LOCUS       XM_017596569            4956 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB23, member RAS oncogene family
            (Rab23), transcript variant X3, mRNA.
ACCESSION   XM_017596569
VERSION     XM_017596569.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017596569.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017596569.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4956
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4956
                     /gene="Rab23"
                     /note="RAB23, member RAS oncogene family; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 25 ESTs, 5 long SRA reads, 14 Proteins, and 93%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 151 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:367242"
                     /db_xref="RGD:1306867"
     CDS             963..1676
                     /gene="Rab23"
                     /codon_start=1
                     /product="ras-related protein Rab-23 isoform X1"
                     /protein_id="XP_017452058.1"
                     /db_xref="GeneID:367242"
                     /db_xref="RGD:1306867"
                     /translation="MLEEDMEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGV
                     DFLERQIQVNDEDVRLMLWDTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISS
                     WREKVVAEVGDIPTALVQNKIDLLDDSCIKNEEAEGLAKRLKLRFYRTSVKEDLNVNE
                     VFKYLAEKHLQKLKQQVADEPEQTHSSSNKIGVFNASVGSHLGQNSSSLNGGDVINLR
                     PNKQRTKKTRNPFSSCSVP"
ORIGIN      
        1 gttttattgt gatgtataca gaaacaactg aagaagcgta cgtattttga gacagggtct
       61 attgtagtag ttcaggctgt ccttgaattc ctaatcttct tgccaccatt ttttcaagca
      121 ctaggatcac acacatgtgc taccacaccg cgtttgaaat caatttgttt tttttttttt
      181 ttttgcagga tcttttcata tttgtaggtt ggttctttga attattaacc atcacactct
      241 tctattttgt ccagtcacac cctacaaagt gtcttcactc aacacttttt ttgcacagtc
      301 ttatcacttc gatgctacca cgtgcgtctc aggtggtgac agacttctga ggcccctgga
      361 taggggaaac aaggtgcgcc ttcagtaggt ttgcacatcc tgctcacctt ggtctccttg
      421 ggtaccaagg cctgaggctc cgaaacccag cccgtgcctt ccttgccagt gcagggcggg
      481 gccggtgttg agcatgcgca gacgaggtgg cgcatgctcc tcagcgcggc gggcgggagt
      541 cgggcgcgcc ctccatccct accggcgtcg gcgacgagtg gctccgtgaa cccggatact
      601 aataaagttc gctagagact cttaatcgtt ctgaaagagc ggagcgggtg cgaggcgtct
      661 gcggggagga accgggctca gtgctgcggg ctgtgcgttc cgggctcggt gctgcgggct
      721 gtgcattccg ggctgggtgc tgcggttgtg cgttccgggt tgcgggctcc gctctgaggg
      781 ttccgggctg tgggcagagg gcgaagaatt gtttagatag agaagaggaa gttgacttcc
      841 cagaactgag ccagtgtgag cccacaagct ggatgaacac ggtcagatct tggtaaggtc
      901 tgagggagag ggtctgacct cctggagtta gagctggtcc agaaaccgtt cctgtttcaa
      961 aaatgctgga ggaagacatg gaagtggcca tcaagatggt ggtggtaggg aatggggctg
     1021 ttgggaagtc aagcatgatt cagcgctact gcaaaggcat ttttacaaaa gactacaaga
     1081 aaaccatcgg cgttgacttt ttggagcggc agattcaagt taatgatgaa gacgtgaggc
     1141 taatgctgtg ggacactgca ggtcaagagg agtttgatgc gataacgaag gcctactatc
     1201 gaggagccca ggcttgtgtg cttgtgtttt ctaccacaga cagggagtct tttgaagcaa
     1261 tttccagctg gagagaaaag gtagtagcag aagttggaga tataccaacc gcgcttgtac
     1321 agaacaagat cgatcttctg gatgattcat gtatcaaaaa tgaggaagct gagggactgg
     1381 ccaaaaggct aaagctgaga ttctacagga cgtctgtgaa ggaggatcta aatgtgaacg
     1441 aagtttttaa atatttggct gagaaacacc tacaaaaact caaacaacaa gtagcggacg
     1501 agccggagca gacacattcg agcagtaaca agataggtgt ctttaatgcg tctgttggaa
     1561 gtcacttggg tcagaattca agttccctta acggtggaga tgtcatcaac cttagaccta
     1621 acaaacaaag gaccaagaaa accagaaatc ctttcagcag ctgtagtgta ccctaattgt
     1681 tttagggagg agaaagctga attgcaccgt gcagttaacc gcaccgagtg tggggtgtcc
     1741 cgagtgtgtc ggcaggcctc gcacctcgct ctgaaagctg acattgtaat gttgctctgc
     1801 cgtgcttctc agaatgtaga cggagccctc tgctggaaat tactgccctg tgaactcact
     1861 ctagtttttt acattagacg aagcttctcc tgtttttgaa ggaacaccat aggaaatgtc
     1921 aaaaacaggt tttgctgaat ttgcaacgct gaacactaga acaacatgac taactacatt
     1981 ggtaactgtt taccctgatg gaccaaggag agatggccgg cattcttgtt ctgaaactgg
     2041 tcgtcgagct tttctggaat gttcaacctg aatgcttaaa gaacatactg caggggaaac
     2101 gcggcctcct gagacagcag cacagcgcgt gtcgtcagtg gtactcgtgc aatatctgta
     2161 aagtgtggac tatggggtga gcatacagac gcctggctgg agcaggtctg tgccctggga
     2221 aagggtgtgc agattctaat tcactccctc agacgaccat tgtgtatgtt tctggtctca
     2281 catgagccct cagacatact ctacagaacg aatttctaca aaagtgtacc gtgtgccaaa
     2341 cactacccct aatttttaca gtgctttcct attagaattt gcatttacgg catcttgtag
     2401 aggcctgtga cagtgtaggt gaagggaatg taaacatctg aatgttaggg cctctccctc
     2461 aggggagttc tcccagcgtc ttctcagggc cgccgtaagc acagtgggct ttatgctgtt
     2521 atgtgcttag cttgtgtcca gtacacacag cagcctgcgg ccactcagaa gacctgtgga
     2581 gcatgcgcac actagcttct gtcaggctgc taacttgaga ccaaactctg aacttcggag
     2641 ctgaagggac ccgtcttctc agagtgacgg tctttggccc tgatccaggt tagagatttc
     2701 ctgaagcctt gcagctcgtc aggcagccct ttgctcacac gtggtatagc cttcaccact
     2761 agtgcttcag tttttccgtg gccttgggtc tacatggcac cttatcaaga cctatcggtc
     2821 agaggcatct gcaaggatgt gacctagtgt gtaatgaagg tcggaagcat gtgagtcgga
     2881 ctcacactgc ctgccaaaga gatgatgtca tgaactccac taaaaactct tcatcagtag
     2941 ttttgttttt aaagtatcga taacccgttt ccagagtctt ggttttcatg tggctttaaa
     3001 atatatgaaa gtgatttttc ttggaatata tgctataaag tccttttttt tttaactaaa
     3061 atataaaata gttcttgtat ttctcttgtc ccttttttaa gttaccctga cacaccaccc
     3121 catgctgccc cgattcctgg tgtgagcaca gaggttccgg cgtccttgct ccacggtggc
     3181 ccacgcttgc ccttcacact acatcccaag ccggccacgc aggccgctcc tctgtgtact
     3241 ctgctgttag agcccccact gccggggtga ggtggggact tggttcccca cagtggtgct
     3301 gctgtgagcc accattgttc tctttgaata cagactcttc agattttgca ctaatttgtt
     3361 ggcaaataaa tgagttgcca cttttaatga cattggcaga aaatgcattc cttatagagt
     3421 attgtagctt tcttcatagt cactaaatgc atggtagaaa ggcgtgtggt atgtctctgt
     3481 aaaagtgtct gctgatggct gcactttcct taatatttgt tcttttgtct tcccccttcc
     3541 ccaaccccct caccccacca caccccagag ctgaggacca aacccagggc cttgcgcctg
     3601 ctaggcaagc gctctaccac tgagctaaat cccaacccct tccctactat ttgtaacaga
     3661 agtttatgtg ttttgcttta tccatttttt taatggaagt gtttgttaca catttgaact
     3721 tttactttgc attactgtat tttataccta actttaaaag gtctaaaatc atccacaagt
     3781 aatattaatt tatcattgta gtcaattctg agacctttag gtcacattgt gggtttcttc
     3841 tgtaaccgta acgcttaaga acttcagtat gaaattctag agacgccccc tgtcgatgaa
     3901 cgctgtccag gacttggggc catgggacag ttgtgctctg gttaactgtt ttgcagtgtc
     3961 accgttttta gtgtcaggca cgtagctgtg gagtagttga cgtatctaag agttcctcag
     4021 gtttcttcca gtctctgcct gtgaactaaa tagtacataa gacagcccac atacggccgt
     4081 gcaaataaaa gcaggttgaa ctgctgcttt ttgtccactc aaggtgacag cacacgtgga
     4141 gatttcaaat tacagctagc gctaccacag agaggatgtg tgaccccttc cctgccagtg
     4201 aagtcgggca gtgcagagaa ctcagggtgt ggccccactg tgcctgccac tagggaccag
     4261 ggtctttgag aggattagga tgagctgttg gccttttagc ctgatgtagc accctgaagt
     4321 gctcttgtaa tctgagatgt ctcttgcctt ccgaggattc tggtgactgc tatgaggcga
     4381 gcacctcaca gagacttggt cacagccagc gctgatatgc agggagccca taagggggtg
     4441 cgggggtggg gggtgggggg ctgtgacctc cacagcctta ggtgagcagg tgactttacc
     4501 cacactaaca gctactacaa acatcatgtt gctcttaaga gtttcacata caaaacctaa
     4561 aaatccgtcc tagaaatgaa gttatctgca cacaggtgaa cgaaacccca gcagggtctg
     4621 cccagcagcc agcccagata ggaggatgat ttggccacaa gagtttttgt tactactact
     4681 ttttctgttg tctcttgaaa tatctatagc aggatgttga taaaatggta ttttaaaaat
     4741 aaaatctttg aatcaaagga aaaacttaac ccctcctata tttttgttac taataaataa
     4801 tgcttttgta aatccgaatg gaaaactact tgtatgtatt catattgagt ggtacttaat
     4861 acctttgggg ttaatttaaa aatgtactac ttgattaaaa tttccaaaaa gataaattcc
     4921 aataaccaaa aagaataaag catttcaaag ctagaa
//
