LOCUS       XM_017590479             592 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to probable nocturnin protein
            (RGD1566289), transcript variant X1, mRNA.
ACCESSION   XM_017590479
VERSION     XM_017590479.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_017590479.3.
            
            On Jan 21, 2021 this sequence version replaced XM_017590479.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..592
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..592
                     /gene="RGD1566289"
                     /note="similar to probable nocturnin protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 13 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:365402"
                     /db_xref="RGD:1566289"
     CDS             135..569
                     /gene="RGD1566289"
                     /codon_start=1
                     /product="prostatic steroid-binding protein C1-like
                     isoform X1"
                     /protein_id="XP_017445968.2"
                     /db_xref="GeneID:365402"
                     /db_xref="RGD:1566289"
                     /translation="MRLSLCLQTILVVCCYEANANHVCEAVKHEIITFILKREEELKT
                     ELENYDAPLESIEAKLKVKRCVDQMSYEDRCRVSGALVWSLYFSLSEVNLSFCGGHMS
                     GWNHGTSMVQEHTADQSSVVNSAWGICLLLEFHPRINTPVAF"
ORIGIN      
        1 aagccttgtg agctgccact tgcctgaagg ctggaccagt gaacctcacc ttgtataaat
       61 atccctggtc cccacaggct ctgggagagt ccatttgctc accatttgct aagtctaaaa
      121 gcaaactgag caccatgagg ctgagcctat gtcttcagac cattctggtt gtttgttgct
      181 atgaagctaa tgccaaccat gtctgtgaag ctgttaagca tgaaatcata accttcatac
      241 taaagaggga agaagaactg aagacagagc ttgagaacta tgatgcacca ctagagtcca
      301 ttgaagcaaa actgaaggtg aagagatgtg tagaccagat gagctatgaa gacagatgtc
      361 gagtatcagg agcgctggta tggtcacttt acttttcact ctcagaagtt aacttgtcat
      421 tctgtggggg acatatgagt gggtggaatc atgggacatc catggttcag gaacacactg
      481 ctgatcagag ttcagttgta aacagtgcct ggggtatctg cctccttcta gagtttcacc
      541 ctagaatcaa cactcctgtg gctttctaat aaacacaaat agggccctac aa
//
