LOCUS       XM_039100139             608 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S9
            (RGD1566136), mRNA.
ACCESSION   XM_039100139
VERSION     XM_039100139.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100139.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..608
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..608
                     /gene="RGD1566136"
                     /note="similar to 40S ribosomal protein S9; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 43 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:300278"
                     /db_xref="RGD:1566136"
     CDS             16..600
                     /gene="RGD1566136"
                     /codon_start=1
                     /product="40S ribosomal protein S9-like"
                     /protein_id="XP_038956067.1"
                     /db_xref="GeneID:300278"
                     /db_xref="RGD:1566136"
                     /translation="MLVARSWVCHKTYVTPRRPFEKSRLDQELKLIGEYGLRNKHEVW
                     RVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIVVLDEGKMKLDYILGLKI
                     EDFLERRLQTQVFKLRLAKSIHHAHVLIRQRHIRVRKQVVNIPSFIVCLDSHKHIDFS
                     LRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED"
ORIGIN      
        1 cctagcctag tcaacatgct ggtcgccaga agctgggttt gtcacaaaac ctatgtgacc
       61 ccacggagac ccttcgagaa atcgcgtctc gaccaggagt taaagttgat tggagagtat
      121 ggactccgga acaaacatga ggtgtggagg gtcaaattta ccctggcgaa gatccgtaag
      181 gctgcccggg agctgttgac gctggacgag aaggatcctc ggcgtctgtt tgaaggcaac
      241 gctctgctga gacgacttgt tcggattgtg gtgctggatg aaggcaagat gaagctggat
      301 tacattctgg gcctgaagat tgaggatttc ttggagagaa ggctgcagac ccaggtcttt
      361 aagctgcgcc tggccaaatc tattcaccat gcccatgtgc tcatccgcca acgtcacatc
      421 agggtccgca agcaggtggt aaacatccca tctttcattg tttgtctgga ctctcacaag
      481 cacattgact tctccctccg ttctccttat ggtggtggcc gcccaggcag agtgaagagg
      541 aagaatgcca agaaaggcca gggtggtgct ggagctggtg atgatgagga agaggattaa
      601 ttaatacg
//
