LOCUS       XM_039096347             668 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S8
            (RGD1566369), mRNA.
ACCESSION   XM_039096347
VERSION     XM_039096347.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051352.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039096347.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..668
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..668
                     /gene="RGD1566369"
                     /note="similar to ribosomal protein S8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 ESTs, 17 Proteins, and 96% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:291353"
                     /db_xref="RGD:1566369"
     CDS             16..642
                     /gene="RGD1566369"
                     /codon_start=1
                     /product="40S ribosomal protein S8-like"
                     /protein_id="XP_038952275.1"
                     /db_xref="GeneID:291353"
                     /db_xref="RGD:1566369"
                     /translation="MGISRNNWHKRRKTGGKRKPYHKKRKYELGRPAANTKIGPCRIH
                     TVRVRGDNKKYRALRLDVGNFFWGSECCTCKTRTIDVVYNASNNELVRTKTPVKNCLV
                     LIDSAPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS
                     LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK"
ORIGIN      
        1 agccagcgcc gagcgatggg catctctcgg aacaactggc acaagcgccg caagaccggg
       61 ggtaagagaa aaccctacca caagaagcgg aagtatgagc tgggacggcc ggccgccaac
      121 actaagattg gcccttgccg catacacaca gtccgagttc gaggagacaa taagaagtat
      181 cgtgctctga gattggatgt ggggaacttt ttctggggct ctgagtgttg tacttgcaaa
      241 acaaggacca ttgacgttgt ctacaatgca tccaataacg agctcgtccg caccaagacc
      301 ccggtgaaga actgccttgt gcttattgac agcgcaccgt accgacagtg gtacgagtcc
      361 cactatgcac tgcccctggg ccgcaagaag ggggccaagc tgactcctga ggaggaagag
      421 attttaaaca aaaaacgatc aaagaaaatt cagaagaaat atgatgaaag gaaaaagaat
      481 gccaaaatca gcagtcttct ggaggagcag ttccagcagg gcaagcttct cgcctgtatt
      541 gcctcaagac caggccagtg tggcagagca gatggctatg tgctcgaagg caaggagctg
      601 gagttctacc tgcggaagat caaagcccgg aaaggcaaat aaactgtcat aactcgtgta
      661 ataaaggt
//
