LOCUS       XM_039078713             662 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus RAB21, member RAS oncogene family
            (Rab21), transcript variant X2, mRNA.
ACCESSION   XM_039078713
VERSION     XM_039078713.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051342.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..662
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..662
                     /gene="Rab21"
                     /note="RAB21, member RAS oncogene family; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 3 ESTs, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 180
                     samples with support for all annotated introns"
                     /db_xref="GeneID:299799"
                     /db_xref="RGD:1303150"
     CDS             272..637
                     /gene="Rab21"
                     /codon_start=1
                     /product="ras-related protein Rab-21 isoform X1"
                     /protein_id="XP_038934641.1"
                     /db_xref="GeneID:299799"
                     /db_xref="RGD:1303150"
                     /translation="MAAAGGGAAAAAGRAYSFKVVLLGEGCVGKTSLVLRYCENKFND
                     KHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGAILVYDVTDE
                     DSFQKVKKLGQRITENVGK"
ORIGIN      
        1 acgtgacgcg gagtgtgacg taggaggaag gagacgccat tagagggagg agaggtagct
       61 ctctcctagc ctcgggtccc tgacgtggta gccggggccc ttcattctgg gactttctct
      121 cggccctcgc aggcctcgcc cgctggagga cgcggcgggc accgggctcg gcggggcgtg
      181 agagagccgg gcccgggagg agcgggcgcc gcggcggcgg tggtgcgggg ctcggcgcgg
      241 cgctgggctc gggcggcggg gcagcggcgg gatggctgcg gccggcggcg gggcggcggc
      301 ggcggcgggc cgagcctact cttttaaggt ggtgctgctc ggagaaggct gcgtggggaa
      361 gacgtcgctg gtgctgcgct actgcgagaa caagttcaac gacaagcaca tcaccaccct
      421 gcaggcttct ttcttaacaa agaagttaaa tattggtggg aagagagtaa accttgctat
      481 atgggataca gccggtcaag agagattcca tgcattgggt ccaatttact accgagattc
      541 gaatggagct attttagttt atgatgtaac agatgaagat tcttttcaga aggtaaaaaa
      601 actgggtcaa agaattacgg aaaatgttgg gaaatgaaat ctgtttgtgt atagttggta
      661 ag
//
