.
ACCESSION   NM_001415699
VERSION     NM_001415699.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2908)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000020.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMN12840111, SAMN12840113
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            CDS uses downstream in-frame AUG :: upstream AUG and CDS extension
                                                is not conserved
            inferred exon combination        :: based on alignments, homology
            RefSeq Select criteria           :: based on conservation
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-266               JAXUCZ010000020.1  13623248-13623513   c
            267-354             JAXUCZ010000020.1  13622015-13622102   c
            355-446             JAXUCZ010000020.1  13617530-13617621   c
            447-512             JAXUCZ010000020.1  13614976-13615041   c
            513-614             JAXUCZ010000020.1  13613249-13613350   c
            615-679             JAXUCZ010000020.1  13611478-13611542   c
            680-731             JAXUCZ010000020.1  13610119-13610170   c
            732-813             JAXUCZ010000020.1  13609408-13609489   c
            814-904             JAXUCZ010000020.1  13608968-13609058   c
            905-1030            JAXUCZ010000020.1  13608379-13608504   c
            1031-2908           JAXUCZ010000020.1  13606086-13607963   c
FEATURES             Location/Qualifiers
     source          1..2908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..2908
                     /gene="Rab36"
                     /note="RAB36, member RAS oncogene family"
                     /db_xref="GeneID:690407"
                     /db_xref="RGD:1596098"
     exon            1..266
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            267..354
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     CDS             286..1089
                     /gene="Rab36"
                     /codon_start=1
                     /product="ras-related protein Rab-36"
                     /protein_id="NP_001402628.1"
                     /db_xref="GeneID:690407"
                     /db_xref="RGD:1596098"
                     /translation="MRSSWTPLGPPVSQDRIITSFPKWYTPDACLQLKEHFHSQVSTA
                     CQHRNTGTAGLRLSKVVVVGDLYVGKTSLIHRLCKNVFDRDYKATIGVDFEIERFEIA
                     GIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTKQWLQDVLRENE
                     AGSCFIFLVGTKKDLLSGAACEQAEAEAVHLANEMQAEYWSVSAKTGENVKAFFSRVA
                     ALAFEQSVLQDLEKRPSTQSQVGDGDGDLIRIEVPKTQENKRPPGLGCC"
     exon            355..446
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            447..512
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            513..614
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            615..679
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            680..731
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            732..813
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            814..904
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            905..1030
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..2908
                     /gene="Rab36"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggttgtcatg gtgagcccgg ggcgctgcag tggagtccgg aagtctctga gcaagcagtg
       61 cagagctcga ggtcccagga ggctctcgtt gctatggtga tgactccgcg cggggccctg
      121 tgccagccac atccaaggac tggaggaggg tccagacccc gcccccgacg tcaggattcg
      181 ggagctgcga gccagtcccg cgaggccact gttgctgtgg tgatttgcag cggcctgcgc
      241 gccagaacct ggtctttgca gctttgtcta cagaacactg gaagaatgag gtcctcttgg
      301 acccctctgg ggccccctgt gagccaggat cgaatcatca ccagcttccc taagtggtac
      361 acgccggatg cctgcctgca gctcaaggag cacttccaca gccaggtcag cacagcctgc
      421 cagcacagga acacgggcac tgctgggctc agactctcca aggtggtggt agttggtgat
      481 ctctacgtgg gaaagactag cctcattcac aggttatgca agaatgtttt cgaccgggat
      541 tacaaggcca cgattggtgt agactttgaa atcgagcgct ttgagatcgc agggattccc
      601 tacagcctcc agatctggga cacagccgga caggaaaagt tcaagtgcat tgcgtctgcc
      661 tactaccgcg gtgcccaggt gatcatcaca gcctttgacc tcaccgacgt gcagactctg
      721 gagcatacca agcagtggct gcaggatgtg ctgagggaga atgaggcagg ttcttgcttc
      781 atcttcctcg tgggaaccaa gaaggatctc ctgtcagggg cagcgtgcga gcaggcggaa
      841 gcagaagctg tgcatctggc caatgagatg caggcagagt actggtctgt gtcggccaag
      901 acgggagaga acgtgaaggc attcttcagc cgagtcgccg ccctagcctt tgaacagtct
      961 gtacttcagg acctagagaa gaggcccagc acccagtccc aggtcggaga tggagatgga
     1021 gacctaatac gaatagaggt accgaagacg caggagaaca aaaggccacc tggcctgggt
     1081 tgctgttaac tgaggccagc atcagagcca tcacagggtg tgacatagag cccaagctct
     1141 tcagtggaca tgccttaaag ctggagaagc cctgtgtctc cagagcccag ccatttctct
     1201 ttagccggtc agcagccact ggctgctgaa accccatact gcctggctgg ttgatgggca
     1261 ccagggtgag ccttctcttt agggtcttca gactgtcacc gtgttcttaa gaggctccaa
     1321 gactgcgaac tcggggcacc tcgggctagc ccacgtccct tacccaatta taccaataac
     1381 tgtggggccc tttcgtgtgg atcctctggg atctccatgt tccaagcacg gagacttgtc
     1441 agagtgggca agtaaaatta acctgccatc ccaggcagag ttctctctca tcaagaagat
     1501 atggggtggg gttggggatt tagctcagtg gtagagcgct tgcctagcga gcgcaaggcc
     1561 ctgggttcgg tccccagctc tggaaaaaaa aaaaaaaaag agtatgtgct gctttccatc
     1621 tctagcaccc aagttgggtg gctgataact gtttgggggt tggggattta gctcagtggt
     1681 agagcgcttg cctaggaagc gcaaggccct gggttcggtc cccagctccg gaaaaaaaaa
     1741 aaaaaagaac caaaaaaaaa aaaaaaaaga agaagaagat atggggttct aggcctttca
     1801 gcctcagacc tagggctccc tccacccact gttcaaacat aatatggccc ctctggcaga
     1861 ttcccgcccc cacctctgag attccccgtg gttctgccct aagtattgac gggtaagaag
     1921 gcaggccttt ggcttaccac tgtgactgtc ccaagggatg gcaactgcat ggtgacctcc
     1981 ggatcctcac tagagggatc cctgtgacca tcctgagaga tgacagtgca tggtgtccct
     2041 ctgacaactc ccacatccct gagcctgaca ctgtcctgtg ttgtcaccta tgcccatccc
     2101 tgctggcctc ccatgtgtct gtcccactgg cctgcttgtc tctcaggact ttggcatcca
     2161 tcgggccatg tacctctgga ggacgtggga cagccggaat ctagcatgcc taaccccatt
     2221 ctgcatatca gcaggatgca tcctgtgtgg gtccagggtc tcccctgacc accttaccta
     2281 ctctgtatcc ctgtagctct gggtctggac tctcctgcca taagagggtg ggcacacctg
     2341 gcattcctag ctgctccccc tccccatagg cagggtctca tggaacccac actggcttcc
     2401 aactctatac gtagctgagg cttaaccttg aattttattt accctccatc tcccaaatgc
     2461 taaagttacc aaactgtacc accataccta gcaacacccg cttctcaagg atggtaagca
     2521 gctgtaggcc gccatgtagg tccatgccct tttctaagtg cctggcatag cacatctccc
     2581 catggctgtc cattaactca gcaatggcca aacatcggag agcactgacc tatcttccag
     2641 ttcaatataa cactcattag cattagtgtg ccctctccct ccccactgcc caccccactc
     2701 tgaaacagtg tgtcactctg tatatactag actggccttg agcttgcaac agccccctgc
     2761 ctctgtcttc caagtgctgg ggttacagac ccgaaactca taatttggct caaggccttt
     2821 tattctaaaa agtatataag acatctcttt aaaggattta atgtttggta ttaaacgagg
     2881 tggtggagca ataaaaaaaa tgcaagta
//
