LOCUS       XM_006257564             697 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1700001F22
            (RGD1566225), mRNA.
ACCESSION   XM_006257564
VERSION     XM_006257564.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257564.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257564.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..697
                     /gene="RGD1566225"
                     /note="similar to RIKEN cDNA 1700001F22; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:317584"
                     /db_xref="RGD:1566225"
     CDS             141..647
                     /gene="RGD1566225"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_006257626.1"
                     /db_xref="GeneID:317584"
                     /db_xref="RGD:1566225"
                     /translation="MGKDSKVRPKVNVSPYVHFMMDFRNQMREQQPNTYYDFTEFSRK
                     CSEKWKTISKKEKKKYEALAKRDKDRYQREMRNYTGPRRERRRRDADAPRKPPSSFLL
                     FSQDHFEEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY
                     YHQCQRGK"
ORIGIN      
        1 actgaaaagg ctgggccctg gctgaggtgc acacagaggg aagatttcac cccatggagg
       61 acactgtcta ggctgctcct gtagtgaaga ccattcgctg ctctccaatc agcaggatca
      121 gaattcgagc ttctataaac atgggaaaag acagcaaagt aagaccgaaa gtgaacgtct
      181 ctccttatgt ccattttatg atggacttca gaaatcaaat gagggagcaa cagccaaaca
      241 cctattatga ttttaccgaa ttttctagaa agtgttctga aaagtggaag accatctcaa
      301 agaaggaaaa aaagaagtat gaagccctgg ccaagcgcga caaagatcgg taccaacgtg
      361 aaatgagaaa ctatactgga ccgagaaggg agagaaggag gagagatgca gatgcaccgc
      421 ggaagccccc atcctcgttc ctgctcttct cccaggacca ttttgaggag ataaaagaac
      481 aacacccaaa ctggactgtg gcgcaggtgg ccaaggctgc agggaggatg tgggccaggt
      541 gttcagaagc ggataaaatc ccctacgagg agagggctgc ggttctgagg gccaagtacc
      601 ttgaagagcg ggaggcctac taccaccaat gccagcgcgg gaagtaaaac ttcaagggat
      661 ggggcaaacc caatctgaaa caataaacct cattcaa
//
