LOCUS       NM_001400770            4397 bp    mRNA    linear   ROD 31-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 5 open reading frame
            24 (C17h5orf24), mRNA.
ACCESSION   NM_001400770 XM_003751644
VERSION     NM_001400770.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 4397)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000017.1.
            
            On Apr 7, 2023 this sequence version replaced NM_001400770.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228424.1, SRR26643292.57018.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840110, SAMN12840117
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-226               JAXUCZ010000017.1  8937901-8938126     c
            227-4397            JAXUCZ010000017.1  8928209-8932379     c
FEATURES             Location/Qualifiers
     source          1..4397
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p14"
     gene            1..4397
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /note="similar to human chromosome 5 open reading frame
                     24"
                     /db_xref="GeneID:498701"
                     /db_xref="RGD:1566359"
     exon            1..226
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /inference="alignment:Splign:2.1.0"
     exon            227..4397
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..799
                     /gene="C17h5orf24"
                     /gene_synonym="RGD1566359"
                     /codon_start=1
                     /product="UPF0461 protein C5orf24 homolog"
                     /protein_id="NP_001387699.1"
                     /db_xref="GeneID:498701"
                     /db_xref="RGD:1566359"
                     /translation="MMHPVAGGNPAFCGPGKPPCLSDDAAMRAADQFDLYSSQQSKYS
                     HTVSHKPMLCQRQDPLNEAHLQPTSGRNTEIKDELKKKKNLNRSGKRGRPSGTTKSAG
                     YRTSTGRPLGTTKAAGFKTSPGRPLGTTKAAGYKVSPGRPPGSIKALSRLADLGYGCG
                     TAAFPYPMMHSRVVHGVQETSGEVKPPSE"
ORIGIN      
        1 attccggggc tgtggcggtc tcttcctccc gcgtccgggg cccgcggtga gggctcttgg
       61 gagtcgggcg ctggcgtggg cctcgccgcc gccgccgccg gccctctgcc gtgactggac
      121 tgggccgcac ggagagggcg cggccggact gaacggaacg ggcgggggct ttcctgccta
      181 tgggcggccc ctgggcgctc tgagggccgg gctccgagcg gccgaggaaa tgatgcaccc
      241 ggttgcaggc gggaacccag cgttctgcgg gcctggcaag cctccctgcc tcagtgatga
      301 cgccgccatg agagccgctg atcagtttga tctgtactcc tcccagcaaa gcaagtacag
      361 ccacacagtc agccacaaac ccatgctctg tcagaggcaa gacccattaa acgaagcaca
      421 cttgcagcct accagtggca gaaacacaga gataaaagat gaactaaaga aaaagaaaaa
      481 cctcaatcga tctggtaagc gaggccggcc ttcgggaacc accaagtcag caggataccg
      541 gaccagcaca ggcagacccc tgggaaccac caaagcagct ggatttaaga ccagtccagg
      601 caggcctctg ggtacaacca aagctgcagg atacaaagtc agcccaggca ggcctccagg
      661 tagcattaaa gctctgtccc gtcttgcaga tcttggttat ggctgtggca ctgctgcctt
      721 tccttaccct atgatgcaca gtagagtggt tcacggggtt caggaaacga gtggtgaggt
      781 caagccaccc agtgaatgag cgagacagga gagcacgtgc taggagcaaa ttgttagtca
      841 ccccaaagct tcttgcttta atttgacata atcataccac gtggactccc cagttctgtt
      901 tctgtttgct ttccctcacc ccgcacttct ttttctttct ttttagctca gaagctgcca
      961 caattgagag gtgcactttg ggcaggagta gtacattgtg tctgtgttgt acacggttca
     1021 caggacagga cactcagctc agtcgtctat gctttccctt tgggctgttc taagtggact
     1081 ccttttactt gtgagtaatc cagagcgagg cactgtaact gaagcgggga gcagcaacta
     1141 gtgagcagat gggcggggaa ggctgtgaaa taagacacag ctctctggat gctttggaac
     1201 ttaaaacaca gcttcttctt tattgattcg catggcatta gtgatcatca ttcctaaagc
     1261 actgtgcagt gtctgcctcg aagagagcat agttacaggg tgtgtgtttt cagttgccta
     1321 agagcatatg caccaaacac tacaaacagc tcaaaccctt gagtacgtca gaaacctgca
     1381 cagcatattt aatatacaag aaaaaagaac ccttagaagt ctgcatgtaa ctatagtcat
     1441 tctgttttgt gtttcatata cttagtatta tattttaaaa catttattac tattgttcat
     1501 ttatttaaaa aaattttttt ttttttagtt tttctgcgta attgttatta cacttcatta
     1561 gtacttaatt gcattttcag gtttatacct accaaaggac acaaattgag tggtcaactg
     1621 caaaattggt ctaagcagga agcagtgtcc tggctgtcag gacccaaata ccaataaatg
     1681 taacttggta tgcgcgaaac ctgtgaaatg agcgctgggt agcataaaaa tggcagcatg
     1741 gctccaggat gaccgtttct tccaaaagaa ggctccctgg tgcggcttgc tttagacaca
     1801 gtgtagaaaa gtcaagtact gggcatgaag gtatactcat ttagggtaat ctttggaaat
     1861 gtttcctgtt aatacacatt ttatttattt tgaatttgtt ctgagtaaac tgttataaac
     1921 tttaagattg aaaagctttc cgtgggtcag gtatggaggc ccaggaattt gattccagca
     1981 tttgggaggc tgaggcaggc agagctctga gtgtgtgagg tctacatagt gccaggacag
     2041 ccaatgctag gtagagagac cctatcttta aaaaaacaac aaagaaaagc ttttactgaa
     2101 cttaaaaaat tatgtttttt acttgcattt taaatgcttt tgagaataaa atgtagattt
     2161 aaaggactta aaaactttaa aaataatcag aaatttaaaa gggacacacg tactggttgg
     2221 ttaggcttgc tctcagtcca tgcaaactga ctgtatgtaa ataccatgtt tcagacctct
     2281 gtcgggggac aagcagcaaa tctcaggtgc cccatgatag ctgacacaac agctgggcat
     2341 ccgctcctgc agtagtacgt gctttattat gtgtggagac tgtaacctca gcagtaccag
     2401 cttcgcacaa accacagggg acagtgagca atgctggacg accactgaac cagcctagaa
     2461 tataaaactg aatgacttat tcagaacagt gtaacttctg gcacatgcag atgcttgtct
     2521 tcattggcgt gttcatctgt cacgtagctg tttctgaagt tgttcagcag ctggctgttg
     2581 agaattcctt gcaaggctag ttcctgagga cagttgaaat agtctagtct agaatgtcaa
     2641 ggacttgggt gcatgttgtg tttcctcatg agtctacatg gcatcctttc agtttgattt
     2701 ccttcctgat tttctacctt gtcatttctt cttgcccttt cccacaccta tccccttccc
     2761 tcagctctcc agcacatcta ctcagtggtg ctgtgctgtg tgtcagaaga tagagtgggt
     2821 ggcttgtata tgttgatgac agtgtttgta ttaggagctt gatcccagga acaggggtgg
     2881 atggatggat ggctacagtt gtgagtggat gacgtcactt aggaaactgc gagcagcact
     2941 tgggatatga aatgtgtgca ctggtgaaca cctgattcta cttttctccc tgtggacagt
     3001 ttaccagtgc cacgttggag aggcacggtg aggacaggaa ggaagtcttc acataaaaat
     3061 atttttgctt ctacatgatc taaagactgc attctgcatc ttttgtaaca tggtcctttg
     3121 tcatgacaga cactgaaata gcatgtgaaa cattgcctag atgccagtat attcagtcgg
     3181 ggaaaactgt tgtcccctac ccccacccca ctgtataatt gttccttaaa aggtaaattg
     3241 ctaattttat actgtgtgat tctattcttc ataaataggt ttcactattc tatattaaac
     3301 tttgtcagaa aatgatctac tattcaagta agtttgtttt acttttttct gaaaaggata
     3361 ttttacatgc cttatttatt attgttatca aaacaaataa ggggtcaata cagatgaaaa
     3421 tttcactttc cacagctatc accttgccta attaatcttt agtatggggt gattttgata
     3481 ctatctttgg agttttgcac tggatattta aaaatatata ttggcacaat atattgaaaa
     3541 attaaatagt atttggttta atttttaata tttgaaacat tttttaatta gtgtttaaat
     3601 cagactaaca attctttgta tttttaatta cttttttaaa agggacatct gaaaagtggt
     3661 atttattcat tccaaactgg tgtttgtgtg aatttacata tattttcatg aaatatgagt
     3721 aggatttctt tgaggtaaaa tctggatcca tttattatca ggttaaagac gcttcatcca
     3781 gtgtaataat aaccacagtg tgtaagttta aatggtgaac ttcttcatgc tttaagaagc
     3841 tttaagagaa cagttcaggg gatactaaga tgattgctct gtcagttcct tgtctatatg
     3901 cagtaaaact ttatgatccg ttacagcagt gtaacagttc acaacagtct tgggcataaa
     3961 aagttttgat gctcttttaa tctgtctgtt ctagcataat gactgcgttc aaactcttaa
     4021 gatgtatcta aatatttgct tttctccctt ttccttccaa gtagacagac ctgtgctctc
     4081 acatacaatg tatttaagtt tttagaagtg atgctgtagt aagtcagtcg tgtgatttaa
     4141 tcaggccact cttgattctt tgattcacag tttccttttt ccacagacaa ttatgagaaa
     4201 caattaccag ttaactgata ataagcacgt tgtcctctgc tgtaaaaagt ctgaatagat
     4261 actgtgtatg tttccatgtc catgaactta agctactcgt gtgcagttat gtgtatggaa
     4321 tggagtagtg ttcatgattt gtatctacat catcatatgg atgtatattt attaataaag
     4381 tcatcacttt aaaacca
//
