LOCUS       NM_001399388            9778 bp    mRNA    linear   ROD 07-JAN-2022
DEFINITION  Rattus norvegicus RAB30, member RAS oncogene family (Rab30),
            transcript variant 3, mRNA.
ACCESSION   NM_001399388 XM_039113127
VERSION     NM_001399388.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 9778)
  AUTHORS   Kelly EE, Giordano F, Horgan CP, Jollivet F, Raposo G and McCaffrey
            MW.
  TITLE     Rab30 is required for the morphological integrity of the Golgi
            apparatus
  JOURNAL   Biol Cell 104 (2), 84-101 (2012)
   PUBMED   22188167
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JACYVU010000041.1.
            
            [WARNING] On Apr 3, 2024 this sequence was replaced by
            NM_001399388.2.
            
            On Jan 7, 2022 this sequence version replaced XM_039113127.1.
            
            ##Evidence-Data-START##
            CDS exon combination :: SRR8487226.61923.1 [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMD00132295, SAMD00132296 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-137               JACYVU010000041.1  7429204-7429340
            138-498             JACYVU010000041.1  7497976-7498336
            499-599             JACYVU010000041.1  7502118-7502218
            600-683             JACYVU010000041.1  7505492-7505575
            684-867             JACYVU010000041.1  7510632-7510815
            868-9778            JACYVU010000041.1  7514944-7523854
FEATURES             Location/Qualifiers
     source          1..9778
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..9778
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /note="RAB30, member RAS oncogene family"
                     /db_xref="GeneID:308821"
                     /db_xref="RGD:1309507"
     exon            1..137
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
     exon            138..498
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
     exon            499..599
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
     CDS             507..1118
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /note="isoform a is encoded by transcript variant 3;
                     ras-related protein Rab-30"
                     /codon_start=1
                     /product="ras-related protein Rab-30 isoform a"
                     /protein_id="NP_001386317.1"
                     /db_xref="GeneID:308821"
                     /db_xref="RGD:1309507"
                     /translation="MSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGV
                     DFMIKTVEINGEKVKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPE
                     WLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAKESDNVE
                     KLFLDLACRLISEARQNTLVNNVSSPLPGEGKSISYLTCCNFN"
     exon            600..683
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
     exon            684..867
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
     exon            868..9778
                     /gene="Rab30"
                     /gene_synonym="Rsb30"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gagtagcagc aggaccaggg cagggactga ctccagtcct tggacttagg acaccgcagc
       61 accttctctt gcgtgcgtga ctcattcgta tatcatttct gtttatgcct ggggtgggga
      121 gaaaaatccc aaaccaggta gtatgtgtga cctgagttgt cacaagccac agaacagaca
      181 caccaccacc atcgccgccg ccgctgctgc caacaccact gccgccgccg ccgccgccgc
      241 ctccaccacc accaccaccg ccgccgccgc cgccgccgcc gccgccgccg ccgccgccgc
      301 cgccgccgcc gccgccacca ccaccaccac cacctccaag cctgacttct gaaacataac
      361 tcagggcttt tgtgaaagtt ccaacgtcaa tgcctttcct tctggtcact gtgaatcctg
      421 ctggttggct gctgtgattt tctgaaagga gcctgtgaaa tagaagtagc tggacctggg
      481 gacagaccaa tgagccagct gtgtaaatga gtatggaaga ttatgatttc ctgttcaaaa
      541 ttgttttaat cggcaacgct ggagtgggaa agacgtgcct agtccgacga ttcactcagg
      601 gtcttttccc cccaggtcaa ggagccacaa ttggagttga ttttatgatt aagacagtgg
      661 agattaatgg tgagaaagtg aagttacaga tctgggacac agcaggtcaa gagagatttc
      721 gctccatcac ccaaagttac taccgaagcg ccaatgcctt gatccttacc tatgacatca
      781 cctgtgagga atccttccgc tgcctgcccg agtggttgcg ggagatagaa cagtatgcta
      841 gcaataaggt catcactgtg ttagtgggca acaagattga cctggctgaa aggagagagg
      901 tctcccaaca gagagcagaa gagttctcag aggctcagga catgtattac ttggagactt
      961 cagccaagga gtctgacaat gtggagaaac tcttccttga cttagcatgt cgactcatca
     1021 gtgaagccag acagaacaca ctggtgaaca atgtatcgtc acccttacct ggagagggga
     1081 aaagcatcag ctatttgact tgttgtaatt tcaactaaag gctgaggcaa agagaatcaa
     1141 agggaatcag tagttgcctt ggtgggccga atgttgctag ggaatctggc aatgactatg
     1201 gctcccgctc ttggaccttc tgactcctgt aggctccaga gcttaccaag catgcaggcc
     1261 aagggccttg actgcaggcc agcattagca gaacacataa tggtttcacc cttttgcagt
     1321 ctggcgttgg agcaaggaga gaattgcact aagcgctcca tgatctgcag agcatgttgc
     1381 ttttgttttg aaaaaagcaa gtaaaatgca ttcctgaaca cagagcaggg gtcgtgtact
     1441 gtaggaatcc ttctgtgtgt cagtgggcgc atgaggggct gttctccagg cttcagtggt
     1501 aatctggtgc ccatggattt cttgtctacc aggtaaacca aaactggaaa ggccaagtac
     1561 tgtctctgta gtacttactg atgaccccat ggagattttg aaaagtgtta tttcttttgt
     1621 tcacaagcac tttcaaaacc tttgggatat aaaaatggga actcttctca tgaccaacag
     1681 tagaaattat tgtttaataa tatatacaag ctccatgact ctttttggtg ctaatgatta
     1741 tgctatttca cagaccaaac gttttggtac attgataccc ttagatgtat tacctaaaaa
     1801 taaaaagaga atgggggaaa tccatgagtc agcagtcttt ttcagtctca ttaccacctt
     1861 ttctgggatg ggtttggata tgagaagccc cttttctttc atattcttga aatttattaa
     1921 ctttcttcta ttcttccaca cttttcctgc ccttcaggtc aatcaaagtt ttaaaaatgg
     1981 ggaaaatata aacgacaaca ttctagtaaa gaatattagt tgtaagacac gttgagtagc
     2041 atgagaaaac agagcagata tgaccaaaat actgtggact atggactggc tgcagagcag
     2101 gcttccagac agcgcagctc tctttaacag gccacgcctt ttcctttctg gaactatcct
     2161 tggatagacc aaggtttagg attttgtaga catttttagt ataataagtg agaatagcaa
     2221 cagattaaaa gtctcacaga ccatttttat atcttcaata aacttaggaa agtgcagctc
     2281 aggaagcagg ctgagctgtc ctttcttgtc ttatgtcaat gttgatctca gattcatgac
     2341 catacatttc tctttatctt ttcttgccct tagtctcccc ttagagcttt cctttcccca
     2401 ctccttcttt ttctctttcc ttcccatact ggtatgcatg tgttactgga catctccagc
     2461 tcagatggag gcatagatgc ctttacttag ccaattttac cacaggactc aaactggaag
     2521 acatgttgct aagtgagttc ctgtttcttc agtgccatgt tttgatactt tccaatttgt
     2581 tcagtgtcat agatgcaaat tacgaaagga agtctgtgtg ctcttggtgt tgtcaggtgt
     2641 tgctgtagcc tgctgtacag cataactgag catgaatcac tgaatgagga tatggtgtgg
     2701 aattccactg ttggtattga tgttacaatc ttggacctgg catgtcactc ttggaaagct
     2761 actgaattac aaaccaatga gtcaacacgg caggacattg ataacacatt tctagcattt
     2821 ctagcagatt ccataatgtc caatcttttt tacatgtgac tgcatgtatt attaccagtc
     2881 attggtattg tgattggctc attatgcttt tcttgattct ataggaaaga aaaagacttc
     2941 ctaaaagttt gaactatctt tcttttatac aggaaggaga caaaacatca ctttaatgaa
     3001 aataaaaatc atttataatt aacctttgct taatagccag caaccaaagg catcagaaga
     3061 taaactaatc aaggttacaa aaaaaatgta tctttctact gtgaatgtcc ctaaatttag
     3121 atttattact tttctttatg gcaaaattct gatctcctca gcataagatg actcagcctt
     3181 gtctcacagc agtgtgttaa aaataacgtt gctttgtgaa ctttaagggc tttgttagat
     3241 tggactaatt tagctccaga ataacagctt ttggggtcac atttatgtta ttattctcat
     3301 tcctttgggc ttatagcgcc cccatctgcc tcttccagtt tagaagctgc tcagaaagct
     3361 ctgctccagg tccatcttgc cctgggtctc tgaggaagtc atactcacca atccttggcc
     3421 cattagtgtg gacacttgag aagcgagaag ctggcccctt acatgccacc gttctgtaaa
     3481 tttaagatta ggccttttga ctatttgttc agtgatgtat ctcaagtttg agaagtcctt
     3541 gacaatattt taggtgcaat aaatatcagt tgaataaatg attcagtgcc aagagttttg
     3601 tttgtttgtt atttttaagt gaaagtcctt gaagtggttc ttgagaaaga atcatttcca
     3661 tctagggcag aacataaata ttattttgcc taataatctt attgccaggg caatatttgc
     3721 tcagataagc ctcctttaca taaaattatt tattggtgaa aaacctccaa gatttagttt
     3781 cctgtaatgt tgttcaactg gtcctgacaa ggccatctct cctcccattt ataatatgac
     3841 atttttttct ttctttcaat aaaattatta aatatgtggc caccttgtgt agtttccaat
     3901 gaaaatacat gttcaggtta tagagtcatg cttggaaaag atctatggaa tcatagtttt
     3961 ctgatatggc caatcataga ctgtttcctc aaagaacttt gtggtttctc cttttcctac
     4021 acagagctgt tttcctttgt attctttcat taggtctgtt gggttatatt aatatttaat
     4081 tatatagagc caatcatcat ttgtatagat ttcaaaggtt acatcattgg ctttttctgg
     4141 ctttcattcc ctctccccac ccatagttta gtcatttttt atgtcaacat ctttccctaa
     4201 gtggaaagac aataactaaa aatgaaactg aaatgtatta gcattatact atgtcaggtt
     4261 ttgattttga aattattaag aaaccactga tcaaaacaag atgtttggac taatatgatt
     4321 caaagcagtg aggctctatg gagggaggaa ggaggcagat ttcttcctct tctcttcatc
     4381 aaagtgtgcc tagaaggacc ctagtgttag atcagggatt tgccagtcta ctctttgagc
     4441 tatcccacaa tatcaacttc acttagacta attctgaaaa acagcagtta caaatcgctt
     4501 tgaacttcat ttttatcccc atgtatcata ccagtggcct taaagacaag gacagttcta
     4561 agtcttagtc ctccagcatg ctgtgcatct catgaccata tttactatta gggatcacag
     4621 tcttaacttc ggaaagcagt tgtaggtgtg gacttctttt cttaaagaat gtttaacagc
     4681 aatggattac tttcttcctt caaccatggt cttgacaggt gtgtttgaaa tcttgttctc
     4741 tgacaagata tattccacat aagcagttat tgttaaacat taaataaagt agatcttctt
     4801 tgggattttt gtccctgtgg cacgagttta tctctgtgtg aaaggctagg tgactttctt
     4861 tcccttacac tgtacaacct cggaatattg gcttatgata gtgtccctcc aggtccgtca
     4921 taattgttga gtgatatcga tgctacttca tctccttcct aagtcacagg atgttcatgt
     4981 tataattcct ctggggagac actcttttct ttactctttg tctttttttt aaatcagacc
     5041 tcagtctgta gctccagaaa tcaggctggc atagaaatca caatgtagtt caggctggct
     5101 ttgaactcat ggtaattctc ttactttagt ctttctatga ttaatgagcc accatggtta
     5161 actctttgaa actgaaaaca aatggaagga taactagctt ggtaagtgaa tttacacaag
     5221 atagttgaag attattcgga ggacttttgt ttgacatggc atagagagga atataaaaaa
     5281 gacccgacag ggggttgggg atttagctca gtggtagagc gcttgcctag cgagcgcaag
     5341 gccctgggtt cggtccccag ctccgaaaaa aagaaaaaag aaaaaaagaa aaaaaaaaaa
     5401 gacccgacaa ttcaaagaga gaatgaagcc tatcacactc aagccataga gacacagatt
     5461 aggctgtgtt ggagagaatt tcacgaaaaa ttggagccct ctatagcagc tgcctttctg
     5521 tcaagcaaac tgagcaaaga agatgtggtg aggacctagt gttgatagga ttggcccaga
     5581 tgttctatta actcagaatc ctaaactgca gtacatcttc ttatgctcaa ttaaatataa
     5641 gttgaccaac agttaacgat attttttaaa gggcattata ttctgtcaca gccttctgtc
     5701 acaggaaaag gttgggacac atgtccttac accgagacgc tgatctgcca ttatgcccta
     5761 aactaaaaac ttttgttagt ccctgttgaa atcaaactgg cttccaggtt aaaaatggaa
     5821 gaagtatcat ttaggcagag gttatatgaa atcatggaaa ttattcatct catttggcct
     5881 aataaacaat gcagtctttt cagaatgtta gaagtggttt agcacaggaa aaccctccat
     5941 tagcgaatcc ccagtagttc agtgttcatg agaggacagg agggtcacag acagaaaggc
     6001 ctccttaaga tttgcctttg gaagtctcaa atgacatttg ttgtttcccc aattttggag
     6061 aaagtgagtt taaaagatga aggccaattc gcttcatata caaagtaaag tgcatgcaca
     6121 aagtacaaaa caggtcttta acttgaaaat aaaaaaacaa tatttgctca ttaaaattta
     6181 tgagccaaat gattccagtt ataaaactgc ttgcaccctt tccagtctga tggtggctct
     6241 tatttagttt ttagaaaagg aaagcattgc tcttgaattg atatggggtg aaacacttga
     6301 atttcgtgag actttctctg actcccttgg gtaagaaatc agaatataaa ggcaagttct
     6361 gctttgacca catcaagtgt atgaggtaaa attctttccc cactgattta aagaagaatg
     6421 gcagatgctg agccgtattc ggatgaaatt cttggtcagt ggtgactgat acctcagaca
     6481 atgatataga gaggtataaa ggtcgggcac tggttggctg tgggcagccc tacaatataa
     6541 aagttacttg ggggtttagg caaagtttga acaggagttt ttttcatctg tgagatggac
     6601 ctgttaggaa tgagataaac tgaaaatatg ttgcttggca aataggaagg actcaaatat
     6661 tagggttttt gtttgtttgt ttgtttgttt gtttttgttt tctctcttcc tagtgaagaa
     6721 tagactttgg aagttggagc agtgacatat gacttaagtc ttaggtactt aggaaactga
     6781 cgtgggaaat aagacaacat agggagactc catcttaaga ctttaagaaa tgatttgggt
     6841 cagtctgtta taaagaattc catttctctg agggttgctt taaaggaagc atctggtttg
     6901 atttgctctt agatgtcagt cacccatttc tttccataca tcttgagaga cattttgtct
     6961 ccatagacga ttccagggtt gtaaactcct tattatcagg aaactttctc ttagaactga
     7021 aatacctcac agtgcaatac aaacctctta ttgatttcat tctccatggg aagaaaatgg
     7081 cttggttgtt atctgtaagg ggtcacatgt gctgtccatt attgcccatt gtctatttga
     7141 aaacttaagt cataaaagtg tgttaaggtg tttatcctta tcctcttggt gaacatcagg
     7201 acagtcattg attaactctt aatttcttaa ttgggatcag atttagataa tcctactgtt
     7261 gatttgttct taattaccca tgcatttctc cctttattaa taatgtacaa tggatatcca
     7321 agtaagacta attctggttc tgtggctctt ctccatctat aggtagaaat gatatcataa
     7381 atcccagtta tgtgatctgc ttttagaatt taattccata tacaacatta ttggatgaat
     7441 gtattactaa tactctaaat gtttttatct ccctttctat gtgtgtgcta caagtttgaa
     7501 ataaaaatta gggtactacc taatagagca aaaattcata tgcacataag aaaagaatct
     7561 cgttagaata attcactagt tgatgaatgg cacttagctt ttgtttaaga ttacacagtt
     7621 atgcctgtgt taagtaataa taataaactt gataaagccc tctgaaaaac agctgctaag
     7681 catactgctt ctggaatgta gtcattagga gtaaatattc tcatgttcta tacaattaca
     7741 gaatgttagt ggaagtttat tgtagactat ttgacaatga atgtccattg atttactaaa
     7801 tgaatttttt aaagtaattt tatccttttt agggctgatg gggactttca ggtccctgac
     7861 ataaaatgtt ttaaatgatt ggaatgctgg cttctacctt tactcattgg agtggcatta
     7921 gacatgccag atgttagcac tcctttgatg gtaaatgaga tacacaaatc tttctcaagt
     7981 agtgcatgag caaagtcgct gttttcagaa aagaaaaaaa aattctgcta aaaatgtcaa
     8041 ctaataaaga actaagacaa gaattgaaga aagtgtgccc tgtatgttac tgcacacact
     8101 gtaaagcatg actttcagca taaggatgac atacgatgca aaatagttca ttctggaaat
     8161 ctcctcagct aattcaaata tttgtagaag ctgctttgtg gagacttaga aaatccctta
     8221 ttttcttttc tctccattaa aacactaata ttttatacag tttcagcaaa caagtttgtc
     8281 agtagatttt atgaactcag ttccttgtat atggctactg gctttatgca taggatctca
     8341 gtaaactaca cacacatata tatcactata taaatcctaa tcatctactt taatagctct
     8401 tggttttaaa tgtgatatgc agatataacc ataccatata tatcttgtgt ccatgtattg
     8461 ggtttactta acaaaaaggc cgttatacat ataagccatt ggtaacctgc atataattag
     8521 ttcaaaacat tgtgtagaaa gatgatttat aaaaaattta gtccagtttc aaaaggggga
     8581 caaagaatga ggaactcaaa atgaaaacat ttttaagtaa aattgtatct ttaaaatttt
     8641 cagataatca cacacagtaa tttgcccctc tgaagtataa aattcagtgt ttttagtata
     8701 ctcaatatac tgtacattgt cactactgtc taacttggga atatgtcatt cctcaaaggc
     8761 tctgtatcca tcagcagcca aacctcctcc ttccccagca tctgggaaca atccatctgc
     8821 tctctgtcta tggatttgcc tttcatataa atattagaca atgtgtggcc tcttgtgcct
     8881 ggcttctgtt aaggttttca agactcatct gtgtggtagc atgaatcagt atttttttta
     8941 tggctaagta atattctaga gtgtgtgtgt gtgtgtgtgt gtgtgagaga gagagagaga
     9001 gagagagaga gagagagaga gagagagaga gagagagagc tgagagagag agattttatt
     9061 tgtgaattaa tcaaattttg gacatttaca ttgtttctac tttctggcta gtaaaagtaa
     9121 tgctgctaga acatttatgt aatttttgta tgtagtcatg gtttatttca catctgcaaa
     9181 aacagattaa caaatcaagt aatttgtatt tatttaaata gaatctttta aagtcctgct
     9241 tggagaataa aacttatgat cttgattaaa gtgttcagtc ggactctaga ataatgcctg
     9301 tcaggtatgt ctgtaaggat atttttgtga ggatgtcatt ttgatatggt tatcagtttc
     9361 atgagggctc cttcagtcct tgaaattaga ctgtcatcat tgagaatttt aaagtgctct
     9421 gcatttcttt aaagacagct atcagtcata ctggagaggg cactcattaa attttgtagg
     9481 atcgttcagt caatgaggga acattttaaa ggtatggttt cttgcatttt aactatctca
     9541 acatttgcat attccttctt ggagaaaaga tcatccaagc ctactgactg ttgtagttta
     9601 agtttttatt attaagaagt aattcataat gagagcaaaa gtgtcaagaa tgtattctgt
     9661 gtgcaaagaa tgaatgtatt taacaaaatc tttttatttg taatgatttt ttttaaattg
     9721 actggaaatt gatttcccat gtacttgtac ataaataaac atttcctgtt gcccccaa
//
